Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_N05
(475 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43821| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_52986| Best HMM Match : zf-C2H2 (HMM E-Value=0.0042) 33 0.16
SB_48401| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_37892| Best HMM Match : rve (HMM E-Value=2.1e-16) 32 0.21
SB_46895| Best HMM Match : rve (HMM E-Value=1.6e-25) 32 0.28
SB_857| Best HMM Match : Mago_nashi (HMM E-Value=0) 31 0.49
SB_30264| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.85
SB_28108| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_3377| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 29 1.5
SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05) 29 2.0
SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_25029| Best HMM Match : Collagen (HMM E-Value=0.38) 29 2.0
SB_8719| Best HMM Match : SEA (HMM E-Value=4.7e-11) 29 2.0
SB_12530| Best HMM Match : I-set (HMM E-Value=3e-05) 29 2.6
SB_9975| Best HMM Match : 7tm_2 (HMM E-Value=1.9e-38) 29 2.6
SB_57147| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_54361| Best HMM Match : DUF765 (HMM E-Value=6.4) 28 3.4
SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_44613| Best HMM Match : Glyco_hydro_53 (HMM E-Value=0.79) 28 3.4
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_55828| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_49822| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_6010| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_3843| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_55897| Best HMM Match : RVT_1 (HMM E-Value=5.3e-37) 27 6.0
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 27 6.0
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_27207| Best HMM Match : eIF-5a (HMM E-Value=3.1e-15) 27 6.0
SB_25588| Best HMM Match : PAE (HMM E-Value=1.5e-31) 27 6.0
SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028) 27 6.0
SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30) 27 6.0
SB_54959| Best HMM Match : TatC (HMM E-Value=0.44) 27 6.0
SB_51753| Best HMM Match : rve (HMM E-Value=8.7e-30) 27 6.0
SB_46176| Best HMM Match : rve (HMM E-Value=8.7e-30) 27 6.0
SB_27807| Best HMM Match : C2 (HMM E-Value=0) 27 6.0
SB_27401| Best HMM Match : SCP (HMM E-Value=9e-23) 27 6.0
SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29) 27 6.0
SB_12900| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_9603| Best HMM Match : Extensin_2 (HMM E-Value=0.0058) 27 6.0
SB_7302| Best HMM Match : DUF910 (HMM E-Value=2.2) 27 6.0
SB_52001| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_38379| Best HMM Match : GspM (HMM E-Value=1.4) 27 7.9
SB_19076| Best HMM Match : HECT (HMM E-Value=0) 27 7.9
SB_1476| Best HMM Match : RVT_1 (HMM E-Value=5.49309e-43) 27 7.9
SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 27 7.9
SB_13893| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_43821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 114 PFIPTSDELPVLEPAVMWGALPDSVSLARPQPSETHNVSPAPALQRLL 257
P PTS+E P + PAV+ A D+V+ A P P T + QRL+
Sbjct: 116 PQAPTSEEKPTIPPAVL-PAKSDNVATAAPSPITTRSGRIVKPPQRLI 162
>SB_52986| Best HMM Match : zf-C2H2 (HMM E-Value=0.0042)
Length = 623
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +3
Query: 120 IPTSDELPVLEPAVMWGALPDSVSLARPQPSETHNVSPAPALQRLLTASTTGPPP 284
I + ++ P L V GA P S PQ T V+P P L + T + + PPP
Sbjct: 455 IHSHEDFPTLGGGVGGGAKPKSTPYTTPQGVST--VNPPPGLSLVQTVAPSQPPP 507
>SB_48401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 694
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +3
Query: 120 IPTSDELPVLEPAVMWGALPDSVSLARPQPSETHNVSPAPALQRLLTASTTGPPP 284
I + ++ P L V GA P S PQ T V+P P L + T + + PPP
Sbjct: 422 IHSHEDFPTLGGGVGGGAKPKSTPYTTPQGVST--VNPPPGLSLVQTVAPSQPPP 474
>SB_37892| Best HMM Match : rve (HMM E-Value=2.1e-16)
Length = 824
Score = 32.3 bits (70), Expect = 0.21
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +3
Query: 114 PFIPTSDELPVLEPAVMWGALPDSVSLARPQPSETHNVSPAPALQRL 254
P PTS+E P +PAV+ A D+V+ A P P T + QRL
Sbjct: 775 PQAPTSEEKPTTQPAVL-PAKSDNVATAAPSPITTRSGRIVKPPQRL 820
>SB_46895| Best HMM Match : rve (HMM E-Value=1.6e-25)
Length = 329
Score = 31.9 bits (69), Expect = 0.28
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 114 PFIPTSDELPVLEPAVMWGALPDSVSLARPQPSETHNVSPAPALQRLL 257
P PTS+E P PAV+ A D+V+ A P P T + QRL+
Sbjct: 280 PQAPTSEEKPTTPPAVL-PAKSDNVATATPSPITTRSGRIVKPPQRLI 326
>SB_857| Best HMM Match : Mago_nashi (HMM E-Value=0)
Length = 900
Score = 31.1 bits (67), Expect = 0.49
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +3
Query: 12 ENDSSCEQSSLLTELSLDAFDNTKSDNDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVS 191
++D +SS L L D D+ K+D+D+DD ++ DELP + P +G +P
Sbjct: 741 DDDDDSSESSDLPLLHSDFEDDDKNDSDVDDHDNE-EDDHDELPFMGP---FGRVPHPTE 796
Query: 192 L 194
L
Sbjct: 797 L 797
>SB_30264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 689
Score = 30.3 bits (65), Expect = 0.85
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 202 PNLRKRIMYRRHRLYNVYSRHRRRDH 279
PN+ KR++ ++ RLYN+ + RR+DH
Sbjct: 224 PNV-KRMIKKKQRLYNLQRKSRRKDH 248
>SB_28108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1558
Score = 29.9 bits (64), Expect = 1.1
Identities = 24/90 (26%), Positives = 37/90 (41%)
Frame = +3
Query: 9 QENDSSCEQSSLLTELSLDAFDNTKSDNDIDDGNSPFIPTSDELPVLEPAVMWGALPDSV 188
+E+ CE +L+ + + N D +++ + TS LPV P V P
Sbjct: 29 EEDSGGCEVDNLMNQKTNRKQKNPAEDEQVENTKLSQVATSTNLPVQNPGVP-SVGPKGP 87
Query: 189 SLARPQPSETHNVSPAPALQRLLTASTTGP 278
RP P N +P LLT + +GP
Sbjct: 88 E--RPIPVSLTNGAPQ---SPLLTRAPSGP 112
>SB_3377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 29.9 bits (64), Expect = 1.1
Identities = 24/90 (26%), Positives = 37/90 (41%)
Frame = +3
Query: 9 QENDSSCEQSSLLTELSLDAFDNTKSDNDIDDGNSPFIPTSDELPVLEPAVMWGALPDSV 188
+E+ CE +L+ + + N D +++ + TS LPV P V P
Sbjct: 39 EEDSGGCEVDNLMNQKTNRKQKNPAEDEQVENTKLSQVATSTNLPVQNPGVP-SVGPKGP 97
Query: 189 SLARPQPSETHNVSPAPALQRLLTASTTGP 278
RP P N +P LLT + +GP
Sbjct: 98 E--RPIPVSLTNGAPQ---SPLLTRAPSGP 122
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 196 HDPNLRKRIMYRRHRLYNVYSRHRRRDHPHR 288
H P+ I+ RHR + Y+RHRR H HR
Sbjct: 177 HHPSTIIIILRHRHRQH--YNRHRRHHHHHR 205
>SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05)
Length = 1604
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +3
Query: 120 IPTSDELPVLEPAVMWGALPDSVSLARPQPSETHNVSPAPALQRLLTASTTGPPP 284
+PT LP+ P LP + L RP P+ TH + P L+R + A T P P
Sbjct: 474 LPT--HLPLERPVPAVTRLPTPLPLERPVPAVTHLPTDLP-LERPVPAVTRLPTP 525
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +3
Query: 120 IPTSDELPVLEPAVMWGALPDSVSLARPQPSETHNVSPAPALQRLLTASTTGP 278
+PT LP+ P LP + L RP P+ T +P P L+R + A T P
Sbjct: 378 LPT--HLPLERPVPAVTRLPTHLPLERPVPAVTRFTTPLP-LERPVPAVTRLP 427
>SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 244 KAGAGDTLCVSEGWGRARLTLSGR 173
+ GAGD +C SEG G + T+S R
Sbjct: 192 EGGAGDDMCSSEGAGNDQSTISAR 215
>SB_25029| Best HMM Match : Collagen (HMM E-Value=0.38)
Length = 388
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = -1
Query: 208 GWGRARLTLSGRAPHMTAGSNTGSSSLVGIKGEFPSSISLSDFVLSNASKDNSVNND 38
G R RLTL R +T G +L G+ P D LSN D + ND
Sbjct: 67 GQRRRRLTLGQRRRRLTLGQRRRRLTLGNDGGDLPLGNDGGDLPLSNDGGDLPLGND 123
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = -1
Query: 208 GWGRARLTLSGRAPHMTAGSNTGSSSLVGIKGEFPSSISLSDFVLSNASKDNSVNND 38
G R RLTL + G++ G L G+ P D LSN D + ND
Sbjct: 85 GQRRRRLTLGNDGGDLPLGNDGGDLPLSNDGGDLPLGNDGGDLPLSNDGGDLPLGND 141
>SB_8719| Best HMM Match : SEA (HMM E-Value=4.7e-11)
Length = 905
Score = 29.1 bits (62), Expect = 2.0
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +3
Query: 183 SVSLARPQPSETHNVSPAPALQRLLTASTTG----PPPQDLVKNIYSNQRVYIDQNASPR 350
SV+ PS TH VSP A Q + + S TG P ++V N+ V ASP
Sbjct: 129 SVNETYASPSATHAVSPPSATQTIASPSATGAVVLPSATEIVAQYSVNETV-----ASPS 183
Query: 351 ARSAVS 368
A ++
Sbjct: 184 ATQTIA 189
>SB_12530| Best HMM Match : I-set (HMM E-Value=3e-05)
Length = 127
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 66 AFDNTKSDNDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQP 209
A N D + +G+ P P D P+V+W PDSV L P
Sbjct: 4 AIINASRDQNAIEGD-PLTPICDVDGYPVPSVVWSKTPDSVQLPATSP 50
>SB_9975| Best HMM Match : 7tm_2 (HMM E-Value=1.9e-38)
Length = 1101
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 127 RAMNSQYWSQLSCGALCQTALVLHDPNLRKRIMY 228
+ + S YWS SCG C L+ H + +Y
Sbjct: 268 KMLRSSYWSIKSCGLRCSHFLITHAGETKTTAVY 301
>SB_57147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +3
Query: 12 ENDSSCEQSSLLTELSLDAFDNTKSDNDID---DGNSPFIPTSDELPVLEPAVMWGA 173
+ +S ++ L ++ L F +++D DG F S ELP E VMWGA
Sbjct: 327 QQHTSTRRNKLRSQPDLVEFSKENFASNLDESYDGPFSFSGISGELPNKENTVMWGA 383
>SB_54361| Best HMM Match : DUF765 (HMM E-Value=6.4)
Length = 148
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 201 PQPSETHNVSPAPALQRLLTASTTGPPPQDLV 296
P PSE + L +++T +T PPP ++V
Sbjct: 112 PPPSEMVTRTAGSTLSKMVTRTTGSPPPSEMV 143
>SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1251
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 202 PNLRKRIMYRRHRLYNVYSRHRRRDH 279
PN+ KR++ R+ RLYN+ + R+DH
Sbjct: 494 PNV-KRMIKRKKRLYNLQRKSGRKDH 518
>SB_44613| Best HMM Match : Glyco_hydro_53 (HMM E-Value=0.79)
Length = 696
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +3
Query: 12 ENDSSCEQSSLLTELSLDAFDNTKSDNDID---DGNSPFIPTSDELPVLEPAVMWGA 173
+ +S ++ L ++ L F +++D DG F S ELP E VMWGA
Sbjct: 327 QQHTSTRRNKLRSQPDLVEFSKENFASNLDESYDGPFSFSGISGELPNKENTVMWGA 383
>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 63 DAFDNTKSDNDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQPSETHNVSPAP 239
+A + SD+D D + P PT + P+ V+ LP+ V+ P+P T SP P
Sbjct: 503 EAIKESDSDSDTSDSSPPTSPT-QQSPLETTPVL--PLPEKVT---PEPGSTTPPSPPP 555
>SB_55828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 154 GSNTGSSSLVGIKGEFPSSISLSDFVLSNASKDNSVNNDD 35
GS +G SS G G+ + +S SD+ S + D N+DD
Sbjct: 160 GSGSGGSSDDGGSGDNNNGVSSSDYGGSGDNDDGVCNDDD 199
>SB_49822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 750
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -1
Query: 241 AGAGDTLCVSEGWGRARLTLSGRAPHMTAGSNTGSSSLVGIKGEFPSSI 95
AG G + V G + + +G G+ GSSS+VG G S +
Sbjct: 482 AGGGSSSVVGAGGASSSVVGAGGGSSSVVGAGGGSSSVVGAGGASTSDV 530
>SB_6010| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/56 (26%), Positives = 21/56 (37%)
Frame = +3
Query: 72 DNTKSDNDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQPSETHNVSPAP 239
D K + D P I PV +P + PD+ A P +T + P P
Sbjct: 1691 DGKKLKEIVRDIEDPIISQPPRAPVCKPGAAVKSKPDAPIYAHPNVGQTLTLPPIP 1746
>SB_3843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 202 PNLRKRIMYRRHRLYNVYSRHRRRD 276
PNLR+R + RR +Y +RRR+
Sbjct: 13 PNLRRRAINRRREMYRRREMYRRRE 37
>SB_55897| Best HMM Match : RVT_1 (HMM E-Value=5.3e-37)
Length = 732
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 90 NDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQ-PSETHNVSPAPALQRLLTAS 266
+D D +P+ DEL V + ++WGA R Q E H+ P + L S
Sbjct: 490 DDTDPALTPYRKRRDELSVQDGCILWGARVMIPPDGRDQVKRELHSAHPGINRMKALARS 549
Query: 267 TTGPPPQD 290
P D
Sbjct: 550 YVWWPGMD 557
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 72 DNTKSDNDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQPSETHNVSPAPA-LQ 248
+N ++N+ ++ +S ++ + L P + P S+S P P+ +N+S L
Sbjct: 39 NNNNNNNNNNNSSSSSSSSNKKTTPLCPPITLTQTPTSISNVTPTPTNINNISSTTTPLD 98
Query: 249 RLLTASTTGPPP 284
T +TT P
Sbjct: 99 SSATTTTTPTLP 110
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 90 NDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQ-PSETHNVSPAPALQRLLTAS 266
+D D +P+ DEL V + ++WGA R Q E H+ P + L S
Sbjct: 1413 DDTDPALTPYRKRRDELSVQDGCILWGARVIIPPDGRDQVKRELHSAHPGINRMKALARS 1472
Query: 267 TTGPPPQD 290
P D
Sbjct: 1473 YVWWPGMD 1480
>SB_27207| Best HMM Match : eIF-5a (HMM E-Value=3.1e-15)
Length = 710
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 90 NDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQ-PSETHNVSPAPALQRLLTAS 266
+D D +P+ DEL V + ++WGA R Q E H+ P + L S
Sbjct: 195 DDTDPALTPYRKRRDELSVQDGCILWGARVIIPPDGRDQVKRELHSAHPGINRMKALARS 254
Query: 267 TTGPPPQD 290
P D
Sbjct: 255 YVWWPGMD 262
>SB_25588| Best HMM Match : PAE (HMM E-Value=1.5e-31)
Length = 996
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 142 QYWSQLSCGALCQTALV 192
+YWSQ SCG +C +V
Sbjct: 859 KYWSQRSCGCVCSAHVV 875
>SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028)
Length = 3809
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Frame = -1
Query: 187 TLSGRAPH--MTAGSNTGSSSLVGIKGEFPSSISLSDFVLSNASKDNSVNNDDC 32
T G APH SN V +KG P S +L D S N +DC
Sbjct: 3007 TRVGLAPHDARKLSSNEEHDKGVSLKGRMPVSRHGEPGILPKEEADASCNGEDC 3060
>SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 1280
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 90 NDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQ-PSETHNVSPAPALQRLLTAS 266
+D D +P+ DEL V + ++WGA R Q E H+ P + L S
Sbjct: 724 DDTDPALTPYRKRRDELSVQDGCILWGARVIIPPDGRDQVKRELHSAHPGINRMKALARS 783
Query: 267 TTGPPPQD 290
P D
Sbjct: 784 YVWWPGMD 791
>SB_54959| Best HMM Match : TatC (HMM E-Value=0.44)
Length = 359
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 259 VSRRC-KAGAGDTLCVSEGWGRARLTLSGRAPHMTAGSNTGSSSLVGIKGE 110
+ + C + GAGD S+G G +TLSG P + +VGIK +
Sbjct: 121 IDQACTQGGAGDLPVQSDGTGLVTVTLSGPFPADDEEITSPDFIVVGIKNK 171
>SB_51753| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 378
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 90 NDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQ-PSETHNVSPAPALQRLLTAS 266
+D D +P+ DEL V + ++WGA R Q E H+ P + L S
Sbjct: 90 DDTDPALTPYRKRRDELSVQDGCILWGARVIIPPDGRDQVKRELHSAHPGINRMKALARS 149
Query: 267 TTGPPPQD 290
P D
Sbjct: 150 YVWWPGMD 157
>SB_46176| Best HMM Match : rve (HMM E-Value=8.7e-30)
Length = 378
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 90 NDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQ-PSETHNVSPAPALQRLLTAS 266
+D D +P+ DEL V + ++WGA R Q E H+ P + L S
Sbjct: 90 DDTDPALTPYRKRRDELSVQDGCILWGARVIIPPDGRDQVKRELHSAHPGINRMKALARS 149
Query: 267 TTGPPPQD 290
P D
Sbjct: 150 YVWWPGMD 157
>SB_27807| Best HMM Match : C2 (HMM E-Value=0)
Length = 405
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 350 RAIXGLKTVMKRRTREPLW 406
R + KT +KRRTR+P+W
Sbjct: 305 RRLDKKKTTIKRRTRDPVW 323
>SB_27401| Best HMM Match : SCP (HMM E-Value=9e-23)
Length = 1105
Score = 27.5 bits (58), Expect = 6.0
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +2
Query: 167 GRSARQR*SCTTPTFGNA*CIAGTGFTTS---THGIDDGTTPTGSRKEHILKSTRLY*PE 337
G S R + + TTPT + TG TTS T TTPT + ++ +T L PE
Sbjct: 431 GHSTRSKPTPTTPTIADNTAYLTTGPTTSGDKTTSAIKPTTPTTTEASNL--TTELMTPE 488
Query: 338 RVSTRAI 358
+T I
Sbjct: 489 VTTTPTI 495
>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
Length = 1544
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 90 NDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQ-PSETHNVSPAPALQRLLTAS 266
+D D +P+ DEL V + ++WGA R Q E H+ P + L S
Sbjct: 889 DDTDPALTPYRKRRDELSVQDGCILWGARVMIPPDGRDQVKRELHSAHPGINRMKALARS 948
Query: 267 TTGPPPQD 290
P D
Sbjct: 949 YVWWPGMD 956
>SB_12900| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 883
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 90 NDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQ-PSETHNVSPAPALQRLLTAS 266
+D D +P+ DEL V + ++WGA R Q E H+ P + L S
Sbjct: 722 DDTDPALTPYRKRRDELSVQDGCILWGARVIIPPDGRDQVKRELHSAHPGINRMKALARS 781
Query: 267 TTGPPPQD 290
P D
Sbjct: 782 YVWWPGMD 789
>SB_9603| Best HMM Match : Extensin_2 (HMM E-Value=0.0058)
Length = 339
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 150 EPAVMWGALPDSVSLARPQPSETHNVSPAPALQRLLTASTTGPPPQDLVKNIYSNQRV 323
+P VM+ V + QPS ++S + ++ LLT S PPP + V + S V
Sbjct: 119 QPPVMFAISQPPVMSSTSQPSHVRHLSTSSHVRHLLTQSC--PPPLNPVMSATSQPPV 174
>SB_7302| Best HMM Match : DUF910 (HMM E-Value=2.2)
Length = 288
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 57 SLDAFDNTKSDNDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQPSETHNVSP 233
SLD F + D+ DD P + E+ EPA+ LP++ + A P+P +P
Sbjct: 164 SLDDFIVSDEDSS-DDDERPVLDCDREVFEDEPALNKDNLPETWTFATPKPVNKPPATP 221
>SB_52001| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 75 NTKSDNDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLA--RPQPSET 218
N D+D DD + P++ S + P LP S LA RPQ + T
Sbjct: 44 NNNDDDDDDDDDEPYVLPSFLGLISSPTSSLSVLPSSTFLAIQRPQGNLT 93
>SB_38379| Best HMM Match : GspM (HMM E-Value=1.4)
Length = 697
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +3
Query: 171 ALPDSVSLA-RPQPSETHNV----SPAPALQRLLTASTTGPPPQDL 293
A P++++LA P+PS+ V SP P + + T ST+ PP L
Sbjct: 542 AAPENLALAVNPRPSQKQLVLVLPSPIPPPEGIATTSTSEDPPPRL 587
>SB_19076| Best HMM Match : HECT (HMM E-Value=0)
Length = 2018
Score = 27.1 bits (57), Expect = 7.9
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +1
Query: 214 KRIMYRRHRLYNVYSRHRRRDHPHRIS*RTYTQINASILTRTRLHARDXRSQNSDEAKNQ 393
K + R R + Y RH+RRDH R S RT + +A + + D + D
Sbjct: 1591 KGTVQRLRRALSSY-RHKRRDHRDRESRRTLS-ADARPFYCSGTPSTDGDDTDGDPLPYH 1648
Query: 394 RTFVAKRAKT*VH--RPALAA 450
R + +R VH +PALA+
Sbjct: 1649 RQSLGERLYPRVHALKPALAS 1669
>SB_1476| Best HMM Match : RVT_1 (HMM E-Value=5.49309e-43)
Length = 1078
Score = 27.1 bits (57), Expect = 7.9
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 39 SLLTELSLDAFDNTKSDNDIDDGNSPFIPTSDELPVLEPAVMWGALPDSVSLARPQPSET 218
S T ++ FD S +D + IP + LP+ +PA D++ L P P +
Sbjct: 123 SATTSSTVSTFDLPAS---AEDTPTETIPPLETLPIDQPAPAGDMSTDNLHLQEPHPVD- 178
Query: 219 HNVSPAPALQRLL-TASTTGPPPQD 290
PAP L+ T ++ G P D
Sbjct: 179 ---PPAPLGDALINTITSQGSHPID 200
>SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 211 RKRIMYRRHRLYNVYSR-HRRRDHPHRIS*RTYTQINASILTRTRLHARD 357
R R+ RR RL+ R H RR HR R +T+ R RLH D
Sbjct: 168 RPRLHRRRTRLHTRRPRLHTRRPRLHRRRPRLHTRRPRRHRRRPRLHRHD 217
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 27.1 bits (57), Expect = 7.9
Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Frame = +3
Query: 3 EPQENDSSCEQSSLLTELSLDAFDNTKSDNDIDDG--NSPFIPTSDELPVLEPAVMWGAL 176
+ NDS S S A +NTK + + G N P + A M +
Sbjct: 443 DDSSNDSDSGSESEDESSSESAEENTKISSSVKKGLQNGDIDSKPRPSPAVREAEMGRSR 502
Query: 177 PDSVSLARPQPSETHNVSPAPALQRLLTASTTGP 278
D+ + P P +T VSP A++ T + P
Sbjct: 503 RDNST--SPLPRQTRRVSPTQAVRPSSTQGQSAP 534
>SB_13893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 202 PNLRKRIMYRRHRLYNVYSRHRRRD 276
PNLR+R + RR +Y +RRR+
Sbjct: 18 PNLRRRAINRRREMYRRREIYRRRE 42
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 211 RKRIMYRRHRLYNVYSRHRRRD 276
R+R MYRR +Y + +RRR+
Sbjct: 45 RRREMYRRREMYRLREMYRRRE 66
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,721,309
Number of Sequences: 59808
Number of extensions: 321884
Number of successful extensions: 1307
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 994359969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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