Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_N04
         (535 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537840-1|CAD97851.1| 2150|Homo sapiens hypothetical protein pr...    30   4.5  
BC040523-1|AAH40523.1| 1551|Homo sapiens CCR4-NOT transcription ...    30   4.5  
BC024317-1|AAH24317.1| 1620|Homo sapiens CNOT1 protein protein.        30   4.5  
AB023224-1|BAA76851.2| 1835|Homo sapiens KIAA1007 protein protein.     30   4.5  
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.     30   5.9  

>BX537840-1|CAD97851.1| 2150|Homo sapiens hypothetical protein
            protein.
          Length = 2150

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +2

Query: 305  ALDFYQTALRDPAFYQLYXRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 484
            AL +   ALR P   ++Y   +  ++ FK+ LK YPQ   H   +         L  + +
Sbjct: 929  ALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 988

Query: 485  YXQ 493
            Y Q
Sbjct: 989  YGQ 991


>BC040523-1|AAH40523.1| 1551|Homo sapiens CCR4-NOT transcription
            complex, subunit 1 protein.
          Length = 1551

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +2

Query: 305  ALDFYQTALRDPAFYQLYXRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 484
            AL +   ALR P   ++Y   +  ++ FK+ LK YPQ   H   +         L  + +
Sbjct: 934  ALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 993

Query: 485  YXQ 493
            Y Q
Sbjct: 994  YGQ 996


>BC024317-1|AAH24317.1| 1620|Homo sapiens CNOT1 protein protein.
          Length = 1620

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +2

Query: 305 ALDFYQTALRDPAFYQLYXRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 484
           AL +   ALR P   ++Y   +  ++ FK+ LK YPQ   H   +         L  + +
Sbjct: 178 ALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 237

Query: 485 YXQ 493
           Y Q
Sbjct: 238 YGQ 240


>AB023224-1|BAA76851.2| 1835|Homo sapiens KIAA1007 protein protein.
          Length = 1835

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +2

Query: 305 ALDFYQTALRDPAFYQLYXRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 484
           AL +   ALR P   ++Y   +  ++ FK+ LK YPQ   H   +         L  + +
Sbjct: 393 ALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIE 452

Query: 485 YXQ 493
           Y Q
Sbjct: 453 YGQ 455


>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
          Length = 1217

 Score = 29.9 bits (64), Expect = 5.9
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +2

Query: 215 DYSTNLMKLSLAMCSVQHPKPFDKHTFMPSALDFYQTALRDPAFYQ 352
           D S    K+   +  V+  +P  K  FM S LDF ++  R P  YQ
Sbjct: 436 DSSLTREKIEAKIKEVEEKQPEMKSGFMASFLDFLKSGKRHPPLYQ 481


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,808,452
Number of Sequences: 237096
Number of extensions: 1419715
Number of successful extensions: 2677
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2677
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)