Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_N04
         (535 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006665-2|AAF39904.1|  341|Caenorhabditis elegans Hypothetical ...    33   0.17 
U23448-6|AAL27225.1|  915|Caenorhabditis elegans Dnaj domain (pr...    28   3.7  
AC024817-53|AAP13744.1|  549|Caenorhabditis elegans Hypothetical...    28   3.7  
AC024817-52|AAF59568.4|  611|Caenorhabditis elegans Hypothetical...    28   3.7  
Z81476-4|CAB03923.1|  707|Caenorhabditis elegans Hypothetical pr...    28   4.8  
U23448-5|AAL27227.1|  912|Caenorhabditis elegans Dnaj domain (pr...    28   4.8  
U53339-3|AAA96199.1|  278|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>AC006665-2|AAF39904.1|  341|Caenorhabditis elegans Hypothetical
           protein H27M09.5 protein.
          Length = 341

 Score = 32.7 bits (71), Expect = 0.17
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = +3

Query: 9   SRPDTTSTQRKNYKHTFWTF*KDFVSPYRKANSNRMARKLISTMNRPLTLSETIGKRT 182
           S P T+ ++ K  K     +  D +SP  K ++    +KLIST+  P TLS+   K T
Sbjct: 244 SLPPTSPSKEKPTKKISRNYLADPLSPGDKKSAKISTKKLISTIKPPKTLSKKSAKST 301


>U23448-6|AAL27225.1|  915|Caenorhabditis elegans Dnaj domain
            (prokaryotic heat shockprotein) protein 5, isoform a
            protein.
          Length = 915

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +2

Query: 119  KKIDFHDEQAINFVGNYWQENADXV*REKLQQDYSTNLMKLSLAMCSVQHPKP 277
            K  DF D Q+  +  +Y   + D      LQ++YST L + SLA  S ++ +P
Sbjct: 846  KNSDF-DAQSQYYNSSYPSSSTDARFLSDLQEEYSTLLRQRSLAQISFKNCEP 897


>AC024817-53|AAP13744.1|  549|Caenorhabditis elegans Hypothetical
           protein Y54G2A.26b protein.
          Length = 549

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -3

Query: 122 SCHTIRICLSVGTDE-VFSKCPERMLVVLT 36
           S  T+R C+ +  DE VF++C ++ LV LT
Sbjct: 227 SLATVRKCIDMAVDEEVFTRCTDKNLVNLT 256


>AC024817-52|AAF59568.4|  611|Caenorhabditis elegans Hypothetical
           protein Y54G2A.26a protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -3

Query: 122 SCHTIRICLSVGTDE-VFSKCPERMLVVLT 36
           S  T+R C+ +  DE VF++C ++ LV LT
Sbjct: 289 SLATVRKCIDMAVDEEVFTRCTDKNLVNLT 318


>Z81476-4|CAB03923.1|  707|Caenorhabditis elegans Hypothetical
           protein C25F9.5 protein.
          Length = 707

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +2

Query: 44  LQAYVLDILKRLRQSLQKGKFESYGKKIDFHDEQAINFVGNYW 172
           L+ Y+L+ +K + + + K   E   K+++  D Q +    NY+
Sbjct: 650 LRNYILESVKSMEECINKADIEKIWKQLEASDLQILKLSKNYF 692


>U23448-5|AAL27227.1|  912|Caenorhabditis elegans Dnaj domain
            (prokaryotic heat shockprotein) protein 5, isoform c
            protein.
          Length = 912

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 18/71 (25%), Positives = 32/71 (45%)
 Frame = +2

Query: 65   ILKRLRQSLQKGKFESYGKKIDFHDEQAINFVGNYWQENADXV*REKLQQDYSTNLMKLS 244
            +LK +R      ++          D Q+  +  +Y   + D      LQ++YST L + S
Sbjct: 824  MLKNMRAHTHNVQYRLLSPMNSDFDAQSQYYNSSYPSSSTDARFLSDLQEEYSTLLRQRS 883

Query: 245  LAMCSVQHPKP 277
            LA  S ++ +P
Sbjct: 884  LAQISFKNCEP 894


>U53339-3|AAA96199.1|  278|Caenorhabditis elegans Hypothetical
           protein F58A6.1 protein.
          Length = 278

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +2

Query: 140 EQAINFVGNYWQENA-DXV*REKLQQDYSTNLMKLSLAMCSVQHPKPFDK 286
           + A+N+  ++  EN+ + V    + Q ++ ++MK S+A  S Q   PF K
Sbjct: 228 KNALNYARDHTVENSLNYVATWNMSQLFTDDIMKASMASLSKQPTPPFSK 277


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,839,021
Number of Sequences: 27780
Number of extensions: 242053
Number of successful extensions: 674
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)