Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_N01
(545 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1599 - 28022196-28022218,28022355-28022408,28022545-280226... 104 4e-23
03_02_1006 + 13150394-13150450,13150787-13150899,13152538-131527... 100 7e-22
03_02_0185 - 6239421-6239480,6239971-6240024,6240523-6240578,624... 94 8e-20
08_02_1596 + 28125331-28125556,28125986-28126047,28126160-281261... 91 5e-19
04_04_0863 + 28847761-28848009,28848108-28848131,28849388-288494... 50 1e-06
03_06_0167 - 32115770-32115886,32116388-32117102,32117178-321173... 32 0.26
09_06_0081 + 20745627-20748144,20748211-20748308 30 1.0
07_01_0384 + 2861819-2862169 29 2.4
03_02_0335 - 7579319-7579580,7580384-7581074,7581183-7581240 29 2.4
10_08_1058 + 22608852-22609172,22609257-22610651 29 3.2
08_02_1227 - 25398063-25398302,25398629-25398790,25399019-253991... 29 3.2
04_04_0588 - 26412487-26413887 29 3.2
10_02_0121 - 5513491-5513630,5514765-5514850,5515206-5515333 28 4.2
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 28 4.2
09_02_0206 - 5783868-5783986,5784422-5784485,5784552-5784620,578... 28 5.6
01_01_1234 - 10007446-10007940,10008030-10008125,10008980-100092... 28 5.6
11_01_0763 + 6402901-6403971,6404581-6404826 27 7.4
10_06_0119 - 10956190-10956754,10956984-10957139,10958402-10958622 27 7.4
07_01_0297 - 2156960-2157736 27 7.4
05_01_0214 - 1615519-1616775 27 7.4
12_02_0445 - 19153580-19154269 27 9.8
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 27 9.8
08_02_1251 - 25592537-25593380,25593589-25593893 27 9.8
02_02_0065 + 6490490-6491552,6491754-6493601,6493857-6494236 27 9.8
>07_03_1599 -
28022196-28022218,28022355-28022408,28022545-28022620,
28022727-28022758,28022921-28023016,28023105-28023206,
28023291-28023366
Length = 152
Score = 104 bits (250), Expect = 4e-23
Identities = 48/101 (47%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Frame = +1
Query: 73 RAIAHLVG-ENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSH 249
+A+A L E ++G I F++ DG V GS+ GL PG +GFHVH GD + GC STG H
Sbjct: 3 KAVAVLASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPH 62
Query: 250 FNPENKEHGHPSDENRHVGDLGNAEFDQNYSSKIDMIDPHL 372
FNP KEHG P DENRH GDLGN + + +++ D +
Sbjct: 63 FNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQI 103
Score = 67.7 bits (158), Expect = 6e-12
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = +2
Query: 380 TGAHGILGRAVVLHERADDFGRTDHPDSRKTGNAGGRVACGVIGI 514
TGAH I+GRAVV+H DD G+ H S+ TGNAGGRVACG+IG+
Sbjct: 106 TGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
>03_02_1006 +
13150394-13150450,13150787-13150899,13152538-13152709,
13153791-13153878,13153971-13154072,13154197-13154292,
13154547-13154578,13154727-13154802,13155264-13155317,
13155431-13155453
Length = 270
Score = 100 bits (240), Expect = 7e-22
Identities = 43/92 (46%), Positives = 57/92 (61%)
Frame = +1
Query: 97 ENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPENKEHG 276
E ++G I F + DG V GS+ GL PG +GFH+H GD + GC STG H+NP KEHG
Sbjct: 130 EIVKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMSTGPHYNPAGKEHG 189
Query: 277 HPSDENRHVGDLGNAEFDQNYSSKIDMIDPHL 372
P DE RH GDLGN ++ + I ++D +
Sbjct: 190 APEDETRHAGDLGNVTAGEDGVANIHVVDSQI 221
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +2
Query: 380 TGAHGILGRAVVLHERADDFGRTDHPDSRKTGNAGGRVACGVIGI 514
TG + I+GRAVV+H DD G+ H S+ TGNAGGRVACG+IG+
Sbjct: 224 TGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 268
>03_02_0185 -
6239421-6239480,6239971-6240024,6240523-6240578,
6241108-6241183,6241276-6241307,6241421-6241516,
6242498-6242599,6242728-6242833
Length = 193
Score = 93.9 bits (223), Expect = 8e-20
Identities = 40/73 (54%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +1
Query: 103 IRGNITFTRLPD-GKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFNPENKEHGH 279
+ G + F + P G V G + GL PG +GFH+H GD + GC STG HFNP NK HG
Sbjct: 23 VAGALHFFQDPSTGYTEVRGRVTGLAPGLHGFHIHSFGDTTNGCNSTGPHFNPHNKSHGA 82
Query: 280 PSDENRHVGDLGN 318
PSD+ RHVGDLGN
Sbjct: 83 PSDDERHVGDLGN 95
Score = 34.7 bits (76), Expect = 0.049
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 374 AFTGAHGILGRAVVLHERADDFGR 445
+ +G H ILGRAVV+H +DD GR
Sbjct: 114 SLSGPHSILGRAVVVHADSDDLGR 137
>08_02_1596 +
28125331-28125556,28125986-28126047,28126160-28126199,
28126934-28127029,28127138-28127169,28127274-28127349,
28127430-28127483,28127916-28127941
Length = 203
Score = 91.1 bits (216), Expect = 5e-19
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Frame = +1
Query: 73 RAIAHLVGEN-IRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSH 249
+A+A L G + + G +T T+ G V + GL PG +GFH+HE GD + GC STG H
Sbjct: 53 KAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPH 112
Query: 250 FNPENKEHGHPSDENRHVGDLGNAEFDQNYSSKIDMIDPHL 372
FNP N HG P DE RH GDLGN + ++ ++D +
Sbjct: 113 FNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQI 153
Score = 58.4 bits (135), Expect = 3e-09
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +2
Query: 380 TGAHGILGRAVVLHERADDFGRTDHPDSRKTGNAGGRVACGVIGI 514
+G + ++GRA V+HE DD G+ H S TGNAGGR+ACGV+G+
Sbjct: 156 SGPNSVVGRAFVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGL 200
>04_04_0863 +
28847761-28848009,28848108-28848131,28849388-28849460,
28849550-28849684,28850191-28850411,28851747-28851983
Length = 312
Score = 50.0 bits (114), Expect = 1e-06
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Frame = +1
Query: 76 AIAHLVGENIRGNITFTRLPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTGSHFN 255
A+A G I G + ++ VE + GL PG +G+ ++E GD++ G STG +N
Sbjct: 167 AVAEFKGPVIFGVVRLAQVNMELAIVEATFSGLSPGKHGWSINEFGDLTRGAESTGKVYN 226
Query: 256 PENKEHGHPSDE--NRHVGDLGNAEFDQNYS--SKIDMIDPHLGIYRSTRDSRQG 408
P + P + G+ G A+F + +D+I + +Y + S G
Sbjct: 227 PSDYRSNKPLGDLGTLEAGEKGEAQFSASKEKLKVVDLIGRSIALYATEDRSDPG 281
>03_06_0167 -
32115770-32115886,32116388-32117102,32117178-32117383,
32118094-32118138,32119047-32119109,32119726-32119749,
32120673-32120772,32120814-32120907,32121036-32121074,
32121605-32121668
Length = 488
Score = 32.3 bits (70), Expect = 0.26
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 130 LPDGKVHVEGSIVGLPPGHYGFHVHEKGDISGGCGSTG 243
L + V+ ++ GL P +GFHVH G + GC G
Sbjct: 32 LASSLITVKENVSGLKPVLHGFHVHALGGTTNGCMRNG 69
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = -3
Query: 531 REMFYSIPMTPQATRPPALPVFLESGWSVRPK------SSARSCRTTALPRIPCAPVNAE 370
R + S+P P+A+ PA PV GW+V P S + + ++A PR AP+
Sbjct: 582 RALRVSVPH-PRASSAPAPPVAAPRGWTVSPTTARYSFSDSGASSSSAAPRASTAPLALH 640
Query: 369 MRVDHI 352
H+
Sbjct: 641 APAPHL 646
>07_01_0384 + 2861819-2862169
Length = 116
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 475 QRWWTRRLRCHRNTVKHL 528
QRWW RR RC N V L
Sbjct: 42 QRWWQRRWRCGSNVVASL 59
>03_02_0335 - 7579319-7579580,7580384-7581074,7581183-7581240
Length = 336
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = -1
Query: 185 WPG-----GSPTIDPSTWTLPSGSRVNVILPLMFSPTRWAIARVGC 63
WPG GS +DP+ + LP G+ V P +S W AR GC
Sbjct: 37 WPGILSNAGSARMDPTGFELPPGAARAVPAPTGWSGRLW--ARTGC 80
>10_08_1058 + 22608852-22609172,22609257-22610651
Length = 571
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 402 AGLWFYTSGLMIS--AALTTQIREKPATLVDASPAVSSEYCKTSLYLFI 542
A L FY +GL++ +A +R P T V SPA +++ L L++
Sbjct: 100 ASLLFYLAGLVLLTVSAAVPSLRPAPCTGVPCSPATGTQFSVFFLALYL 148
>08_02_1227 -
25398063-25398302,25398629-25398790,25399019-25399150,
25399909-25399961,25400465-25400942
Length = 354
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 510 PMTPQATRPPALPVFLESGWSVRPKSSARSCRTTALPRI 394
P +P +PPA FL SGW K R +T PRI
Sbjct: 120 PFSPTQPKPPAS--FLSSGWPDGVKKRGRPKGSTNKPRI 156
>04_04_0588 - 26412487-26413887
Length = 466
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = -1
Query: 329 SNSALPRSPTWRFSSLGWPCSLFSGLK*EPVEPQPPDMSPFSWTWNP*WPGGSPTIDPST 150
++S+ P SP S+ P + S P P + PF++ + GGSP + P +
Sbjct: 68 TSSSAPPSPR-SSSASDAPVRVISSSPSSPSPPSARHIFPFAYEASTTTVGGSPRLHPLS 126
Query: 149 WTLPSGSR 126
W S S+
Sbjct: 127 WQQSSMSQ 134
>10_02_0121 - 5513491-5513630,5514765-5514850,5515206-5515333
Length = 117
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 211 GDISGGCGSTGSHFNPENKEHGHPSDEN 294
G I+G G TG H P+ + HP E+
Sbjct: 64 GPITGNSGGTGQHAAPKYRSTTHPDKED 91
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = -1
Query: 314 PRSPTWRFSSLGWPCSLFSGLK*EPVEPQPPDMSPFSWTWNP*WPGGSPTIDPS 153
P S W ++G+P P P PP +P P G PT+DPS
Sbjct: 259 PESNAWTVPTIGFP----------PPPPPPPSPAPIQHFARPLHVWGHPTMDPS 302
>09_02_0206 -
5783868-5783986,5784422-5784485,5784552-5784620,
5784698-5784940,5786844-5786912,5786988-5787212,
5787289-5787532,5787607-5787716,5787948-5788016,
5788988-5789042,5789063-5789097,5789422-5789514,
5789545-5789595
Length = 481
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 507 MTPQATRPPALPVFLESGWS-VRPKSSARSCRTTALPRIPCAPVNAE 370
+ P+A PP V L G + P RS TTA R P A VN+E
Sbjct: 6 LIPRALLPPPPRVQLWPGHARASPAGGRRSRWTTAAARHPTAAVNSE 52
>01_01_1234 -
10007446-10007940,10008030-10008125,10008980-10009253,
10009381-10009682,10010078-10010123,10010319-10010368,
10011124-10011268,10012051-10012229,10012327-10012485,
10012636-10012887,10012972-10013097,10013197-10013525,
10014183-10014252
Length = 840
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 14 FYSPQLLSL*AAIMNARSRHGLSPIWS 94
F++P +++ AA+ AR GLSP+WS
Sbjct: 332 FFAPSVIAA-AAVYAARCTLGLSPLWS 357
>11_01_0763 + 6402901-6403971,6404581-6404826
Length = 438
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 454 PRFEKNRQRWWTRRLRC 504
P + + R RWW RR RC
Sbjct: 263 PAWRERRGRWWRRRPRC 279
>10_06_0119 - 10956190-10956754,10956984-10957139,10958402-10958622
Length = 313
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 454 PRFEKNRQRWWTRRLRC 504
P + + R RWW RR RC
Sbjct: 252 PAWRERRGRWWRRRPRC 268
>07_01_0297 - 2156960-2157736
Length = 258
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 100 NIRGNITFTRLPDGKVH 150
N+ G IT+ LPDG+VH
Sbjct: 80 NLDGRITYQSLPDGEVH 96
>05_01_0214 - 1615519-1616775
Length = 418
Score = 27.5 bits (58), Expect = 7.4
Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 7/125 (5%)
Frame = +1
Query: 76 AIAHLVGEN--IRGNITFTRLPDGKVH--VEGSIVGLPPGHYGFHVHEKG---DISGGCG 234
AI L+ E+ ++G++ F G + ++G GH H H G D G G
Sbjct: 146 AIVRLINESGEVQGSLMFAVSAFGLFVNIIMAVLLGHDHGHGHGHGHGHGHSHDHDHG-G 204
Query: 235 STGSHFNPENKEHGHPSDENRHVGDLGNAEFDQNYSSKIDMIDPHLGIYRSTRDSRQGCG 414
S H + E++EHGH + H GN+ N H S GC
Sbjct: 205 SDHDHHHHEDQEHGH---VHHHEDGHGNS-ITVNLHHHPGTGHHHHDAEEPLLKSDAGCD 260
Query: 415 STRAG 429
ST++G
Sbjct: 261 STQSG 265
>12_02_0445 - 19153580-19154269
Length = 229
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = +2
Query: 383 GAHGILGR---AVVLHERADDFGRTDHPDSRKTGNAGG-RVACGVIGI 514
G +GILG AV +H RAD GNAGG CG + +
Sbjct: 151 GRNGILGEEIEAVGVHLRADSVHSDASTTDLMAGNAGGVSCQCGCLSV 198
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +1
Query: 190 GFHVHEKGDISGGCGSTGSHFNPENKEHGHPSDENRHVGDLGNAEFD 330
GF +GD SGG G G F + P D R + D G +D
Sbjct: 1159 GFGGRGRGDFSGGRGGRGRGFGGRGRSDRGPHD--RFISD-GRGRYD 1202
>08_02_1251 - 25592537-25593380,25593589-25593893
Length = 382
Score = 27.1 bits (57), Expect = 9.8
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -3
Query: 456 GWSVRPKSSARSCRTTALPRIPCAPVNAEMRVDHIN 349
GW VR SSAR CR A A RVDH+N
Sbjct: 188 GWGVRMASSAR-CRRRARGLGDGAAAIHMCRVDHLN 222
>02_02_0065 + 6490490-6491552,6491754-6493601,6493857-6494236
Length = 1096
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 29 LLSL*AAIMNARSRHGLSPIWSGRTSEAILRSLG 130
L SL A I+ + HG P W G S + SLG
Sbjct: 292 LSSLTALILQENNLHGGIPSWLGNLSSLVYLSLG 325
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,426,591
Number of Sequences: 37544
Number of extensions: 389522
Number of successful extensions: 1319
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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