Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_N01
         (545 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.50 
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   4.7  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   8.2  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 25.0 bits (52), Expect = 0.50
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +1

Query: 259 ENKEHGHPSDENRHVG--DLGNAEFDQNYSSKIDMIDPH 369
           +N ++ H +DENRH    D+ +       S  ID  + H
Sbjct: 229 DNSDYSHTTDENRHSSTLDIDHKMLTPIKSEPIDAYEMH 267


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 77  LSPIWSGRTSEAILR 121
           L P+W G  SEA+ R
Sbjct: 224 LPPVWVGGESEALAR 238


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 122 NVILPLMFSPTRWAIARVGCERS*W 48
           +V   ++  P R AIA   CE S W
Sbjct: 394 DVXFRILTMPVRDAIAGTICENSAW 418


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,729
Number of Sequences: 438
Number of extensions: 3522
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)