Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_M22
(446 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC622.12c |||NADP-specific glutamate dehydrogenase |Schizosacc... 27 1.7
SPBC1271.01c |pof13||F-box protein Pof13|Schizosaccharomyces pom... 27 1.7
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 26 3.0
SPBC16D10.07c |sir2||Sir2 family histone deacetylase Sir2|Schizo... 25 4.0
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 25 5.3
SPAC1002.17c |urg2||uracil phosphoribosyltransferase |Schizosacc... 25 5.3
SPBC1773.11c |mug89||CDC50 domain protein|Schizosaccharomyces po... 25 5.3
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 25 5.3
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 7.0
SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo... 25 7.0
SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc... 25 7.0
SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces ... 24 9.3
SPBC3D6.05 |ptp4||phosphatidate cytidylyltransferase Ptp4 |Schiz... 24 9.3
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 9.3
>SPCC622.12c |||NADP-specific glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 451
Score = 26.6 bits (56), Expect = 1.7
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 147 DPAFYQLYNRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 296
+P F Q Y IVG I + K + + +P+ K + I + V+E VT+ D
Sbjct: 6 EPEFQQAYKEIVGSIESSKLF-EVHPELKRVLPIISIPERVLEFRVTWED 54
>SPBC1271.01c |pof13||F-box protein Pof13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 396
Score = 26.6 bits (56), Expect = 1.7
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 221 IRLQVMLECVNVTH-NPVI*LIECRVSKCGLVKVKRTGHEGVLVEWF 84
I Q L+ + TH NPV EC +S+C L K G E L + F
Sbjct: 233 ILFQNALDALPTTHGNPV----ECDISRCPLNACKIAGQETELADLF 275
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 25.8 bits (54), Expect = 3.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 307 LMPLTVYS*PPKRLRLVTHTTSRFVNHDST 396
L P+T+ PP L L+ H VNH S+
Sbjct: 459 LFPMTLQVVPPPVLVLLRHLAENLVNHISS 488
>SPBC16D10.07c |sir2||Sir2 family histone deacetylase
Sir2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 25.4 bits (53), Expect = 4.0
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 45 YEIVARHVLGAAPKPFDKHTFMPSALDFYQTALRD 149
Y +ARH L + FD HTF + FY T RD
Sbjct: 183 YARLARHGLSEPSEMFDIHTFRENPEIFY-TFARD 216
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.0 bits (52), Expect = 5.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 154 HSISYITGLWVTLTHSSIT*SLILKRNFISSALKSMMLSLRN*SH 288
+S S I W T HSS+ +L R + S + ++ LRN H
Sbjct: 973 NSKSVIGENWTTCLHSSLVDNLGKYRKYDGSKILDILRVLRNKRH 1017
>SPAC1002.17c |urg2||uracil phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 189
Score = 25.0 bits (52), Expect = 5.3
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 283 SHSLTIANLMPLTVYS*PPKRLRLVTHTTSRFVNHDSTTSLSVLPSTFSPIL 438
SH + + L S P ++R V SRF+ ++ST +L + P+L
Sbjct: 8 SHPVVNEQIAILRDRSLKPSQVRSVVDEISRFLAYESTKTLKSPSVSIVPVL 59
>SPBC1773.11c |mug89||CDC50 domain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 396
Score = 25.0 bits (52), Expect = 5.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 276 KLVTFFDYSQFDATNSVFLTTQEI 347
K+ FF FD T S+ LTT+ +
Sbjct: 313 KIGLFFPVKSFDGTKSLVLTTRSV 336
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 25.0 bits (52), Expect = 5.3
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +1
Query: 79 HLNHSTSTPSCPVRLTF--TKPHFETLHSISYITGLWVTLT 195
HL S STPS LTF T + T H LW L+
Sbjct: 605 HLIDSISTPSVCTSLTFAPTGDYLATTHVDQVGISLWTNLS 645
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 24.6 bits (51), Expect = 7.0
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Frame = +1
Query: 61 AMCSVQHLNHSTSTPSCPVRLTFTKPHFETLHSISYITGLWVTLTHSSIT*SLILKRNFI 240
++ S Q + ++ S + LT K T + + V+L SS SLI+ I
Sbjct: 510 SLSSSQLSTENFTSASSSLSLTNAKSSLSTPSTTIPTSNSSVSLQTSS---SLIISSPII 566
Query: 241 SSALKSMMLSLRN*SHSLTIAN---LMPLTVYS*PPKRLRLVTHTTSRFVNHDSTTSLSV 411
SS+L + S +HS+T +N L S L+T S + S+TSL+
Sbjct: 567 SSSLTATSTSTPALTHSITPSNTSYTSSLIPSSSTDYSSSLIT-VCSNVTSEISSTSLAS 625
Query: 412 LPSTFS 429
L ST +
Sbjct: 626 LISTLT 631
>SPBC31F10.10c |||zf-MYND type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 24.6 bits (51), Expect = 7.0
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 66 VLGAAPKPFDKHTFMPSALDFYQTALRDPAFYQLYNR 176
V G P PF T S+ Y LRD QL N+
Sbjct: 180 VNGDVPSPFGASTASSSSRRVYSVDLRDSGDVQLPNQ 216
>SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 24.6 bits (51), Expect = 7.0
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +3
Query: 165 LYNRIVGYINAFKHYLKP----YPQEKLHFVGVKINDVVVEKL 281
+Y +++G +N F+ ++ Y + + VKI+ +VV+KL
Sbjct: 385 VYYKLIGILNRFRKSVQRQEENYVNTRSTILSVKIHHIVVQKL 427
>SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 441
Score = 24.2 bits (50), Expect = 9.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 413 NTERLVVESWLTNLEVVWVTSLNLL 339
+T R + E W+ EV ++TSL+ L
Sbjct: 234 HTSRHLAEFWMLEAEVAFMTSLSQL 258
>SPBC3D6.05 |ptp4||phosphatidate cytidylyltransferase Ptp4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 218
Score = 24.2 bits (50), Expect = 9.3
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3
Query: 150 PAFYQLYNRIVG 185
PAF +LYNR++G
Sbjct: 64 PAFSRLYNRVIG 75
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 24.2 bits (50), Expect = 9.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 339 QEIKTSYPHNFKVRQPRLNHKPFSVTIDVQS 431
Q I+ SYP+ F R P+ H P + +D +
Sbjct: 606 QHIQYSYPNTFVNRFPQNIHHPSANLLDASA 636
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,864,770
Number of Sequences: 5004
Number of extensions: 37315
Number of successful extensions: 108
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 164204010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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