Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_M22
(446 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29525| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.19
SB_43557| Best HMM Match : Pentapeptide (HMM E-Value=8.1e-11) 32 0.25
SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_43460| Best HMM Match : Keratin_B2 (HMM E-Value=0.68) 29 2.3
SB_7240| Best HMM Match : OMPdecase (HMM E-Value=0) 28 4.0
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 27 5.3
SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24) 27 5.3
SB_33902| Best HMM Match : Metallothionein (HMM E-Value=0.71) 27 9.3
SB_33334| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
>SB_29525| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 32.3 bits (70), Expect = 0.19
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 117 ALDFYQTALRDPAFYQLYNRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 296
AL + ALR P ++Y + ++ FK LK YP H + + L+ + D
Sbjct: 180 ALRYVLDALRKPYGSKMYMFGIAALDRFKTRLKDYPHYCQHLASIPHFKEFPQSLIEYID 239
Query: 297 YSQ 305
Y Q
Sbjct: 240 YGQ 242
>SB_43557| Best HMM Match : Pentapeptide (HMM E-Value=8.1e-11)
Length = 129
Score = 31.9 bits (69), Expect = 0.25
Identities = 25/97 (25%), Positives = 42/97 (43%)
Frame = +1
Query: 79 HLNHSTSTPSCPVRLTFTKPHFETLHSISYITGLWVTLTHSSIT*SLILKRNFISSALKS 258
+L HST T S L T T +++++T + TLTH +IT S I L
Sbjct: 26 NLTHSTLTHSNLTHLNLTHSTL-TYSTLTHLTLTYSTLTHLTITYSTITHSTLTHLTLTH 84
Query: 259 MMLSLRN*SHSLTIANLMPLTVYS*PPKRLRLVTHTT 369
+ L+ +HS + + + + +TH+T
Sbjct: 85 LTLTYSTLTHSTLTHSTLTHSTLTHSTLTHSTITHST 121
Score = 31.1 bits (67), Expect = 0.43
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +1
Query: 157 SISYITGLWVTLTHSSIT*SLILKRNFISSALKSMMLSLRN*SHS-LTIANLMPLTVYS* 333
++++ T + +TLTHS++T + N S L L+ N +HS LT + L LT+
Sbjct: 1 TLTHPTLIHLTLTHSNLTHLTLTHSNLTHSTLTHSNLTHLNLTHSTLTYSTLTHLTLTYS 60
Query: 334 PPKRLRLVTHT-TSRFVNHDSTTSLSVLPSTFS 429
L + T T + H + T L++ ST +
Sbjct: 61 TLTHLTITYSTITHSTLTHLTLTHLTLTYSTLT 93
Score = 29.1 bits (62), Expect = 1.8
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 46 MKLSLAMCSVQHLNHSTSTPSCPVRLTFTKP---HFETLH-SISYITGLWVTLTHSSIT* 213
+ L+ + + L H T T S LT T H H +++++T + TLTHS++T
Sbjct: 40 LNLTHSTLTYSTLTHLTLTYSTLTHLTITYSTITHSTLTHLTLTHLTLTYSTLTHSTLTH 99
Query: 214 SLILKRNFISSALKSMMLSLRN*SHS 291
S + S L ++ +HS
Sbjct: 100 STLTHSTLTHSTLTHSTITHSTLTHS 125
Score = 29.1 bits (62), Expect = 1.8
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +1
Query: 43 LMKLSLAMCSVQHLN--HSTSTPSCPVRLTFTKPHFETLHSISYITGLWVTLTHSSIT*S 216
L L+L ++ HL +ST T S LT T H +++Y T TLTHS++T S
Sbjct: 52 LTHLTLTYSTLTHLTITYSTITHSTLTHLTLT--HL----TLTYSTLTHSTLTHSTLTHS 105
Query: 217 LILKRNFISSALKSMMLSLRN*SH 288
+ S + L+ N +H
Sbjct: 106 TLTHSTLTHSTITHSTLTHSNLTH 129
>SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1548
Score = 31.1 bits (67), Expect = 0.43
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 58 LAMCSVQHLNHSTSTPSCPVRLTFTKPHFET 150
L+ CS+Q L +T T P+R++F++PH T
Sbjct: 1421 LSTCSLQSLTDNT-TSERPIRISFSEPHLHT 1450
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 29.1 bits (62), Expect = 1.8
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +1
Query: 226 KRNFISSALKSMMLSLRN*SHSLTIANLMPLT--VYS*PPKRLRLVTHTTSRFVNHDSTT 399
K F++ K +MLS+R+ +SLT+ +++P VY K ++ T T S V+ ++
Sbjct: 3076 KDEFLAMESKKLMLSVRDRKNSLTLYHVIPKDSGVYKCVLKN-KVGTATKSFTVDVEAKK 3134
Query: 400 SLSVLPSTF 426
S ++P F
Sbjct: 3135 SKGIIPEFF 3143
>SB_43460| Best HMM Match : Keratin_B2 (HMM E-Value=0.68)
Length = 306
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 69 LGAAPKPFDKHTFMPSALDFYQTALRDPAFYQLYNRIVGYINAF 200
+G + + F+P+ L F T+ D FY NR +G IN++
Sbjct: 1 MGVTLRRAKEKRFIPADLSFGITSFYDVYFYSPRNRSLGIINSY 44
>SB_7240| Best HMM Match : OMPdecase (HMM E-Value=0)
Length = 474
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 234 LHFVGVKINDVVVEKLVTFFDYSQFDATNSV 326
LH G K++D VVE + F + +QF AT+ V
Sbjct: 181 LHAQG-KVDDAVVESVREFLEANQFKATSDV 210
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 27.5 bits (58), Expect = 5.3
Identities = 24/85 (28%), Positives = 35/85 (41%)
Frame = +3
Query: 189 INAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFDYSQFDATNSVFLTTQEIKTSYPHN 368
+ F+ L PYP ++HF VV + + D TNS F ++ P +
Sbjct: 623 LTEFQTNLVPYP--RIHFPMASYAPVVSAEKAYHEQLTVADITNSCFEPANQMVKCDPRH 680
Query: 369 FKVRQPRLNHKPFSVTIDVQSDIAT 443
K L ++ V DV S IAT
Sbjct: 681 GKYMACCLLYRGDVVPKDVNSAIAT 705
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 377 SSTTTQPQAFQCYHRRSVR-YCH 442
SS+ + P +FQ YHR S YCH
Sbjct: 350 SSSLSPPSSFQSYHRPSRHLYCH 372
>SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24)
Length = 515
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 306 FDATNSVFLT-TQEIKTSYPHNFKVRQPRLNHKP 404
F A + VF+ T + T PH +++ +LNHKP
Sbjct: 281 FLAEDEVFIIFTHGVVTYTPHQVVIKKLKLNHKP 314
>SB_33902| Best HMM Match : Metallothionein (HMM E-Value=0.71)
Length = 361
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 110 HEGVLVEWFRCCTEHMASDNFIRSLIILC 24
H+GV++ T H +DNFI I+C
Sbjct: 93 HQGVVISRDDISTSHEEADNFIVQQAIMC 121
>SB_33334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -1
Query: 419 DGNTERLVVESWLTNLEVVWVTSLNLLGGQEYTVS 315
+G +R V+ESWL+ + + +LN+ G + VS
Sbjct: 443 NGGKQRAVLESWLSPVAKEELMNLNMKNGPQRLVS 477
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,945,370
Number of Sequences: 59808
Number of extensions: 272937
Number of successful extensions: 690
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 883875528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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