Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_M21
(433 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_48975| Best HMM Match : zf-CHY (HMM E-Value=8.5) 29 1.6
SB_11883| Best HMM Match : I-set (HMM E-Value=0) 29 2.2
SB_12093| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_34306| Best HMM Match : Pkinase (HMM E-Value=0) 27 6.6
SB_20743| Best HMM Match : Extensin_2 (HMM E-Value=0.33) 27 6.6
SB_20235| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_34339| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_20395| Best HMM Match : Extensin_2 (HMM E-Value=0.019) 27 8.7
>SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 29.1 bits (62), Expect = 1.6
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 251 GCDANRGCNYGC 286
GCD N GC YGC
Sbjct: 138 GCDGNYGCGYGC 149
Score = 29.1 bits (62), Expect = 1.6
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 251 GCDANRGCNYGC 286
GCD N GC YGC
Sbjct: 158 GCDGNYGCGYGC 169
Score = 29.1 bits (62), Expect = 1.6
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 251 GCDANRGCNYGC 286
GCD N GC YGC
Sbjct: 168 GCDGNYGCGYGC 179
Score = 29.1 bits (62), Expect = 1.6
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 251 GCDANRGCNYGC 286
GCD N GC YGC
Sbjct: 188 GCDGNYGCGYGC 199
Score = 29.1 bits (62), Expect = 1.6
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 251 GCDANRGCNYGC 286
GCD N GC YGC
Sbjct: 198 GCDGNYGCGYGC 209
Score = 29.1 bits (62), Expect = 1.6
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 251 GCDANRGCNYGC 286
GCD N GC YGC
Sbjct: 208 GCDGNYGCGYGC 219
>SB_48975| Best HMM Match : zf-CHY (HMM E-Value=8.5)
Length = 278
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 17 DCHSVQGYDCHTVHGYDCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHT 76
Query: 389 NDGHQC 406
G+ C
Sbjct: 77 VQGYDC 82
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 137 DCHTVQGYDCHTVHGYDCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHT 196
Query: 389 NDGHQC 406
G+ C
Sbjct: 197 VQGYDC 202
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 65 DCHTVQGYDCHTVQGYDCHTVHGYDCHTVQGYDCHTVHGYDCHTVQGYDCHTVQGYDCHT 124
Query: 389 NDGHQC 406
G+ C
Sbjct: 125 VQGYDC 130
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH + + + G+ +T GY + + Y +
Sbjct: 73 DCHTVQGYDCHTVHGYDCHTVQGYDCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHT 132
Query: 389 NDGHQC 406
G+ C
Sbjct: 133 VQGYDC 138
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 89 DCHTVQGYDCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHT 148
Query: 389 NDGHQC 406
G+ C
Sbjct: 149 VHGYDC 154
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH + + + G+ +T GY + + Y +
Sbjct: 129 DCHTVQGYDCHTVQGYDCHTVHGYDCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHT 188
Query: 389 NDGHQC 406
G+ C
Sbjct: 189 VQGYDC 194
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 41 DCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVHGYDCHTVQGYDCHT 100
Query: 389 NDGHQC 406
G+ C
Sbjct: 101 VHGYDC 106
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH ++ + + G+ +T GY + Y +
Sbjct: 49 DCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVHGYDCHTVQGYDCHTVHGYDCHT 108
Query: 389 NDGHQC 406
G+ C
Sbjct: 109 VQGYDC 114
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH + + + G+ +T GY + + Y +
Sbjct: 57 DCHTVQGYDCHTVQGYDCHTVQGYDCHTVHGYDCHTVQGYDCHTVHGYDCHTVQGYDCHT 116
Query: 389 NDGHQC 406
G+ C
Sbjct: 117 VQGYDC 122
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 81 DCHTVHGYDCHTVQGYDCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHT 140
Query: 389 NDGHQC 406
G+ C
Sbjct: 141 VQGYDC 146
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH ++ + + G+ +T GY + Y +
Sbjct: 105 DCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVHGYDCHTVHGYDCHT 164
Query: 389 NDGHQC 406
G+ C
Sbjct: 165 VQGYDC 170
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 113 DCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVHGYDCHTVHGYDCHTVQGYDCHT 172
Query: 389 NDGHQC 406
G+ C
Sbjct: 173 VQGYDC 178
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH + + + G+ +T GY + + Y +
Sbjct: 121 DCHTVQGYDCHTVQGYDCHTVQGYDCHTVHGYDCHTVHGYDCHTVQGYDCHTVQGYDCHT 180
Query: 389 NDGHQC 406
G+ C
Sbjct: 181 VQGYDC 186
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 145 DCHTVHGYDCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHT 204
Query: 389 NDGHQC 406
G+ C
Sbjct: 205 IQGYDC 210
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 153 DCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTIQGYDCHT 212
Query: 389 NDGHQC 406
G+ C
Sbjct: 213 VQGYDC 218
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH ++ + + G+ +T GY + + Y +
Sbjct: 25 DCHTVHGYDCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHT 84
Query: 389 NDGHQC 406
G+ C
Sbjct: 85 VHGYDC 90
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH ++ + + G+ +T GY + Y +
Sbjct: 33 DCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVHGYDCHT 92
Query: 389 NDGHQC 406
G+ C
Sbjct: 93 VQGYDC 98
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNH 388
D V D H G D + Y CH ++ + + G+ +T GY + Y +
Sbjct: 97 DCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVHGYDCHT 156
Query: 389 NDGHQC 406
G+ C
Sbjct: 157 VHGYDC 162
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/62 (24%), Positives = 25/62 (40%)
Frame = +2
Query: 221 VMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNHNDGH 400
V D H G D + Y CH + + + G+ +T GY + + Y + G+
Sbjct: 13 VQFYDCHSVQGYDCHTVHGYDCHTVHGYDCHTVQGYDCHTVQGYDCHTVQGYDCHTVQGY 72
Query: 401 QC 406
C
Sbjct: 73 DC 74
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +2
Query: 209 DTGPVMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTGY 352
D V D H G D + Y CH I+ + + G+ +T GY
Sbjct: 177 DCHTVQGYDCHTVQGYDCHTVQGYDCHTIQGYDCHTVQGYDCHTVQGY 224
>SB_11883| Best HMM Match : I-set (HMM E-Value=0)
Length = 616
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 292 FVTTIVASSVGIAAD*PMAINSHNWPSITTGLGSDILTLL 173
++T +V S I + N I TG+GSD++TLL
Sbjct: 501 YLTVLVGSPPSIRTTSENITETENIAYIVTGIGSDVITLL 540
>SB_12093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 9 DWRPLTSSALDDAGARRSFISSVQVSCLYWYIRIRGTCQTL 131
D PL SAL D R ++S + VSC Y +I C T+
Sbjct: 93 DTMPLELSALRDWSERLRYLSMLHVSC---YKQIYAACMTV 130
>SB_34306| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 367
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 112 RILMYQYKQLTCTDEMKERLAPASSSAELVRGRQSR 5
++L+ +LT D R+APA S +L RG+ +R
Sbjct: 255 KVLLASLDELTRDDPDSTRIAPALSLGKLGRGKAAR 290
>SB_20743| Best HMM Match : Extensin_2 (HMM E-Value=0.33)
Length = 375
Score = 27.1 bits (57), Expect = 6.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 25 RVPRWTTPGPDAP 63
++PRWT P PD P
Sbjct: 149 QIPRWTAPEPDTP 161
>SB_20235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 27.1 bits (57), Expect = 6.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 25 RVPRWTTPGPDAP 63
++PRWT P PD P
Sbjct: 2 QIPRWTAPEPDTP 14
>SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 36 LDDAGARRSFISSVQVSCLYWYI 104
LDD G R ++ +SCLYW +
Sbjct: 587 LDDHGLRGKAGLTIYISCLYWVV 609
>SB_34339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 615
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 221 VMAVDSHRSIGCDANRGCNYGCHKIRTNHRYRIVGFVDNTYTG 349
V+ ++S S CD C CH+ + R+V +++ YTG
Sbjct: 226 VILLNSSTSYLCDHQSRCPPNCHQRQKRVCSRLVKALEHVYTG 268
>SB_20395| Best HMM Match : Extensin_2 (HMM E-Value=0.019)
Length = 348
Score = 26.6 bits (56), Expect = 8.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 25 RVPRWTTPGPDAP 63
++PRWT P PD P
Sbjct: 110 QIPRWTAPKPDIP 122
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,058,355
Number of Sequences: 59808
Number of extensions: 260934
Number of successful extensions: 818
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 822495283
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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