Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_M20
         (181 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0TWK9 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   1.6  
UniRef50_UPI000023D8EF Cluster: hypothetical protein FG07362.1; ...    30   8.8  
UniRef50_Q06VN9 Cluster: DNA-directed RNA polymerase; n=1; Trich...    30   8.8  

>UniRef50_Q0TWK9 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 309

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 80  LCSCDHEITPNLLIKNRGFVFRGFSIPCV 166
           LC+C++E     + + RG VF GF +PC+
Sbjct: 61  LCACENEAFAVYVKRMRGLVFLGFLLPCI 89


>UniRef50_UPI000023D8EF Cluster: hypothetical protein FG07362.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG07362.1 - Gibberella zeae PH-1
          Length = 361

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 26  RTARERDRSNFKKGTHLPLCSCDHEITPNLLIKNRGFV 139
           R  +ERDR N  + +H    S  H ++PN L + R  V
Sbjct: 43  RKEKERDRYNEDRASHAHHISISHPLSPNSLYQGRASV 80


>UniRef50_Q06VN9 Cluster: DNA-directed RNA polymerase; n=1;
           Trichoplusia ni ascovirus 2c|Rep: DNA-directed RNA
           polymerase - Trichoplusia ni ascovirus 2c
          Length = 833

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
 Frame = +2

Query: 86  SCDH----EITPNLLIKNRGFVFRGFSIPCVPKSFL 181
           SC H    E   ++LIKNRGF+ RGFS    P+ ++
Sbjct: 718 SCVHSKFSETRHDVLIKNRGFITRGFSNGLDPREWI 753


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,040,490
Number of Sequences: 1657284
Number of extensions: 3367238
Number of successful extensions: 6719
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6719
length of database: 575,637,011
effective HSP length: 39
effective length of database: 511,002,935
effective search space used: 10220058700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)