Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_M18
         (410 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   5.4  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    20   9.5  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    20   9.5  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    20   9.5  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    20   9.5  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    20   9.5  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    20   9.5  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    20   9.5  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = -3

Query: 222 AYFINSNNILFSRFGSFGSCSMLGMSFIEKNAAIDIXXXXXXXXXXXSLNVAP 64
           +Y ++S+ ++FS  GSF    ML M ++    +  I           S NV P
Sbjct: 191 SYNMDSSYVIFSAMGSF-FLPMLVMLYVYGRISCVIASRHRNLEATESENVRP 242


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 246 RERAPPPNAYFINSNNILFSRFGSFGS 166
           RER+  P      SNN  +S + ++ +
Sbjct: 73  RERSKEPKIISSLSNNYKYSNYNNYNN 99


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 246 RERAPPPNAYFINSNNILFSRFGSFGS 166
           RER+  P      SNN  +S + ++ +
Sbjct: 73  RERSKEPKIISSLSNNYKYSNYNNYNN 99


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 246 RERAPPPNAYFINSNNILFSRFGSFGS 166
           RER+  P      SNN  +S + ++ +
Sbjct: 73  RERSKEPKIISSLSNNYKYSNYNNYNN 99


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 246 RERAPPPNAYFINSNNILFSRFGSFGS 166
           RER+  P      SNN  +S + ++ +
Sbjct: 73  RERSKEPKIISSLSNNYKYSNYNNYNN 99


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 246 RERAPPPNAYFINSNNILFSRFGSFGS 166
           RER+  P      SNN  +S + ++ +
Sbjct: 73  RERSKEPKIISSLSNNYKYSNYNNYNN 99


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 246 RERAPPPNAYFINSNNILFSRFGSFGS 166
           RER+  P      SNN  +S + ++ +
Sbjct: 306 RERSKEPKIISSLSNNYKYSNYNNYNN 332


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 246 RERAPPPNAYFINSNNILFSRFGSFGS 166
           RER+  P      SNN  +S + ++ +
Sbjct: 306 RERSKEPKIISSLSNNYKYSNYNNYNN 332


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,434
Number of Sequences: 438
Number of extensions: 1911
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)