Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_M17
         (413 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_6505| Best HMM Match : FA_desaturase (HMM E-Value=1.4e-40)          29   2.0  
SB_35588| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.5  
SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0)                      28   3.5  
SB_56905| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.6  
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)                   27   4.6  
SB_39349| Best HMM Match : 7tm_1 (HMM E-Value=0)                       27   6.1  
SB_40793| Best HMM Match : Toxin_30 (HMM E-Value=9.6)                  27   8.1  

>SB_6505| Best HMM Match : FA_desaturase (HMM E-Value=1.4e-40)
          Length = 361

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
 Frame = -3

Query: 252 DKFYKSLFTLFR-----FKMKIPFLIKYKSENYFLITGENRFFFSVKLVLIIL 109
           DKF+ S+ +++      F     F ++Y+   YFLI G  RF    +  L++L
Sbjct: 184 DKFFNSIKSIYHDRVMHFDGLAKFFVRYQHHLYFLIMGLARFNLYAQSFLLVL 236


>SB_35588| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1474

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = -1

Query: 407 SDSVVXESCSSTDVEE-ATERDRTSELRSE--LQSRTIFALAIIILKVTDTVQAMT 249
           S  +V ++ +  DV+  + E  RT E R E  L SRT  ALA   LK+T  +  MT
Sbjct: 745 SREMVGKALTHDDVKRMSAEEVRTYEKRYETALASRTTDALADSFLKITTKLVGMT 800


>SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0)
          Length = 919

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 309 HHFRTCHHHFKSYRHRSS 256
           HH    HHH + ++HRSS
Sbjct: 435 HHHHHHHHHHRHHKHRSS 452


>SB_56905| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 224

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -3

Query: 285 HFKSYRHRSSDDKFYKSLFTLFRFKMKIPFLIKYKSE 175
           +F +YR+  +  +  K +F   R+ +   + IKY++E
Sbjct: 26  NFNNYRYNFNTSRLCKHMFRQCRYNINFVYHIKYRAE 62


>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
          Length = 1052

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = -2

Query: 412 YIQTPLXWNPVLPRTWKRPPKETARQS*GPNYNPAPFSHLPSSF*KLPTPFKR 254
           Y Q P  +  V P  +K+ P    +        PAP+  +P+ + ++P P+KR
Sbjct: 735 YKQVPHPYKQV-PPPYKQVPPPYKQVPHPYKQVPAPYKQVPAPYKQVPPPYKR 786


>SB_39349| Best HMM Match : 7tm_1 (HMM E-Value=0)
          Length = 1125

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = -3

Query: 144  FFFSVKLVLIILICNYYYYFNS*NLIS*KRPHARNYIEKRRNVQRTRR 1
            FF+++ L ++I++    Y      L   KRP A + I++R  +QRTR+
Sbjct: 958  FFYAIPLAVVIVL----YSAIMVTLWMHKRPGAFSSIQQRYQIQRTRK 1001


>SB_40793| Best HMM Match : Toxin_30 (HMM E-Value=9.6)
          Length = 217

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 406 QTPLXWNPVLPRTWKRPPKETARQS*GPNYNPAPFS 299
           + P  +N +    W   P+        P Y+P+PFS
Sbjct: 8   RNPTPFNRLFVSPWDSSPESFTSDQLSPKYSPSPFS 43


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,270,218
Number of Sequences: 59808
Number of extensions: 182421
Number of successful extensions: 597
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 764823134
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)