Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_M17
         (413 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   0.82 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   1.4  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   5.8  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    22   7.7  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 25.4 bits (53), Expect = 0.82
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 6/65 (9%)
 Frame = -3

Query: 315  IPHHFRTCHHHFKSYRHRSSDDKFYKSLFTLFR-----FKMKIPFLIKYKSEN-YFLITG 154
            +PH   +   HF     R+ D  +YK    L+      F   +PF   Y  +N   L+T 
Sbjct: 840  LPHSEDSSEPHFSETNARAMDMSWYKRAVDLYATEPEGFVFSVPFNSGYSGKNSSTLVTA 899

Query: 153  ENRFF 139
             +  F
Sbjct: 900  SHAIF 904


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -2

Query: 385 PVLPRTWKRPPKETARQS*GPNYNPAPFSHLPSSF*KLPTPF 260
           P+LP+  + P +       GP   PAP SH P        PF
Sbjct: 137 PLLPQQQQHPHQRDT----GPALFPAPISHRPPPIAHQQAPF 174


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 318 TIPHHFRTCHHHFKSYRHRSSDD 250
           T  HH    HHH   + H ++ D
Sbjct: 495 THSHHAHPHHHHHHHHHHPTAAD 517


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = -1

Query: 62  EKDRTREIILKNDGTFNV 9
           +KD+T EI++++DG  +V
Sbjct: 69  QKDQTGEIMIEDDGANDV 86


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 351,890
Number of Sequences: 2352
Number of extensions: 7590
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)