Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_M13
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 266 8e-72
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 266 8e-72
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 102 2e-22
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 30 1.1
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 30 1.1
AF014940-10|AAK73900.1| 243|Caenorhabditis elegans Hypothetical... 29 2.0
Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical... 29 2.6
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 27 7.9
U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical pr... 27 7.9
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 27 7.9
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 27 7.9
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 27 7.9
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 27 7.9
AC093703-2|AAL77187.3| 473|Caenorhabditis elegans Hypothetical ... 27 7.9
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 266 bits (652), Expect = 8e-72
Identities = 120/202 (59%), Positives = 136/202 (67%)
Frame = +3
Query: 3 LVVQFSVKHEQDIDCGGGYLKVFDCRLDQKDMHGETPYEIMFGPDICGPGTKKVHVIFSY 182
LV+Q++VKHEQ IDCGGGY+KV D D HGETPY +MFGPDICGP T++VHVI +Y
Sbjct: 87 LVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPDICGP-TRRVHVILNY 145
Query: 183 KGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWDFLPPKKIKD 362
KG+N LIKK+I CK D THLYTLI+ DNTYEV ID E ++G LE DWD LP KKIKD
Sbjct: 146 KGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDWDLLPAKKIKD 205
Query: 363 PEAKKPEDWXXXXXXXXXXXXXXXXXXXXXHIPDPDASKPXXXXXXXXXXXXPTMIDNPD 542
P+AKKPEDW HIPDPDA KP P MIDNP+
Sbjct: 206 PDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWDDEMDGEWEPPMIDNPE 265
Query: 543 YKGVWAPKQIDDPAYKGPWIHP 608
YKG W PKQI +PAYKG WIHP
Sbjct: 266 YKGEWKPKQIKNPAYKGKWIHP 287
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 266 bits (652), Expect = 8e-72
Identities = 120/202 (59%), Positives = 136/202 (67%)
Frame = +3
Query: 3 LVVQFSVKHEQDIDCGGGYLKVFDCRLDQKDMHGETPYEIMFGPDICGPGTKKVHVIFSY 182
LV+Q++VKHEQ IDCGGGY+KV D D HGETPY +MFGPDICGP T++VHVI +Y
Sbjct: 87 LVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPDICGP-TRRVHVILNY 145
Query: 183 KGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWDFLPPKKIKD 362
KG+N LIKK+I CK D THLYTLI+ DNTYEV ID E ++G LE DWD LP KKIKD
Sbjct: 146 KGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDWDLLPAKKIKD 205
Query: 363 PEAKKPEDWXXXXXXXXXXXXXXXXXXXXXHIPDPDASKPXXXXXXXXXXXXPTMIDNPD 542
P+AKKPEDW HIPDPDA KP P MIDNP+
Sbjct: 206 PDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWDDEMDGEWEPPMIDNPE 265
Query: 543 YKGVWAPKQIDDPAYKGPWIHP 608
YKG W PKQI +PAYKG WIHP
Sbjct: 266 YKGEWKPKQIKNPAYKGKWIHP 287
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 102 bits (245), Expect = 2e-22
Identities = 77/241 (31%), Positives = 101/241 (41%), Gaps = 40/241 (16%)
Frame = +3
Query: 6 VVQFSVKHEQDIDCGGGYLKVFD--CRLDQKDMHGETPYEIMFGPDICGPGTKKVHVIFS 179
VVQ+ +K E+ +CGGGYLK+ D + +T Y IMFGPD CG T KVH+IF
Sbjct: 139 VVQYDIKFEEGQECGGGYLKLLSEGAEKDLANFQDKTAYTIMFGPDKCG-ATGKVHLIFR 197
Query: 180 YKGKNHLIKKDIRCK----------DDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEAD 329
YK + + DD THL+TL+VKP Y V +D + + G + +D
Sbjct: 198 YKNPINGTISEYHANQPTTIGSTYWDDHNTHLFTLVVKPTGEYSVSVDGKSLYYGNMMSD 257
Query: 330 WD--FLPPKKI-----------------KDPEAKKPEDWXXXXXXXXXXXXXXXXXXXXX 452
PPK+I +D A KP+DW
Sbjct: 258 VTPALTPPKQIFDETDLKPVDWDERENIEDESAVKPDDWDENEPQSVVDEAATKPYDWNE 317
Query: 453 H----IPDPDASKPXXXXXXXXXXXXPTMIDNPDYKGV-----WAPKQIDDPAYKGPWIH 605
I DP+A KP +IDNP KG+ W I +P YKG WI
Sbjct: 318 EENELIADPEAKKPQDWDEDMDGSWEAPLIDNPACKGLSGCGTWKAPTIKNPKYKGKWIR 377
Query: 606 P 608
P
Sbjct: 378 P 378
Score = 45.2 bits (102), Expect = 4e-05
Identities = 33/114 (28%), Positives = 42/114 (36%)
Frame = +3
Query: 258 VKPDNTYEVLIDNEKVESGELEADWDFLPPKKIKDPEAKKPEDWXXXXXXXXXXXXXXXX 437
VKPD+ E + E+ DW+ + I DPEAKKP+DW
Sbjct: 291 VKPDDWDENEPQSVVDEAATKPYDWNEEENELIADPEAKKPQDWDEDMDGSWEA------ 344
Query: 438 XXXXXHIPDPDASKPXXXXXXXXXXXXPTMIDNPDYKGVWAPKQIDDPAYKGPW 599
P P I NP YKG W +I +PA+KG W
Sbjct: 345 ---------PLIDNPACKGLSGCGTWKAPTIKNPKYKGKWIRPKISNPAFKGKW 389
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 189 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVES 311
K I+K++ C+D THL L D+TY V ++ NE+V++
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDN 12895
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 189 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVES 311
K I+K++ C+D THL L D+TY V ++ NE+V++
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDN 12895
>AF014940-10|AAK73900.1| 243|Caenorhabditis elegans Hypothetical
protein W02D7.10 protein.
Length = 243
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 501 SHHPNLQAYWHQGPECAQVCPSPRVSCLPGRGLWVCRP 388
+ +PN YW G Q+ P P V G+ L+ P
Sbjct: 168 TQYPNQTYYWSDGSASEQMVPQPEVIAPGGKALYTFDP 205
>Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical
protein M01B2.6 protein.
Length = 450
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +1
Query: 298 RRLNLVN*KPTGTSYLRRRSRIQKQRNLKIGTTNPQSPTRKTRNPRTGTNLSTFRTLMPV 477
R + L++ K G Y+ RRS +QK NL + S T N T L TF +
Sbjct: 339 RNVTLIDGKAVGEVYMPRRSALQKGYNLSSYNYDDLSETAFIYNSTTKEYL-TFEVKRSI 397
Query: 478 SLKIGMMRWM 507
+ K+ ++ M
Sbjct: 398 AAKLDYVQNM 407
>AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical
protein Y105E8B.7 protein.
Length = 269
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 234 YTHLYTLIVKPDN-TYEVLIDNEKVESGELEADWDFLPP 347
+TH +TL VKP N Y+ DN+ ++ + E F P
Sbjct: 23 HTHKWTLFVKPGNRDYDEFPDNKLIQKVKFEIHESFAQP 61
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -3
Query: 507 HPSHHPNLQAYWH--QGPECAQV-CPSPRV 427
HP HHP+LQ ++H Q A CPS V
Sbjct: 1620 HPPHHPHLQNHYHPPQNHTSATAPCPSAMV 1649
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -3
Query: 507 HPSHHPNLQAYWH--QGPECAQV-CPSPRV 427
HP HHP+LQ ++H Q A CPS V
Sbjct: 1781 HPPHHPHLQNHYHPPQNHTSATAPCPSAMV 1810
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -3
Query: 492 PNLQAYWHQGPECAQVCPSPRVSCLPGRGLWVCRPN 385
PN +G + CP+P C P G VC PN
Sbjct: 1121 PNFYGLTSEGCTECEPCPAPGQVCDPIDGSCVCPPN 1156
>U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical
protein T12E12.2 protein.
Length = 891
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 289 STMRRLNLVN*KPTGTSYLRRRSRIQKQRNLKIGTTNPQSPTRKTRNP 432
ST RR++L + K YL+ I+++R K Q+ + +NP
Sbjct: 100 STWRRISLASEKCVTNRYLKTDDEIEEKRARKKAKLEEQNRKEQAKNP 147
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical protein
B0496.3a protein.
Length = 1551
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 328 TGTSYLRRRSRIQKQRNLKIGT 393
+ ++Y+RR++R ++QRN IGT
Sbjct: 1038 SASAYIRRKNRERRQRNRTIGT 1059
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical protein
B0496.3b protein.
Length = 1592
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 328 TGTSYLRRRSRIQKQRNLKIGT 393
+ ++Y+RR++R ++QRN IGT
Sbjct: 1079 SASAYIRRKNRERRQRNRTIGT 1100
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -3
Query: 492 PNLQAYWHQGPECAQVCPSPRVSCLPGRGLWVCRPN 385
PN +G + CP+P C P G VC PN
Sbjct: 1121 PNFYGLTSEGCTECEPCPAPGQVCDPIDGSCVCPPN 1156
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -3
Query: 492 PNLQAYWHQGPECAQVCPSPRVSCLPGRGLWVCRPN 385
PN +G + CP+P C P G VC PN
Sbjct: 1121 PNFYGLTSEGCTECEPCPAPGQVCDPIDGSCVCPPN 1156
>AC093703-2|AAL77187.3| 473|Caenorhabditis elegans Hypothetical
protein Y20F4.2 protein.
Length = 473
Score = 27.5 bits (58), Expect = 7.9
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -3
Query: 510 LHPSHHPNLQAYWHQGPECAQ-VCPSPRVSCLPGRGLWVCRPNLQVSLLLDP*SSSEVGS 334
+HP HH Q +HQ P Q P P P + Q S L P S+ GS
Sbjct: 192 MHPHHHQQQQMAFHQMPHYLQNSMPGPSGMMAPN------SQSQQHSPQLTP-QGSQQGS 244
Query: 333 PSRLLIHQIQP 301
P + + HQI P
Sbjct: 245 PVQ-MHHQIPP 254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,245,958
Number of Sequences: 27780
Number of extensions: 310252
Number of successful extensions: 863
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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