Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_M13
(608 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to SP|Q... 227 4e-60
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 225 2e-59
At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to simi... 202 1e-52
At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin... 103 9e-23
At5g07340.1 68418.m00838 calnexin, putative identical to calnexi... 98 3e-21
At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to simi... 85 3e-17
At1g74170.1 68414.m08590 leucine-rich repeat family protein cont... 31 0.60
At3g31540.1 68416.m04025 hypothetical protein 31 0.79
At1g74190.1 68414.m08592 leucine-rich repeat family protein cont... 30 1.0
At3g21330.1 68416.m02694 basic helix-loop-helix (bHLH) family pr... 28 5.6
At1g12130.1 68414.m01405 flavin-containing monooxygenase family ... 28 5.6
At4g01050.1 68417.m00142 hydroxyproline-rich glycoprotein family... 27 7.4
At3g18670.1 68416.m02371 ankyrin repeat family protein contains ... 27 7.4
At3g56640.1 68416.m06298 exocyst complex subunit Sec15-like fami... 27 9.7
>At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to
SP|Q38858 Calreticulin 2 precursor {Arabidopsis
thaliana}
Length = 424
Score = 227 bits (555), Expect = 4e-60
Identities = 105/203 (51%), Positives = 124/203 (61%), Gaps = 1/203 (0%)
Frame = +3
Query: 3 LVVQFSVKHEQDIDCGGGYLKVFDCRLDQKDMHGETPYEIMFGPDICGPGTKKVHVIFSY 182
LV QFSVKHEQ +DCGGGY+K+ +DQK G+TPY IMFGPDICG TKKVH I +Y
Sbjct: 94 LVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTY 153
Query: 183 KGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWDFLPPKKIKD 362
NHLIKKD+ C+ D TH+YT I++PD TY +LIDN + ++G L +DWD LPPKKIKD
Sbjct: 154 NEANHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYSDWDLLPPKKIKD 213
Query: 363 PEAKKPEDWXXXXXXXX-XXXXXXXXXXXXXHIPDPDASKPXXXXXXXXXXXXPTMIDNP 539
P AKKPEDW IPD D+ KP I NP
Sbjct: 214 PSAKKPEDWDEQEYISDPEDKKPDGYDDIPKEIPDTDSKKPEDWDDEEDGEWTAPTIPNP 273
Query: 540 DYKGVWAPKQIDDPAYKGPWIHP 608
+Y G W PKQI +P YKG W P
Sbjct: 274 EYMGEWKPKQIKNPNYKGKWEAP 296
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 225 bits (550), Expect = 2e-59
Identities = 103/203 (50%), Positives = 124/203 (61%), Gaps = 1/203 (0%)
Frame = +3
Query: 3 LVVQFSVKHEQDIDCGGGYLKVFDCRLDQKDMHGETPYEIMFGPDICGPGTKKVHVIFSY 182
LV QFSVKHEQ +DCGGGY+K+ +DQ G+TPY IMFGPDICG TKKVH I +Y
Sbjct: 94 LVFQFSVKHEQKLDCGGGYMKLLSDDVDQTKFGGDTPYSIMFGPDICGYSTKKVHAILTY 153
Query: 183 KGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWDFLPPKKIKD 362
G NHLIKK++ C+ D TH+YT +++PD TY +LIDN + ++G L +DWD LP KKIKD
Sbjct: 154 NGTNHLIKKEVPCETDQLTHVYTFVLRPDATYSILIDNVEKQTGSLYSDWDLLPAKKIKD 213
Query: 363 PEAKKPEDWXXXXXX-XXXXXXXXXXXXXXXHIPDPDASKPXXXXXXXXXXXXPTMIDNP 539
P AKKPEDW IPD DA KP I NP
Sbjct: 214 PSAKKPEDWDDKEYIPDPEDTKPAGYDDIPKEIPDTDAKKPEDWDDEEDGEWTAPTIPNP 273
Query: 540 DYKGVWAPKQIDDPAYKGPWIHP 608
+Y G W PK+I +PAYKG W P
Sbjct: 274 EYNGEWKPKKIKNPAYKGKWKAP 296
>At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 424
Score = 202 bits (494), Expect = 1e-52
Identities = 95/203 (46%), Positives = 122/203 (60%), Gaps = 1/203 (0%)
Frame = +3
Query: 3 LVVQFSVKHEQDIDCGGGYLKVFDCRLDQKDMHGETPYEIMFGPDICGPGTKKVHVIFSY 182
LVVQ+SVK EQDI+CGG Y+K+ ++QK G+TPY +MFGPDICG TKK+HVI SY
Sbjct: 100 LVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSLMFGPDICGTQTKKLHVIVSY 159
Query: 183 KGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWDFLPPKKIKD 362
+G+N+ IKKD++C+ D H YT I++PD +Y VL+DN++ E G + DWD LPP+KIK
Sbjct: 160 QGQNYPIKKDLQCETDKLNHFYTFILRPDASYSVLVDNKEREFGSMYTDWDILPPRKIKV 219
Query: 363 PEAKKPEDWXXXXXXXX-XXXXXXXXXXXXXHIPDPDASKPXXXXXXXXXXXXPTMIDNP 539
AKKPEDW IPD A +P P I N
Sbjct: 220 KNAKKPEDWDDREYIDDPNDVKPEGFDSIPREIPDRKAKEPEDWDEEENGLWEPPKIPNS 279
Query: 540 DYKGVWAPKQIDDPAYKGPWIHP 608
YKG W K+I +P YKG W +P
Sbjct: 280 AYKGPWKAKRIKNPNYKGKWKNP 302
>At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin
homolog 1, Arabidopsis thaliana, EMBL:AT08315
[SP|P29402]
Length = 530
Score = 103 bits (247), Expect = 9e-23
Identities = 56/142 (39%), Positives = 78/142 (54%), Gaps = 13/142 (9%)
Frame = +3
Query: 3 LVVQFSVKHEQDIDCGGGYLKVF---DCRLDQKDMHGETPYEIMFGPDICGPGTKKVHVI 173
+V+Q+ V+ ++ ++CGG YLK + + E+PY IMFGPD CG GT KVH I
Sbjct: 94 VVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMFGPDKCG-GTNKVHFI 152
Query: 174 FSYKGKN------HLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWD 335
+K H +K D +H+YT I+KPDN +L+D E+ + L + D
Sbjct: 153 LKHKNPKSGEYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKKKANLLSGED 212
Query: 336 F----LPPKKIKDPEAKKPEDW 389
F +P K I DPE KKPEDW
Sbjct: 213 FEPALIPAKTIPDPEDKKPEDW 234
Score = 46.4 bits (105), Expect = 1e-05
Identities = 30/110 (27%), Positives = 42/110 (38%)
Frame = +3
Query: 258 VKPDNTYEVLIDNEKVESGELEADWDFLPPKKIKDPEAKKPEDWXXXXXXXXXXXXXXXX 437
VKP++ E + E E W P+++ DPEA KPEDW
Sbjct: 246 VKPEDWDEDAPMEIEDEEAEKPEGWLDDEPEEVDDPEATKPEDWDDEEDGMWEAPKIDNP 305
Query: 438 XXXXXHIPDPDASKPXXXXXXXXXXXXPTMIDNPDYKGVWAPKQIDDPAY 587
+ +P +IDNP YKG+W P+ I +P Y
Sbjct: 306 KCEAAP-GCGEWKRPMKRNPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDY 354
>At5g07340.1 68418.m00838 calnexin, putative identical to calnexin
homolog 2 from Arabidopsis thaliana [SP|Q38798], strong
similarity to calnexin homolog 1, Arabidopsis thaliana,
EMBL:AT08315 [SP|P29402]; contains Pfam profile PF00262
calreticulin family
Length = 532
Score = 98.3 bits (234), Expect = 3e-21
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 13/142 (9%)
Frame = +3
Query: 3 LVVQFSVKHEQDIDCGGGYLKVF---DCRLDQKDMHGETPYEIMFGPDICGPGTKKVHVI 173
+V+Q+ + ++ ++CGG YLK + + ++PY IMFGPD CG T KVH I
Sbjct: 96 VVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQGFDNDSPYSIMFGPDKCG-ATNKVHFI 154
Query: 174 FSYKGKN------HLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWD 335
+K H +K D+ +H+YT ++K DN +L+D E+ + G L + D
Sbjct: 155 LKHKNPKSGEFVEHHLKFPPSVPFDMLSHVYTAVLKSDNEVRILVDGEEKKKGNLLSAED 214
Query: 336 FLPP----KKIKDPEAKKPEDW 389
F PP K I DPE KKPEDW
Sbjct: 215 FEPPLIPSKTIPDPEDKKPEDW 236
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/110 (28%), Positives = 42/110 (38%)
Frame = +3
Query: 258 VKPDNTYEVLIDNEKVESGELEADWDFLPPKKIKDPEAKKPEDWXXXXXXXXXXXXXXXX 437
VKPD+ E + E E W P +++DPEA KPEDW
Sbjct: 248 VKPDDWDEDAPMEIEDEEAEKPEGWLDDEPVEVEDPEASKPEDWDDEEDGEWEAPKVSNT 307
Query: 438 XXXXXHIPDPDASKPXXXXXXXXXXXXPTMIDNPDYKGVWAPKQIDDPAY 587
+ +P +IDNP YKG+W P+ I +P Y
Sbjct: 308 KCEAAP-GCGEWKRPMKRNPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDY 356
>At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 370
Score = 85.4 bits (202), Expect = 3e-17
Identities = 44/115 (38%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Frame = +3
Query: 267 DNTYEVLIDNEKVESGELEADWDFLPPKKIKDPEAKKPEDWXXXXXXXX-XXXXXXXXXX 443
D Y VL+DN++ E G + DWD LPP+KIK AKKPEDW
Sbjct: 134 DTPYSVLVDNKEREFGSMYTDWDILPPRKIKVKNAKKPEDWDDREYIDDPNDVKPEGFDS 193
Query: 444 XXXHIPDPDASKPXXXXXXXXXXXXPTMIDNPDYKGVWAPKQIDDPAYKGPWIHP 608
IPD A +P P I N YKG W K+I +P YKG W +P
Sbjct: 194 IPREIPDRKAKEPEDWDEEENGLWEPPKIPNSAYKGPWKAKRIKNPNYKGKWKNP 248
Score = 54.4 bits (125), Expect = 6e-08
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +3
Query: 3 LVVQFSVKHEQDIDCGGGYLKVFDCRLDQKDMHGETPYEIM 125
LVVQ+SVK EQDI+CGG Y+K+ ++QK G+TPY ++
Sbjct: 100 LVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSVL 140
>At1g74170.1 68414.m08590 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1068
Score = 31.1 bits (67), Expect = 0.60
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 9 VQFSVKHEQDIDCGGGYLKVFDCRLDQKDMHGETPYEI 122
++F+ KH D GG +F L + ++ GE P E+
Sbjct: 830 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVEL 867
>At3g31540.1 68416.m04025 hypothetical protein
Length = 699
Score = 30.7 bits (66), Expect = 0.79
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 189 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEADWDFLPP 347
KN I + CKDD YT + + D E L+ + G L+ FL P
Sbjct: 252 KNMKIIEGFPCKDDAYTDYFFFVALEDAVLEDLVGKVLTKWGILDRPIRFLEP 304
>At1g74190.1 68414.m08592 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.1
[Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
Length = 965
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 9 VQFSVKHEQDIDCGGGYLKVFDCRLDQKDMHGETPYE 119
++F+ KH D GG +F L + ++ GE P E
Sbjct: 762 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVE 798
>At3g21330.1 68416.m02694 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 373
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 367 KQRNLKIGTTNPQSPTRKTRNPRTGTNLSTFRTLMPVSLKI 489
K++N+KI +T+PQ+ + R R + +TL+P K+
Sbjct: 269 KRKNVKI-STDPQTVAARQRRERISEKIRVLQTLVPGGTKM 308
>At1g12130.1 68414.m01405 flavin-containing monooxygenase family
protein / FMO family protein contains similarity to
flavin-containing monooxygenase 2 (FMO2) from Homo
sapiens [GI:1834493]; contains Pfam profile PF00743
Flavin-binding monooxygenase-like
Length = 470
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/18 (61%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
Frame = -3
Query: 408 GLWVCRPNLQVSLL-LDP 358
GLWVC PN++ LL +DP
Sbjct: 47 GLWVCTPNVEPDLLSIDP 64
>At4g01050.1 68417.m00142 hydroxyproline-rich glycoprotein family
protein
Length = 466
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 DMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKK-DIRCKDDVYTHLYTL 254
D+ + + P+I G G K V +++ + K +KK ++ KD T LY L
Sbjct: 152 DIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYIL 206
>At3g18670.1 68416.m02371 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 598
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 255 IVKPDNTYEVLIDNEKVESGELEADWDFLPPKKIKDPEA 371
I + ++TY VL N ++SGELEA DFL ++PEA
Sbjct: 43 IRQENSTYLVLFKN--IDSGELEATKDFLD----RNPEA 75
>At3g56640.1 68416.m06298 exocyst complex subunit Sec15-like family
protein contains Pfam profile PF04091: Exocyst complex
subunit Sec15-like
Length = 789
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 189 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGELEAD 329
KN KK+ +D TH IV D VL+D E+++S +L +D
Sbjct: 53 KNVARKKEAEIEDLCKTHYEEFIVAVDELRGVLVDAEELKS-DLASD 98
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,687,746
Number of Sequences: 28952
Number of extensions: 296720
Number of successful extensions: 793
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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