Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_M12
(530 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0026 + 19966616-19966703,19967992-19968058,19968599-199686... 31 0.76
03_01_0136 + 1069136-1069292,1070783-1071060,1071246-1071602,107... 29 2.3
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739... 29 3.1
07_03_0521 + 19016824-19017000,19017064-19017099,19017860-190186... 29 3.1
09_03_0130 - 12609417-12610462,12610786-12611040,12611139-126112... 28 4.1
05_01_0074 + 506803-507963 28 4.1
01_01_0365 - 2859617-2859722,2860047-2860489,2862232-2862391,286... 28 5.4
01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,260... 28 5.4
09_02_0449 - 9461385-9461431,9461487-9461628,9461733-9461831,946... 27 7.1
09_02_0201 + 5728377-5728584,5729044-5729153,5729231-5729286,572... 27 7.1
08_02_1009 - 23527880-23527884,23528437-23528728 27 7.1
04_04_0397 - 24921892-24922947,24923486-24923734,24923807-249241... 27 7.1
05_04_0243 + 19338682-19339038,19339751-19339867,19340360-193405... 27 9.4
05_01_0318 - 2488529-2489196,2489773-2490372,2490620-2490773,249... 27 9.4
03_03_0273 - 16083340-16083565,16084165-16084202 27 9.4
>03_05_0026 +
19966616-19966703,19967992-19968058,19968599-19968677,
19969140-19969231,19969961-19970396,19973749-19974099
Length = 370
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 162 ISNFKGLKFTSNDLNEGAQVLRSLKEGQE----MFLGAD-TLLAPAALLG 296
+++ KGL T DL ++LRSL+E E M + +D + + PA+LLG
Sbjct: 167 VNDLKGLGATYTDLEVAQKMLRSLQEKYETLVTMLINSDMSRMTPASLLG 216
>03_01_0136 +
1069136-1069292,1070783-1071060,1071246-1071602,
1071706-1072119,1072221-1072302,1072429-1073093
Length = 650
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 93 YHIPSMSRVEINMPAFVKEATARISNFKGLKFTSNDLNE 209
+H + +VEI K+ R+ N +G+K +NDL E
Sbjct: 364 HHESARLQVEIADMEVFKDEKKRVENLRGVKLVNNDLGE 402
>07_03_1567 - 27772815-27773302,27773471-27773561,27773641-27773988,
27774929-27775110,27775191-27775368,27775453-27775605,
27775993-27776232,27776369-27776449,27776485-27776730,
27777151-27777240,27777536-27777778,27778365-27778529,
27779017-27779080,27779162-27779286,27779383-27779476,
27779647-27779714,27779798-27779989,27780618-27780752,
27780847-27780934,27781014-27781107,27781484-27781547,
27781657-27781708,27781911-27782014,27782099-27782158,
27782687-27782770,27782892-27783125,27783442-27783864,
27784675-27784736,27784867-27785521
Length = 1700
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 300 KSSIGTSFNLFPKLARDILDAIENNDIAKARALQEKLSLAIEAH 431
KSS+ LF L DA++NN AK L + +A++AH
Sbjct: 1244 KSSVDQQLELFTLLIEGCQDAVKNNMDAKGTVL-DFFGVAVKAH 1286
>07_03_0521 +
19016824-19017000,19017064-19017099,19017860-19018624,
19018772-19018864,19018944-19019114,19019206-19019397,
19019443-19019530,19019617-19019685,19019841-19020054,
19020136-19020334,19020406-19020504,19020594-19020850,
19020927-19021002,19021091-19021204
Length = 849
Score = 28.7 bits (61), Expect = 3.1
Identities = 27/129 (20%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Frame = +3
Query: 6 LYFKPATVAELVSYVELVANAAPKLPVLYY-HIPSMSRVEINMPAFVKEATARISNFKGL 182
L F+ +A ++ ++V+ P P Y + M N P + + +S+ +
Sbjct: 325 LMFEDNQIAMMIQQ-DIVSKHNPGYPFPRYGKLQLMKAPRENYPQAPEVSPLNLSSVSKI 383
Query: 183 KFTSNDLNEGAQVLRSLKEGQEMFLGADTLLAPAALLGIKSSIGTSFNLFPKLARDILDA 362
+ ND GA +++ L E L ++ P A +KS + FN ++ I D
Sbjct: 384 QCRGND--GGANLIKFL-ESHFNSLDVSAMVGPQAYKELKSYVQDGFNQIDEILPSIADF 440
Query: 363 IENNDIAKA 389
++ +++ A
Sbjct: 441 VDISNLKTA 449
>09_03_0130 -
12609417-12610462,12610786-12611040,12611139-12611253,
12611376-12611428,12611854-12612114,12612252-12612302,
12612412-12612660,12612779-12613007,12613292-12613666
Length = 877
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 490 IPVAISIPAFIIGTHAPSAVCASMAKLSFSCKALALAMSLF 368
+P + P F+I T A +M +FSC A+A+ F
Sbjct: 443 VPEILFWPVFVIATLAAMIASQAMISATFSCIKQAMALGCF 483
>05_01_0074 + 506803-507963
Length = 386
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -2
Query: 355 SISRASLGNRLNEVPILDFMPRSAAGANSVSAPRNISWPSLRERKTWAPSLR 200
++ R + G R E + G N+ APR ISW S + R T ++R
Sbjct: 272 AVGRFAGGRRPEERELPVVYTEMDGGFNNGGAPRRISWGSRQSRSTERSAIR 323
>01_01_0365 -
2859617-2859722,2860047-2860489,2862232-2862391,
2863431-2863516,2863648-2866272
Length = 1139
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -2
Query: 499 PTLI-PVAISIPAFIIGTHAPSAVCASMAKLSFSCKALALAMSLFSIASSISRASLGNRL 323
P L+ PV++S+ A + +PS+ +S + + L+LA S S +SS S S + L
Sbjct: 60 PHLVSPVSLSLLALSFLSSSPSSSSSSFSSRHAASLLLSLASSAPSSSSSFSSLSHASSL 119
Query: 322 NEVP 311
+ P
Sbjct: 120 SAFP 123
>01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,
2602637-2602810,2603032-2603098,2603735-2603757,
2603899-2604001,2604087-2604848,2605098-2605292,
2605496-2606115,2606429-2606480,2606558-2607197,
2608366-2608574,2608660-2609189,2609500-2609566,
2609651-2609728,2610415-2610483,2610569-2610643
Length = 2021
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 378 IAKARALQEKLSLAIEAHTAEGAWVPIMKAGMEIATGIKVGPPSLP 515
+AK +A Q K + ++++ +EG VP+ + + +TG+ V SLP
Sbjct: 1177 MAKMKAEQSKFAESMKSSGSEGQDVPMSEPDVSCSTGV-VSEESLP 1221
>09_02_0449 -
9461385-9461431,9461487-9461628,9461733-9461831,
9462052-9462100,9462179-9462212,9462880-9463055,
9463094-9463532,9463784-9463971,9463988-9464496
Length = 560
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -2
Query: 478 ISIPAFIIGTHAPSAVCASMAKLSFSCKALALAMSLFSIASSIS 347
+S+PA +IG A +AV A+ C +LA+A FS S+++
Sbjct: 236 LSLPALLIGACAAAAVAAAGDGCRAGC-SLAIAAYYFSEGSNLT 278
>09_02_0201 +
5728377-5728584,5729044-5729153,5729231-5729286,
5729396-5729480,5729550-5729597,5729723-5729797,
5729893-5730004,5730371-5730536,5730579-5730630,
5730729-5730786,5731029-5731127,5731219-5731349
Length = 399
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 220 TWAPSLRSFEVNLRPLKFD 164
TW P+L FE +LR KFD
Sbjct: 103 TWVPALNIFETSLRRGKFD 121
>08_02_1009 - 23527880-23527884,23528437-23528728
Length = 98
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 384 KARALQEKLSLAIEAHTAEGAWV 452
+ARA++ K+ LA EA EG W+
Sbjct: 10 EARAVEMKVGLAREARPMEGGWI 32
>04_04_0397 -
24921892-24922947,24923486-24923734,24923807-24924157,
24924244-24924331,24924466-24924563,24925141-24925362,
24925490-24925585,24926410-24926481,24927156-24927305
Length = 793
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = +3
Query: 132 PAFVKEATARISNFKGLK-FTSNDLNEGAQVLRSLKEGQEMFLGADTLLAPAALLGIKSS 308
P F+ + + K F + DL G + +L E +G D LAPA + +
Sbjct: 677 PNFIDPLVRLLEHLHAKKIFKTEDLKTGCLLYAALLED----IGIDLPLAPALFGEVVAR 732
Query: 309 IGTSFNLFPKLARDILDAIENNDIAK 386
+ S L ++ +IL A+E+ K
Sbjct: 733 LSLSCGLSFEVVEEILKAVEDTYFRK 758
>05_04_0243 +
19338682-19339038,19339751-19339867,19340360-19340596,
19340926-19341078,19341188-19341263,19341600-19341626,
19342188-19342252,19342830-19342904,19343306-19343449,
19343550-19343600
Length = 433
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = -2
Query: 514 GSDGGPTLI------PVAISIPAFIIGTHAPSAVCASMAKLSFSCKALALAMSLFSIASS 353
GSDG P+L+ P I +P T+ S + L F+ K L++A + ++ +
Sbjct: 178 GSDGAPSLVQTRTPPPSVIGLPNIPTSTNGYSYTIMKLGPLQFTRKGLSVASTSACLSFA 237
Query: 352 ISRAS 338
I +++
Sbjct: 238 IFQSA 242
>05_01_0318 -
2488529-2489196,2489773-2490372,2490620-2490773,
2490996-2491085,2491926-2492061,2492159-2492418,
2493448-2493846,2494482-2494661,2494728-2494922,
2496614-2496678,2497186-2497321,2497442-2497483,
2498351-2498689
Length = 1087
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 337 LGNRLNEVPILDFM--PRSAAGANSVSAPRNISWPSLRERKTWAPSLRSFEVNLRP 176
LG + + ++ ++ + G + + AP+ + E KTWAPS+ + + RP
Sbjct: 494 LGKTIQTIALIAYLLEKKEVTGPHLIIAPKAVLPNWSNEFKTWAPSIGTILYDGRP 549
>03_03_0273 - 16083340-16083565,16084165-16084202
Length = 87
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = -2
Query: 349 SRASLGNRLNEVPILDFMPRSAAGANSVSAPRNISWPSLRERKT--WAPSLRSFEVNLRP 176
+RA + R ++ A+ A + +A R+++W +R+ KT WAP R EV+
Sbjct: 21 ARAVVTTRASDAAAAGRRTDVASAATAATAKRDVAW--MRDPKTGCWAPENRVDEVDAVD 78
Query: 175 LK 170
L+
Sbjct: 79 LR 80
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,517,252
Number of Sequences: 37544
Number of extensions: 288672
Number of successful extensions: 784
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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