Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_M12
(530 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g45620.1 68415.m05672 nucleotidyltransferase family protein l... 31 0.64
At1g60160.1 68414.m06777 potassium transporter family protein si... 29 1.5
At3g02125.1 68416.m00179 hypothetical protein 29 2.0
At5g15740.1 68418.m01841 expressed protein contains Pfam PF03138... 29 2.6
At3g54240.1 68416.m05995 hydrolase, alpha/beta fold family prote... 28 4.5
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 28 4.5
At2g26340.1 68415.m03160 expressed protein 28 4.5
At4g32640.1 68417.m04646 sec23/sec24 transport protein-related 27 6.0
At2g05990.2 68415.m00652 enoyl-[acyl-carrier protein] reductase ... 27 6.0
At2g05990.1 68415.m00651 enoyl-[acyl-carrier protein] reductase ... 27 6.0
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 27 7.9
At3g44330.1 68416.m04763 expressed protein 27 7.9
At3g13590.1 68416.m01711 DC1 domain-containing protein contains ... 27 7.9
>At2g45620.1 68415.m05672 nucleotidyltransferase family protein low
similarity to SP|O13833| Caffeine-induced death protein
1 {Schizosaccharomyces pombe}; contains Pfam profiles
PF03828: PAP/25A associated domain, PF01909:
Nucleotidyltransferase domain
Length = 764
Score = 30.7 bits (66), Expect = 0.64
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Frame = +3
Query: 231 LKEGQEMFLGADTLLA---PAALLGIKSSIGTSFNLFPKLARDILDAIENNDIAKARALQ 401
L++ +++ + L+A P A L + S SF FPK D+ AIE +DI K+ L
Sbjct: 452 LEKQRQLMAHLENLVAKEWPHAKLYLYGSCANSFG-FPKSDIDVCLAIEGDDINKSEMLL 510
Query: 402 EKLSLAIEAHTAEG------AWVPIMKAGMEIATGI 491
KL+ +E+ + A VPI+K M+ TGI
Sbjct: 511 -KLAEILESDNLQNVQALTRARVPIVKL-MDPVTGI 544
>At1g60160.1 68414.m06777 potassium transporter family protein
similar to potassium transporter HAK2p [Mesembryanthemum
crystallinum] gi|14091471|gb|AAK53759; KUP/HAK/KT
Transporter family member, PMID:11500563; contains Pfam
profile PF02705: K+ potassium transporter
Length = 827
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 490 IPVAISIPAFIIGTHAPSAVCASMAKLSFSCKALALAMSLF 368
+P ++ P F+I T A +M +FSC A+A+ F
Sbjct: 399 VPKSLFWPVFVIATLAAMIASQAMISATFSCVKQAMALGCF 439
>At3g02125.1 68416.m00179 hypothetical protein
Length = 355
Score = 29.1 bits (62), Expect = 2.0
Identities = 26/80 (32%), Positives = 35/80 (43%)
Frame = -2
Query: 451 THAPSAVCASMAKLSFSCKALALAMSLFSIASSISRASLGNRLNEVPILDFMPRSAAGAN 272
T PS+V +S S +LA SLFSI S RL E+P + N
Sbjct: 92 TRIPSSVFSSKPGNSTEW-SLASNESLFSIHDGNFSISTALRLAEIPRFEETVHVITEIN 150
Query: 271 SVSAPRNISWPSLRERKTWA 212
SV P + P+ E++T A
Sbjct: 151 SVPLPPPVKKPNEYEKETIA 170
>At5g15740.1 68418.m01841 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown;
Length = 508
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +3
Query: 18 PATVAELVSYVELVANAAPKLPVLYYHIPSMSRVEINMPAFVKEATARISNFKGLKFTSN 197
P + + + Y + K VL+ + +P V++ R+ NF GLKFT
Sbjct: 197 PISWSNMSYYQNQILPLVKKHKVLHLNRTDTRLANNGLPVEVQKLRCRV-NFNGLKFTPQ 255
Query: 198 DLNEGAQVLRSLKE 239
G +V++ L+E
Sbjct: 256 IEELGRRVVKILRE 269
>At3g54240.1 68416.m05995 hydrolase, alpha/beta fold family protein
low similarity to SP|P22862|ESTE_PSEFL Arylesterase (EC
3.1.1.2) (Aryl-ester hydrolase) {Pseudomonas
fluorescens}; contains Pfam profile PF00561: hydrolase,
alpha/beta fold family
Length = 350
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 310 ILDFMPRSAAGANSVSAPRNISWPSLRERKTW 215
+L ++P AGA + N WPS + TW
Sbjct: 155 VLKYIPHRLAGATLLCPVTNSWWPSFPDSLTW 186
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/71 (22%), Positives = 31/71 (43%)
Frame = +3
Query: 216 QVLRSLKEGQEMFLGADTLLAPAALLGIKSSIGTSFNLFPKLARDILDAIENNDIAKARA 395
QVL L EG F+G T + +K ++ L +D+ +E + I +
Sbjct: 535 QVLSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLETDVIVQLSE 594
Query: 396 LQEKLSLAIEA 428
++ L + +E+
Sbjct: 595 CRQHLEILLES 605
>At2g26340.1 68415.m03160 expressed protein
Length = 230
Score = 27.9 bits (59), Expect = 4.5
Identities = 24/92 (26%), Positives = 44/92 (47%)
Frame = +3
Query: 150 ATARISNFKGLKFTSNDLNEGAQVLRSLKEGQEMFLGADTLLAPAALLGIKSSIGTSFNL 329
A A+ ++ G T+ D + + LR+L+E +FL A + A ++ +KS +GT+
Sbjct: 125 AVAQYASDDGFSKTATD--DVDRCLRALEELDSLFLRASRKDSNATVVLMKSQLGTALTA 182
Query: 330 FPKLARDILDAIENNDIAKARALQEKLSLAIE 425
L L + + + K +A+ E A E
Sbjct: 183 LDSL----LQTVPSQVLDKGKAMVEVYRSASE 210
>At4g32640.1 68417.m04646 sec23/sec24 transport protein-related
Length = 1069
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/80 (21%), Positives = 34/80 (42%)
Frame = +3
Query: 189 TSNDLNEGAQVLRSLKEGQEMFLGADTLLAPAALLGIKSSIGTSFNLFPKLARDILDAIE 368
T+ N QVL L EG F+G T + +K ++ L +D+ +E
Sbjct: 523 TAAACNAIQQVLSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLE 582
Query: 369 NNDIAKARALQEKLSLAIEA 428
+ + + ++ L L +++
Sbjct: 583 TDVVVQLSECRQHLELLLDS 602
>At2g05990.2 68415.m00652 enoyl-[acyl-carrier protein] reductase
[NADH], chloroplast, putative / NADH-dependent enoyl-ACP
reductase, putative strong similarity to
enoyl-[acyl-carrier protein] reductase [NADH] SP:P80030
from [Brassica napus]
Length = 390
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 220 TWAPSLRSFEVNLRPLKFD 164
TW P+L FE +LR KFD
Sbjct: 127 TWVPALNIFETSLRRGKFD 145
>At2g05990.1 68415.m00651 enoyl-[acyl-carrier protein] reductase
[NADH], chloroplast, putative / NADH-dependent enoyl-ACP
reductase, putative strong similarity to
enoyl-[acyl-carrier protein] reductase [NADH] SP:P80030
from [Brassica napus]
Length = 390
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 220 TWAPSLRSFEVNLRPLKFD 164
TW P+L FE +LR KFD
Sbjct: 127 TWVPALNIFETSLRRGKFD 145
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -2
Query: 409 SFSCKALALAMSLFSIASSISRASLGNRLNEVPILDFMPRSAAGANSVSAPRNIS 245
SFS A + SS+ SLG VP +D M +S A+SV P+ IS
Sbjct: 938 SFSMDKRAATNPPVASESSLQMNSLGMGSLSVPWMDSMSKSFNLASSVPVPKLIS 992
>At3g44330.1 68416.m04763 expressed protein
Length = 565
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 271 SVSAPRNISWPSLRERKTWAPSLRS 197
SVS PR I+ P++ + W P LR+
Sbjct: 192 SVSEPRKIASPTITNIQGWLPGLRA 216
>At3g13590.1 68416.m01711 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 513
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = -1
Query: 152 SLFHKSRH-IYFHPA--HTGYVIVENW*FRCSISDQFYVGDQFSHC---CRFEIQL 3
SL K H I+ HP H + EN F CS+ +Q G + C C F+I +
Sbjct: 276 SLPRKMEHGIHIHPLTIHVDAMNNENGFFTCSVCNQHSCGFMYKCCQEDCEFKIDV 331
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,483,144
Number of Sequences: 28952
Number of extensions: 226523
Number of successful extensions: 680
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 987020800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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