Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_M11
         (526 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    22   3.3  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      22   3.3  
AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    21   7.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.7  

>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
           preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 225 VRPRTPPGNYILINNKFLVIP 287
           V PR PPG+  + N   +++P
Sbjct: 57  VPPRCPPGSKFIKNRCRVIVP 77


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 225 VRPRTPPGNYILINNKFLVIP 287
           V PR PPG+  + N   +++P
Sbjct: 57  VPPRCPPGSKFIKNRCRVIVP 77


>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 216 RSRLPLPEGFVRILIH 169
           ++R  LP GF ++L+H
Sbjct: 64  KTRHMLPTGFRKVLVH 79


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = -1

Query: 247 PGGVRGLTWPSQPAAAAGGFCSYSDPLQAGRT 152
           P G    + P   A  AGG C +     +G T
Sbjct: 516 PSGHHASSAPLLAATLAGGLCPHRRRANSGST 547


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,323
Number of Sequences: 438
Number of extensions: 2060
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)