Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_M10
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    44   8e-07
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    22   2.9  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   2.9  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   2.9  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   2.9  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   2.9  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   5.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   6.6  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   8.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 44.0 bits (99), Expect = 8e-07
 Identities = 28/122 (22%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
 Frame = +3

Query: 159 EIVSALEYLHARNIVYRDLKPENLLLAKDGHLKITDFGFAKKL-TDRTWTLCG----TPE 323
           ++   +E+L    +V+RDL   N+L+ ++  +K++DFG ++ +  D  +   G       
Sbjct: 600 QVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSRDVYQDNVYCKNGGGKLPVR 659

Query: 324 YLAPEIIQSKGHNKAVDWWALGVLIYEML-VGYPPFYDDNPLGIYEKILNG-RVEWPRHL 497
           ++A E +  + +    D W+ GVL++E++ +G  P+   +   + + + +G R+  P + 
Sbjct: 660 WMALESLTHQRYTTYSDVWSFGVLLWEIVTLGGTPYVGVHSSELLDFLKSGNRLARPANC 719

Query: 498 DP 503
            P
Sbjct: 720 SP 721


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +3

Query: 39  WTHDDSCIYMLFDYVCGGELFSYLRN 116
           WT+D + + ++ +   GG+L  ++ N
Sbjct: 149 WTYDGNQLDLVLNSESGGDLSDFITN 174


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +3

Query: 39  WTHDDSCIYMLFDYVCGGELFSYLRN 116
           WT+D + + ++ +   GG+L  ++ N
Sbjct: 149 WTYDGNQLDLVLNSESGGDLSDFITN 174


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +3

Query: 39  WTHDDSCIYMLFDYVCGGELFSYLRN 116
           WT+D + + ++ +   GG+L  ++ N
Sbjct: 149 WTYDGNQLDLVLNSESGGDLSDFITN 174


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +3

Query: 39  WTHDDSCIYMLFDYVCGGELFSYLRN 116
           WT+D + + ++ +   GG+L  ++ N
Sbjct: 149 WTYDGNQLDLVLNSESGGDLSDFITN 174


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +3

Query: 39  WTHDDSCIYMLFDYVCGGELFSYLRN 116
           WT+D + + ++ +   GG+L  ++ N
Sbjct: 149 WTYDGNQLDLVLNSESGGDLSDFITN 174


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 5/13 (38%), Positives = 12/13 (92%)
 Frame = +1

Query: 67  CFLITYVVGSCFL 105
           CFL++ ++G+C++
Sbjct: 48  CFLLSTILGTCWI 60


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 251 FENYRLRLREEVNGSYVDVVR 313
           F N R RLR+++  +   +VR
Sbjct: 268 FSNRRARLRKQITSAATPLVR 288


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 470 VENFLVNTQRVIIIKRWIS 414
           V NF  + Q +II K W++
Sbjct: 123 VLNFFGSIQFIIISKHWVT 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,908
Number of Sequences: 336
Number of extensions: 2874
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)