BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_M09
(560 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX538345-1|CAD98108.1| 1582|Homo sapiens hypothetical protein pr... 34 0.39
AK131549-1|BAD18683.1| 959|Homo sapiens protein ( Homo sapiens ... 32 1.6
Z69890-5|CAM26672.1| 325|Homo sapiens LUC7-like (S. cerevisiae)... 31 3.7
Z69890-4|CAM26671.1| 371|Homo sapiens LUC7-like (S. cerevisiae)... 31 3.7
Z69890-2|CAM26670.1| 272|Homo sapiens LUC7-like (S. cerevisiae)... 31 3.7
Z69890-1|CAM26669.1| 170|Homo sapiens LUC7-like (S. cerevisiae)... 31 3.7
X73882-1|CAA52086.1| 749|Homo sapiens microtubule associated pr... 31 3.7
DQ431198-12|ABD95913.1| 325|Homo sapiens putative RNA-binding p... 31 3.7
BC065198-1|AAH65198.1| 354|Homo sapiens LUC7L protein protein. 31 3.7
BC025777-1|AAH25777.1| 749|Homo sapiens MAP7 protein protein. 31 3.7
BC003194-1|AAH03194.1| 325|Homo sapiens LUC7-like (S. cerevisia... 31 3.7
AY005111-1|AAG22846.1| 371|Homo sapiens putative SR protein LUC... 31 3.7
AL024508-1|CAD92557.2| 749|Homo sapiens microtubule-associated ... 31 3.7
AL023284-2|CAI20475.1| 749|Homo sapiens microtubule-associated ... 31 3.7
AK223084-1|BAD96804.1| 371|Homo sapiens LUC7-like isoform b var... 31 3.7
AK001093-1|BAA91500.1| 325|Homo sapiens protein ( Homo sapiens ... 31 3.7
AJ404326-2|CAB93982.1| 371|Homo sapiens SR+89 protein. 31 3.7
AJ404326-1|CAB93981.1| 325|Homo sapiens SR+89 protein. 31 3.7
AJ242502-1|CAB88031.1| 712|Homo sapiens epithelial microtubule-... 31 3.7
AE006462-10|AAK61218.1| 325|Homo sapiens putative RNA binding p... 31 3.7
Y19205-1|CAC80724.1| 845|Homo sapiens SLITL1 protein. 30 4.8
BC113012-1|AAI13013.1| 845|Homo sapiens SLIT and NTRK-like fami... 30 4.8
BC113011-1|AAI13012.1| 845|Homo sapiens SLIT and NTRK-like fami... 30 4.8
AY358828-1|AAQ89187.1| 733|Homo sapiens LSGV9197 protein. 30 4.8
AL109653-2|CAC18888.1| 845|Homo sapiens SLIT and NTRK-like fami... 30 4.8
AL109653-1|CAI41645.1| 724|Homo sapiens SLIT and NTRK-like fami... 30 4.8
AK091015-1|BAC03566.1| 724|Homo sapiens protein ( Homo sapiens ... 30 4.8
AB058757-1|BAB47483.1| 572|Homo sapiens KIAA1854 protein protein. 30 4.8
X00145-1|CAA24980.1| 189|Homo sapiens protein ( Human mRNA for ... 30 6.4
M28586-1|AAA36041.1| 181|Homo sapiens protein ( Human leukocyte... 30 6.4
M12350-1|AAA52718.1| 189|Homo sapiens IFNA protein. 30 6.4
BC101640-1|AAI01641.1| 189|Homo sapiens interferon, alpha 21 pr... 30 6.4
BC101638-1|AAI01639.1| 189|Homo sapiens interferon, alpha 21 pr... 30 6.4
BC096699-1|AAH96699.1| 189|Homo sapiens interferon, alpha 21 pr... 30 6.4
BC069408-1|AAH69408.1| 189|Homo sapiens interferon, alpha 21 pr... 30 6.4
BC069372-1|AAH69372.1| 189|Homo sapiens interferon, alpha 21 pr... 30 6.4
BC069329-1|AAH69329.1| 189|Homo sapiens interferon, alpha 21 pr... 30 6.4
AL390882-1|CAH70157.1| 189|Homo sapiens interferon, alpha 21 pr... 30 6.4
BC015904-1|AAH15904.1| 261|Homo sapiens mitochondrial ribosomal... 29 8.5
>BX538345-1|CAD98108.1| 1582|Homo sapiens hypothetical protein
protein.
Length = 1582
Score = 33.9 bits (74), Expect = 0.39
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 302 QEDEQADRLRLPEDRHRHRRPSQRELEETQVPRQGPARARIGVPSVSG 445
Q EQ + + PE + RH + ++ELE+ Q P Q + + P+ +G
Sbjct: 525 QVPEQQRQGQAPEQQQRHNQVPEQELEQNQAPEQPEVQEQAAEPAQAG 572
>AK131549-1|BAD18683.1| 959|Homo sapiens protein ( Homo sapiens
cDNA FLJ16788 fis, clone PLACE7013963, weakly similar
to Mus musculus Nik related kinase (Nrk). ).
Length = 959
Score = 31.9 bits (69), Expect = 1.6
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 302 QEDEQADRLRLPEDRHRHRRPSQRELEETQVPRQGPARARIGVPS 436
Q EQ + + PE + RH + ++ELE+ Q P Q + + P+
Sbjct: 193 QVPEQQRQGQAPEQQQRHNQVPEQELEQNQAPEQPEVQEQAAEPA 237
>Z69890-5|CAM26672.1| 325|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 325
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +2
Query: 302 QEDEQADRLRLPEDRHRHRRPSQRELEETQVPRQGPARARIGVPSVSGLRCRSQLLAER 478
QE DRLR E+R R R S+R T+ R+ +R R S S R R +L R
Sbjct: 236 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSR 294
>Z69890-4|CAM26671.1| 371|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 371
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +2
Query: 302 QEDEQADRLRLPEDRHRHRRPSQRELEETQVPRQGPARARIGVPSVSGLRCRSQLLAER 478
QE DRLR E+R R R S+R T+ R+ +R R S S R R +L R
Sbjct: 236 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSR 294
>Z69890-2|CAM26670.1| 272|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 272
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +2
Query: 302 QEDEQADRLRLPEDRHRHRRPSQRELEETQVPRQGPARARIGVPSVSGLRCRSQLLAER 478
QE DRLR E+R R R S+R T+ R+ +R R S S R R +L R
Sbjct: 183 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSR 241
>Z69890-1|CAM26669.1| 170|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 170
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +2
Query: 302 QEDEQADRLRLPEDRHRHRRPSQRELEETQVPRQGPARARIGVPSVSGLRCRSQLLAER 478
QE DRLR E+R R R S+R T+ R+ +R R S S R R +L R
Sbjct: 35 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSR 93
>X73882-1|CAA52086.1| 749|Homo sapiens microtubule associated
protein protein.
Length = 749
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 311 EQADRLRLPEDRHRHRRPSQRELEETQVPRQ 403
E+ R RL ED+ RH +R +E +Q P+Q
Sbjct: 125 EEKRRQRLEEDKERHEAVVRRTMERSQKPKQ 155
>DQ431198-12|ABD95913.1| 325|Homo sapiens putative RNA-binding
protein Luc7-like 1 protein.
Length = 325
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +2
Query: 302 QEDEQADRLRLPEDRHRHRRPSQRELEETQVPRQGPARARIGVPSVSGLRCRSQLLAER 478
QE DRLR E+R R R S+R T+ R+ +R R S S R R +L R
Sbjct: 236 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSR 294
>BC065198-1|AAH65198.1| 354|Homo sapiens LUC7L protein protein.
Length = 354
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +2
Query: 302 QEDEQADRLRLPEDRHRHRRPSQRELEETQVPRQGPARARIGVPSVSGLRCRSQLLAER 478
QE DRLR E+R R R S+R T+ R+ +R R S S R R +L R
Sbjct: 219 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSR 277
>BC025777-1|AAH25777.1| 749|Homo sapiens MAP7 protein protein.
Length = 749
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 311 EQADRLRLPEDRHRHRRPSQRELEETQVPRQ 403
E+ R RL ED+ RH +R +E +Q P+Q
Sbjct: 125 EEKRRQRLEEDKERHEAVVRRTMERSQKPKQ 155
>BC003194-1|AAH03194.1| 325|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 325
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +2
Query: 302 QEDEQADRLRLPEDRHRHRRPSQRELEETQVPRQGPARARIGVPSVSGLRCRSQLLAER 478
QE DRLR E+R R R S+R T+ R+ +R R S S R R +L R
Sbjct: 236 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSR 294
>AY005111-1|AAG22846.1| 371|Homo sapiens putative SR protein LUC7B1
protein.
Length = 371
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +2
Query: 302 QEDEQADRLRLPEDRHRHRRPSQRELEETQVPRQGPARARIGVPSVSGLRCRSQLLAER 478
QE DRLR E+R R R S+R T+ R+ +R R S S R R +L R
Sbjct: 236 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSR 294
>AL024508-1|CAD92557.2| 749|Homo sapiens microtubule-associated
protein 7 protein.
Length = 749
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 311 EQADRLRLPEDRHRHRRPSQRELEETQVPRQ 403
E+ R RL ED+ RH +R +E +Q P+Q
Sbjct: 125 EEKRRQRLEEDKERHEAVVRRTMERSQKPKQ 155
>AL023284-2|CAI20475.1| 749|Homo sapiens microtubule-associated
protein 7 protein.
Length = 749
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 311 EQADRLRLPEDRHRHRRPSQRELEETQVPRQ 403
E+ R RL ED+ RH +R +E +Q P+Q
Sbjct: 125 EEKRRQRLEEDKERHEAVVRRTMERSQKPKQ 155
>AK223084-1|BAD96804.1| 371|Homo sapiens LUC7-like isoform b
variant protein.
Length = 371
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +2
Query: 302 QEDEQADRLRLPEDRHRHRRPSQRELEETQVPRQGPARARIGVPSVSGLRCRSQLLAER 478
QE DRLR E+R R R S+R T+ R+ +R R S S R R +L R
Sbjct: 236 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSR 294
>AK001093-1|BAA91500.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ10231 fis, clone HEMBB1000226, weakly similar to
PUTATIVE PRE-MRNA SPLICING FACTOR ATP-DEPENDENT RNA
HELICASE ).
Length = 325
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +2
Query: 302 QEDEQADRLRLPEDRHRHRRPSQRELEETQVPRQGPARARIGVPSVSGLRCRSQLLAER 478
QE DRLR E+R R R S+R T+ R+ +R R S S R R +L R
Sbjct: 236 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSR 294
>AJ404326-2|CAB93982.1| 371|Homo sapiens SR+89 protein.
Length = 371
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +2
Query: 302 QEDEQADRLRLPEDRHRHRRPSQRELEETQVPRQGPARARIGVPSVSGLRCRSQLLAER 478
QE DRLR E+R R R S+R T+ R+ +R R S S R R +L R
Sbjct: 236 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSR 294
>AJ404326-1|CAB93981.1| 325|Homo sapiens SR+89 protein.
Length = 325
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +2
Query: 302 QEDEQADRLRLPEDRHRHRRPSQRELEETQVPRQGPARARIGVPSVSGLRCRSQLLAER 478
QE DRLR E+R R R S+R T+ R+ +R R S S R R +L R
Sbjct: 236 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSR 294
>AJ242502-1|CAB88031.1| 712|Homo sapiens epithelial
microtubule-associated protein protein.
Length = 712
Score = 30.7 bits (66), Expect = 3.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 311 EQADRLRLPEDRHRHRRPSQRELEETQVPRQ 403
E+ R RL ED+ RH +R +E +Q P+Q
Sbjct: 125 EEKRRQRLEEDKERHEAVVRRTMERSQKPKQ 155
>AE006462-10|AAK61218.1| 325|Homo sapiens putative RNA binding
protein protein.
Length = 325
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +2
Query: 302 QEDEQADRLRLPEDRHRHRRPSQRELEETQVPRQGPARARIGVPSVSGLRCRSQLLAER 478
QE DRLR E+R R R S+R T+ R+ +R R S S R R +L R
Sbjct: 236 QEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSR 294
>Y19205-1|CAC80724.1| 845|Homo sapiens SLITL1 protein.
Length = 845
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 324 ACVCQKIGIDTGDRLNVNSKKRKFLVKGPLAPESEFPPFQDFDVVHNYLQS 476
+CVC D G LNVN ++RKF L P+ P + + NYLQ+
Sbjct: 343 SCVCTSQSSDNG--LNVNCQERKFTNISDLQPKPTSP--KKLYLTGNYLQT 389
>BC113012-1|AAI13013.1| 845|Homo sapiens SLIT and NTRK-like family,
member 2 protein.
Length = 845
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 324 ACVCQKIGIDTGDRLNVNSKKRKFLVKGPLAPESEFPPFQDFDVVHNYLQS 476
+CVC D G LNVN ++RKF L P+ P + + NYLQ+
Sbjct: 343 SCVCTSQSSDNG--LNVNCQERKFTNISDLQPKPTSP--KKLYLTGNYLQT 389
>BC113011-1|AAI13012.1| 845|Homo sapiens SLIT and NTRK-like family,
member 2 protein.
Length = 845
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 324 ACVCQKIGIDTGDRLNVNSKKRKFLVKGPLAPESEFPPFQDFDVVHNYLQS 476
+CVC D G LNVN ++RKF L P+ P + + NYLQ+
Sbjct: 343 SCVCTSQSSDNG--LNVNCQERKFTNISDLQPKPTSP--KKLYLTGNYLQT 389
>AY358828-1|AAQ89187.1| 733|Homo sapiens LSGV9197 protein.
Length = 733
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 324 ACVCQKIGIDTGDRLNVNSKKRKFLVKGPLAPESEFPPFQDFDVVHNYLQS 476
+CVC D G LNVN ++RKF L P+ P + + NYLQ+
Sbjct: 343 SCVCTSQSSDNG--LNVNCQERKFTNISDLQPKPTSP--KKLYLTGNYLQT 389
>AL109653-2|CAC18888.1| 845|Homo sapiens SLIT and NTRK-like family,
member 2 protein.
Length = 845
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 324 ACVCQKIGIDTGDRLNVNSKKRKFLVKGPLAPESEFPPFQDFDVVHNYLQS 476
+CVC D G LNVN ++RKF L P+ P + + NYLQ+
Sbjct: 343 SCVCTSQSSDNG--LNVNCQERKFTNISDLQPKPTSP--KKLYLTGNYLQT 389
>AL109653-1|CAI41645.1| 724|Homo sapiens SLIT and NTRK-like family,
member 2 protein.
Length = 724
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 324 ACVCQKIGIDTGDRLNVNSKKRKFLVKGPLAPESEFPPFQDFDVVHNYLQS 476
+CVC D G LNVN ++RKF L P+ P + + NYLQ+
Sbjct: 343 SCVCTSQSSDNG--LNVNCQERKFTNISDLQPKPTSP--KKLYLTGNYLQT 389
>AK091015-1|BAC03566.1| 724|Homo sapiens protein ( Homo sapiens
cDNA FLJ33696 fis, clone BRAWH2003964, weakly similar to
SLIT PROTEIN PRECURSOR. ).
Length = 724
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 324 ACVCQKIGIDTGDRLNVNSKKRKFLVKGPLAPESEFPPFQDFDVVHNYLQS 476
+CVC D G LNVN ++RKF L P+ P + + NYLQ+
Sbjct: 343 SCVCTSQSSDNG--LNVNCQERKFTNISDLQPKPTSP--KKLYLTGNYLQT 389
>AB058757-1|BAB47483.1| 572|Homo sapiens KIAA1854 protein protein.
Length = 572
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 324 ACVCQKIGIDTGDRLNVNSKKRKFLVKGPLAPESEFPPFQDFDVVHNYLQS 476
+CVC D G LNVN ++RKF L P+ P + + NYLQ+
Sbjct: 349 SCVCTSQSSDNG--LNVNCQERKFTNISDLQPKPTSP--KKLYLTGNYLQT 395
>X00145-1|CAA24980.1| 189|Homo sapiens protein ( Human mRNA for
interferon alpha-F. ).
Length = 189
Score = 29.9 bits (64), Expect = 6.4
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 288 SSDFDKKMNRLIACVCQKIGIDTGDRLNVNS 380
S++ ++++N L ACV Q++G++ +NV+S
Sbjct: 109 STELNQQLNDLEACVIQEVGVEETPLMNVDS 139
>M28586-1|AAA36041.1| 181|Homo sapiens protein ( Human leukocyte
interferon-alpha mRNA, complete cds, clone pIFN9. ).
Length = 181
Score = 29.9 bits (64), Expect = 6.4
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 288 SSDFDKKMNRLIACVCQKIGIDTGDRLNVNS 380
S++ ++++N L ACV Q++G++ +NV+S
Sbjct: 101 STELNQQLNDLEACVIQEVGVEETPLMNVDS 131
>M12350-1|AAA52718.1| 189|Homo sapiens IFNA protein.
Length = 189
Score = 29.9 bits (64), Expect = 6.4
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 288 SSDFDKKMNRLIACVCQKIGIDTGDRLNVNS 380
S++ ++++N L ACV Q++G++ +NV+S
Sbjct: 109 STELNQQLNDLEACVIQEVGVEETPLMNVDS 139
>BC101640-1|AAI01641.1| 189|Homo sapiens interferon, alpha 21
protein.
Length = 189
Score = 29.9 bits (64), Expect = 6.4
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 288 SSDFDKKMNRLIACVCQKIGIDTGDRLNVNS 380
S++ ++++N L ACV Q++G++ +NV+S
Sbjct: 109 STELNQQLNDLEACVIQEVGVEETPLMNVDS 139
>BC101638-1|AAI01639.1| 189|Homo sapiens interferon, alpha 21
protein.
Length = 189
Score = 29.9 bits (64), Expect = 6.4
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 288 SSDFDKKMNRLIACVCQKIGIDTGDRLNVNS 380
S++ ++++N L ACV Q++G++ +NV+S
Sbjct: 109 STELNQQLNDLEACVIQEVGVEETPLMNVDS 139
>BC096699-1|AAH96699.1| 189|Homo sapiens interferon, alpha 21
protein.
Length = 189
Score = 29.9 bits (64), Expect = 6.4
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 288 SSDFDKKMNRLIACVCQKIGIDTGDRLNVNS 380
S++ ++++N L ACV Q++G++ +NV+S
Sbjct: 109 STELNQQLNDLEACVIQEVGVEETPLMNVDS 139
>BC069408-1|AAH69408.1| 189|Homo sapiens interferon, alpha 21
protein.
Length = 189
Score = 29.9 bits (64), Expect = 6.4
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 288 SSDFDKKMNRLIACVCQKIGIDTGDRLNVNS 380
S++ ++++N L ACV Q++G++ +NV+S
Sbjct: 109 STELNQQLNDLEACVIQEVGVEETPLMNVDS 139
>BC069372-1|AAH69372.1| 189|Homo sapiens interferon, alpha 21
protein.
Length = 189
Score = 29.9 bits (64), Expect = 6.4
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 288 SSDFDKKMNRLIACVCQKIGIDTGDRLNVNS 380
S++ ++++N L ACV Q++G++ +NV+S
Sbjct: 109 STELNQQLNDLEACVIQEVGVEETPLMNVDS 139
>BC069329-1|AAH69329.1| 189|Homo sapiens interferon, alpha 21
protein.
Length = 189
Score = 29.9 bits (64), Expect = 6.4
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 288 SSDFDKKMNRLIACVCQKIGIDTGDRLNVNS 380
S++ ++++N L ACV Q++G++ +NV+S
Sbjct: 109 STELNQQLNDLEACVIQEVGVEETPLMNVDS 139
>AL390882-1|CAH70157.1| 189|Homo sapiens interferon, alpha 21
protein.
Length = 189
Score = 29.9 bits (64), Expect = 6.4
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 288 SSDFDKKMNRLIACVCQKIGIDTGDRLNVNS 380
S++ ++++N L ACV Q++G++ +NV+S
Sbjct: 109 STELNQQLNDLEACVIQEVGVEETPLMNVDS 139
>BC015904-1|AAH15904.1| 261|Homo sapiens mitochondrial ribosomal
protein L10 protein.
Length = 261
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 312 NRLIACVCQKIGIDTGDRLNVNSKKRKFLVKGPLAPESEFPPFQDFDVVHNYL 470
NR+IA VCQ + + D+L + + RK + + P PF + N L
Sbjct: 93 NRMIA-VCQNVALSAEDKLLMRHQLRKHKILMKIFPNQVLKPFLEDSKYQNLL 144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,581,637
Number of Sequences: 237096
Number of extensions: 1500383
Number of successful extensions: 8779
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 8632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8774
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -