Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_M09
         (560 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    25   0.40 
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    25   0.69 
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    23   1.6  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   3.7  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   6.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   6.4  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   8.5  

>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 285 NSSDFDKKMNRLIACVCQKIGIDTGDRLNV 374
           NS +  KK+    ACV QK+    G+ LNV
Sbjct: 44  NSEEQMKKLGCFEACVFQKLHFMDGNTLNV 73


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 285 NSSDFDKKMNRLIACVCQKIGIDTGDRLNV 374
           NS +  KK     ACV QK+    G+ LNV
Sbjct: 44  NSEEQMKKFGCFEACVFQKLHFMDGNTLNV 73


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 153 QPTPYARCDYICYHAIPRY 97
           Q  PY R ++ CY+++ R+
Sbjct: 6   QECPYCRRNFSCYYSLKRH 24


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 87  NNWNNVELRDNRYNH 131
           NN+NN    +N YN+
Sbjct: 99  NNYNNYNYNNNNYNN 113


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +3

Query: 21  DRGAMDASAFITKEKWETIMAANNWNNV 104
           D    D S+FIT  +W+ +      N +
Sbjct: 182 DEAGGDISSFITNGEWDLLGVPGKRNEI 209


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/27 (25%), Positives = 17/27 (62%)
 Frame = +3

Query: 93  WNNVELRDNRYNHIVHMVSAANGAEDF 173
           W N +L+ N +  I ++++ ++  E+F
Sbjct: 265 WKNWDLKYNTWEPISNLINCSDILEEF 291



 Score = 21.0 bits (42), Expect = 8.5
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -3

Query: 546 GCVCKTSDPSARAC 505
           GC CKT +   + C
Sbjct: 434 GCECKTCNSKTKCC 447


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 350 RHRRPSQRELEETQVPRQGPARARIGVPSV 439
           R+R P Q + +     R+G +  R+ +P +
Sbjct: 429 RYRGPKQNKPKVLHAIRRGASILRVSMPKI 458


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,065
Number of Sequences: 438
Number of extensions: 2606
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)