Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_M07
(707 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC042612-1|AAH42612.1| 628|Homo sapiens SORBS1 protein protein. 31 5.3
AL158165-8|CAI14385.1| 1004|Homo sapiens sorbin and SH3 domain c... 31 5.3
AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein. 31 5.3
AC074008-1|AAY24208.1| 2557|Homo sapiens unknown protein. 31 5.3
U61421-1|AAC51150.1| 500|Homo sapiens myosin VIIa protein. 30 9.3
U55209-1|AAC50722.1| 1203|Homo sapiens myosin VIIa protein. 30 9.3
U55208-1|AAC50927.1| 2175|Homo sapiens myosin VIIa protein. 30 9.3
U39226-1|AAB03679.1| 2215|Homo sapiens myosin VIIA protein. 30 9.3
U34227-1|AAC50218.1| 1075|Homo sapiens Myosin-VIIa protein. 30 9.3
AF136381-1|AAF22175.1| 1004|Homo sapiens c-Cbl-associated protei... 30 9.3
>BC042612-1|AAH42612.1| 628|Homo sapiens SORBS1 protein protein.
Length = 628
Score = 30.7 bits (66), Expect = 5.3
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +2
Query: 485 TPGKIPKGNQHRGQAKVEPRNWHKRQSQVATENALPNSLLRS---SQHPRLICIK--QLT 649
TP P Q Q + +P W S A NA P+SL S HP L K T
Sbjct: 50 TPSSSPASPQETRQHESKPDEWRLSSSADANGNAQPSSLAAKGYRSVHPNLPSDKSQDAT 109
Query: 650 VSSMADTRVV 679
SS A V+
Sbjct: 110 SSSAAQPEVI 119
>AL158165-8|CAI14385.1| 1004|Homo sapiens sorbin and SH3 domain
containing 1 protein.
Length = 1004
Score = 30.7 bits (66), Expect = 5.3
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +2
Query: 485 TPGKIPKGNQHRGQAKVEPRNWHKRQSQVATENALPNSLLRS---SQHPRLICIK--QLT 649
TP P Q Q + +P W S A NA P+SL S HP L K T
Sbjct: 82 TPSSSPASPQETRQHESKPDEWRLSSSADANGNAQPSSLAAKGYRSVHPNLPSDKSQDAT 141
Query: 650 VSSMADTRVV 679
SS A V+
Sbjct: 142 SSSAAQPEVI 151
>AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein.
Length = 4169
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 1 QESSFASVPV-YDISNVRPGTVALQSLPSPQLTADTSYQYQPLSIPAYNRFGXEILLTXT 177
+++ +VP+ Y +P ++ Q LP LT + + + P+SIPA + G I L+ +
Sbjct: 1930 RKTEIPTVPLSYYSRREKPSVISQQELPDSHLTEE-ALKVSPVSIPAEQKTGIPIGLSSS 1988
Query: 178 NSVS 189
S S
Sbjct: 1989 YSHS 1992
>AC074008-1|AAY24208.1| 2557|Homo sapiens unknown protein.
Length = 2557
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 1 QESSFASVPV-YDISNVRPGTVALQSLPSPQLTADTSYQYQPLSIPAYNRFGXEILLTXT 177
+++ +VP+ Y +P ++ Q LP LT + + + P+SIPA + G I L+ +
Sbjct: 1928 RKTEIPTVPLSYYSRREKPSVISQQELPDSHLTEE-ALKVSPVSIPAEQKTGIPIGLSSS 1986
Query: 178 NSVS 189
S S
Sbjct: 1987 YSHS 1990
>U61421-1|AAC51150.1| 500|Homo sapiens myosin VIIa protein.
Length = 500
Score = 29.9 bits (64), Expect = 9.3
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 432 AIWXLQSKTKNCVQLIFEHQGKFPKATNTAARPRLNRETGTNGN 563
A+ + +K N + LI E + KFPK T+T +LN + N N
Sbjct: 417 ALDMIANKPMNIISLIDE-ESKFPKGTDTTMLHKLNSQHKLNAN 459
>U55209-1|AAC50722.1| 1203|Homo sapiens myosin VIIa protein.
Length = 1203
Score = 29.9 bits (64), Expect = 9.3
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 432 AIWXLQSKTKNCVQLIFEHQGKFPKATNTAARPRLNRETGTNGN 563
A+ + +K N + LI E + KFPK T+T +LN + N N
Sbjct: 495 ALDMIANKPMNIISLIDE-ESKFPKGTDTTMLHKLNSQHKLNAN 537
>U55208-1|AAC50927.1| 2175|Homo sapiens myosin VIIa protein.
Length = 2175
Score = 29.9 bits (64), Expect = 9.3
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 432 AIWXLQSKTKNCVQLIFEHQGKFPKATNTAARPRLNRETGTNGN 563
A+ + +K N + LI E + KFPK T+T +LN + N N
Sbjct: 495 ALDMIANKPMNIISLIDE-ESKFPKGTDTTMLHKLNSQHKLNAN 537
>U39226-1|AAB03679.1| 2215|Homo sapiens myosin VIIA protein.
Length = 2215
Score = 29.9 bits (64), Expect = 9.3
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 432 AIWXLQSKTKNCVQLIFEHQGKFPKATNTAARPRLNRETGTNGN 563
A+ + +K N + LI E + KFPK T+T +LN + N N
Sbjct: 495 ALDMIANKPMNIISLIDE-ESKFPKGTDTTMLHKLNSQHKLNAN 537
>U34227-1|AAC50218.1| 1075|Homo sapiens Myosin-VIIa protein.
Length = 1075
Score = 29.9 bits (64), Expect = 9.3
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 432 AIWXLQSKTKNCVQLIFEHQGKFPKATNTAARPRLNRETGTNGN 563
A+ + +K N + LI E + KFPK T+T +LN + N N
Sbjct: 495 ALDMIANKPMNIISLIDE-ESKFPKGTDTTMLHKLNSQHKLNAN 537
>AF136381-1|AAF22175.1| 1004|Homo sapiens c-Cbl-associated protein
SH3P12 protein.
Length = 1004
Score = 29.9 bits (64), Expect = 9.3
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +2
Query: 485 TPGKIPKGNQHRGQAKVEPRNWHKRQSQVATENALPNSLL---RSSQHPRLICIK--QLT 649
TP P Q Q + +P W S A NA P+SL S HP L K T
Sbjct: 82 TPSSSPASPQETRQHESKPGEWKLSSSADANGNAQPSSLAVKGSRSVHPNLPSDKSQDAT 141
Query: 650 VSSMADTRVV 679
SS A V+
Sbjct: 142 SSSAAQPEVI 151
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,571,375
Number of Sequences: 237096
Number of extensions: 2473904
Number of successful extensions: 12788
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12788
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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