BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_M07
(707 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024224-1|ABC86286.1| 923|Drosophila melanogaster LP13067p pro... 29 6.2
AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA... 29 6.2
AE014297-1975|AAF55152.3| 1001|Drosophila melanogaster CG4285-PA... 29 8.2
>BT024224-1|ABC86286.1| 923|Drosophila melanogaster LP13067p
protein.
Length = 923
Score = 29.1 bits (62), Expect = 6.2
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 530 KVEPRNWHKRQSQVATENALPNSLLRSSQHPRLICIKQLTVSSM 661
+ E RNWH++ S+ NA +L+ + + R + I V+++
Sbjct: 116 EAERRNWHRKTSEKRRRNARKKNLMHTKEKKRRVRIILTVVTTV 159
>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
protein.
Length = 4498
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +2
Query: 548 WHKRQSQVATENALPNSLLRSSQHPRLICIKQLTVSSMADTRVVCCDKAKSRR 706
W + + +PNSL + R KQL S+ D + K +SRR
Sbjct: 1365 WRAVRRPASQRTVVPNSLAGDDKDSRRFAGKQLNTESIVDDELQTTTKFRSRR 1417
>AE014297-1975|AAF55152.3| 1001|Drosophila melanogaster CG4285-PA
protein.
Length = 1001
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 46 VRPGTVALQSLPSPQLTADTSYQYQPLSIPA 138
V G++ LQ++P P ++A+ SY+ L+I A
Sbjct: 234 VSSGSICLQAMPKPPVSAECSYKNCHLNISA 264
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,141,980
Number of Sequences: 53049
Number of extensions: 753124
Number of successful extensions: 2119
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2119
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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