Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_M07
         (707 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        27   0.17 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        27   0.17 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        27   0.17 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   3.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.7  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 72  LQSYGSWSNVGNIIYRDRCK 13
           L  +GSWSN  N++++D  K
Sbjct: 668 LHLFGSWSNRPNLLFKDEAK 687


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 72  LQSYGSWSNVGNIIYRDRCK 13
           L  +GSWSN  N++++D  K
Sbjct: 668 LHLFGSWSNRPNLLFKDEAK 687


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 72  LQSYGSWSNVGNIIYRDRCK 13
           L  +GSWSN  N++++D  K
Sbjct: 668 LHLFGSWSNRPNLLFKDEAK 687


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 545 FAVQPWPGRGVGCLWEFSLVF 483
           F V  W G    C+W+  +VF
Sbjct: 352 FVVNLWSGFCSQCIWQEKIVF 372


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 281 NGLISTPLTTPVV 319
           NG ++TPL TP V
Sbjct: 578 NGEVTTPLFTPAV 590


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,316
Number of Sequences: 438
Number of extensions: 5255
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)