Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_M07
         (707 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g58340.1 68414.m06636 MATE efflux protein-related contains Pf...    32   0.32 
At4g29140.1 68417.m04170 MATE efflux protein-related several hyp...    31   0.57 
At5g19700.1 68418.m02343 MATE efflux protein-related contains Pf...    30   1.3  
At4g23030.1 68417.m03321 MATE efflux protein-related contains Pf...    30   1.3  
At5g41160.1 68418.m05003 purine permease-related similar to puri...    29   3.0  
At2g38510.1 68415.m04732 MATE efflux protein-related contains Pf...    28   7.0  
At5g57810.1 68418.m07229 senescence-associated protein-related s...    27   9.2  
At1g55325.1 68414.m06320 expressed protein                             27   9.2  

>At1g58340.1 68414.m06636 MATE efflux protein-related contains Pfam
           profile: PF01554 uncharacterized membrane protein family
           UPF0013
          Length = 532

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 119 WYWYEVSAVNCGLGSDCRATVPGLTLEISYT 27
           W+WYE   + CGL ++ RATV  + + I  T
Sbjct: 298 WWWYEFMIILCGLLANPRATVASMGILIQTT 328


>At4g29140.1 68417.m04170 MATE efflux protein-related several
           hypothetical proteins - Arabidopsis thaliana; contains
           Pfam profile PF01554: Uncharacterized membrane protein
           family
          Length = 532

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 119 WYWYEVSAVNCGLGSDCRATVPGLTLEISYT 27
           W+WYE+  V CGL  + R+TV  + + I  T
Sbjct: 296 WWWYEIMIVLCGLLVNPRSTVAAMGVLIQTT 326


>At5g19700.1 68418.m02343 MATE efflux protein-related contains Pfam
           profile PF01554: Uncharacterized membrane protein family
          Length = 508

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -1

Query: 206 RPALEPDTELVXVRRISXPNLL*AGIDNGWYWYEVSAVNCGLGSDCRATVPGLTLEISYT 27
           RP+ E   +   V  ++ P+ +  G+   W+WYE+  V CGL  D    V  + + I  T
Sbjct: 249 RPSSECFKDWGPVVTLAIPSCI--GVCLEWWWYEIMTVLCGLLIDPSTPVASMGILIQTT 306


>At4g23030.1 68417.m03321 MATE efflux protein-related contains Pfam
           profile PF01554: Uncharacterized membrane protein family
          Length = 502

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 119 WYWYEVSAVNCGLGSDCRATVPGLTLEISYT 27
           W+WYE+  + CGL  + +ATV  + + I  T
Sbjct: 273 WWWYEIMILLCGLLLNPQATVASMGILIQTT 303


>At5g41160.1 68418.m05003 purine permease-related similar to purine
           permease [Arabidopsis thaliana] GI:7620007; contains
           Pfam profile PF03151: Domain of unknown function, DUF250
          Length = 358

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = -3

Query: 534 TLAWPRCWLPLGIFPGVQKSIVHSFSFCFEAXKWLFX**KFSTQRPLFSCFPGLLVLS 361
           T  +P  +LPL + P  Q S   S S  F+   W++    F+     F    GLL LS
Sbjct: 69  TGGFPILYLPLSLLPASQSSSSSSSSSSFKTLVWIYLSLGFAIGLDNFLYSVGLLYLS 126


>At2g38510.1 68415.m04732 MATE efflux protein-related contains Pfam
           profile PF01554: Uncharacterized membrane protein family
          Length = 486

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 119 WYWYEVSAVNCGLGSDCRATVPGLTLEISYTG 24
           ++WYE+    CGL  + +A+V  + + I  TG
Sbjct: 247 YWWYEIMLFLCGLLGNPKASVAAMGILIQTTG 278


>At5g57810.1 68418.m07229 senescence-associated protein-related
           similar to senescence-associated protein 5 [Hemerocallis
           hybrid cultivar] gi|3551954|gb|AAC34855
          Length = 317

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -3

Query: 588 NAFSVATCDCRLCQFRGSTLAWPRCWLPLGIF 493
           N +S+   DCR C+F G   +  R W  LGIF
Sbjct: 261 NDWSILCYDCRSCKF-GFIRSVRRKWWQLGIF 291


>At1g55325.1 68414.m06320 expressed protein
          Length = 1921

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -3

Query: 642 CFIQINLGCCELRSNELGNAFS 577
           C++++ LGCC+ R++    A S
Sbjct: 302 CYVEVTLGCCQNRNDNTSQANS 323


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,557,680
Number of Sequences: 28952
Number of extensions: 363470
Number of successful extensions: 916
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)