Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_M05
         (522 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024809-9|AAO12399.1|  700|Caenorhabditis elegans Hypothetical ...    31   0.66 
AC024809-8|AAF59546.2|  741|Caenorhabditis elegans Hypothetical ...    31   0.66 
Z73105-1|CAA97442.2|  525|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AY515708-1|AAR99658.1|  525|Caenorhabditis elegans bestrophin 1 ...    29   2.0  
AL021566-2|CAA16502.1|  283|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF025469-4|AAG00032.1|  270|Caenorhabditis elegans Hypothetical ...    28   3.5  
AF016678-7|AAB66154.3|  340|Caenorhabditis elegans Serpentine re...    28   3.5  
Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AC091125-3|AAK27885.1|  156|Caenorhabditis elegans Hypothetical ...    28   4.7  
U28739-15|AAK68188.1|  537|Caenorhabditis elegans Hypothetical p...    27   6.2  
U28739-14|AAM54207.1|  535|Caenorhabditis elegans Hypothetical p...    27   6.2  
AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    27   6.2  
AF038618-9|AAB92066.1|  304|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z92972-1|CAB07483.1|  283|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>AC024809-9|AAO12399.1|  700|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.2b protein.
          Length = 700

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 334 WKYHRCLHVSCSCPPNALCSPAL 402
           WK  +C H+   CPP  LC PAL
Sbjct: 281 WKCAKCAHMGTPCPPCVLC-PAL 302


>AC024809-8|AAF59546.2|  741|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.2a protein.
          Length = 741

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 334 WKYHRCLHVSCSCPPNALCSPAL 402
           WK  +C H+   CPP  LC PAL
Sbjct: 322 WKCAKCAHMGTPCPPCVLC-PAL 343


>Z73105-1|CAA97442.2|  525|Caenorhabditis elegans Hypothetical
           protein R13.3 protein.
          Length = 525

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 312 LTPNYHWVEVPQMSPCVVFVSSKRFMFTGTV 404
           L  NY WV +P   P VVF++ + + F   +
Sbjct: 226 LLSNYDWVPIPLAYPQVVFLAVRSYFFMALI 256


>AY515708-1|AAR99658.1|  525|Caenorhabditis elegans bestrophin 1
           protein.
          Length = 525

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 312 LTPNYHWVEVPQMSPCVVFVSSKRFMFTGTV 404
           L  NY WV +P   P VVF++ + + F   +
Sbjct: 226 LLSNYDWVPIPLAYPQVVFLAVRSYFFMALI 256


>AL021566-2|CAA16502.1|  283|Caenorhabditis elegans Hypothetical
           protein F08E10.2 protein.
          Length = 283

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 380 TLYVHRHCRSLILVSNIVRICLFTISKYAL 469
           TL V ++  SLILVS ++  C F I  Y+L
Sbjct: 172 TLSVEKYTDSLILVSLVILSCRFVIWNYSL 201


>AF025469-4|AAG00032.1|  270|Caenorhabditis elegans Hypothetical
           protein W09B6.5 protein.
          Length = 270

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -1

Query: 102 FTYTFRYRYYCCVFIYCILTFYRYSIETT 16
           F +TF YRY+CC F  C  T +R  IE T
Sbjct: 181 FIFTF-YRYWCCFF--C--TLFRVKIEKT 204


>AF016678-7|AAB66154.3|  340|Caenorhabditis elegans Serpentine
           receptor, class i protein45 protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 155 DVYIMSMRYIVGLYSFWFLPILLDIGIIVVYLFTVYLLFI 36
           D Y+    +I     FW++P L  IG+I + L    LL I
Sbjct: 11  DYYLNLKDHIDFSVPFWYIPYLTSIGLISLVLNNAVLLLI 50


>Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical
           protein C37A5.1 protein.
          Length = 512

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 321 NYHWVEVPQMSPCVVFVSSKRFMFT 395
           NY WV +P   P VVF + + + FT
Sbjct: 226 NYDWVPIPIAYPQVVFFAVRVYFFT 250


>AC091125-3|AAK27885.1|  156|Caenorhabditis elegans Hypothetical
           protein Y67D2.3 protein.
          Length = 156

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +1

Query: 169 GLTYHA*CAGLSKTPPLCPQTRLSPSTSTYLP 264
           G TYH    GLS T P C  T  +P  +   P
Sbjct: 55  GKTYHWCSCGLSITQPFCDGTHKTPGLTNVRP 86


>U28739-15|AAK68188.1|  537|Caenorhabditis elegans Hypothetical
           protein C17G10.9a protein.
          Length = 537

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 21/61 (34%), Positives = 32/61 (52%)
 Frame = -2

Query: 425 LKLESNSDSAGEHKAFGGHEHDTWRHLWYFHPVVVGSETVFFIFNRNYNQALKLGRYVDV 246
           LK + N DS  +   FG  + D +  L YF   ++G      +   +Y+QALK  +YVD+
Sbjct: 215 LKEKRNPDSVADE--FG--QSDLYFKLGYF--ALIGLLRTHVLLG-DYHQALKTVQYVDI 267

Query: 245 D 243
           D
Sbjct: 268 D 268


>U28739-14|AAM54207.1|  535|Caenorhabditis elegans Hypothetical
           protein C17G10.9b protein.
          Length = 535

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 21/61 (34%), Positives = 32/61 (52%)
 Frame = -2

Query: 425 LKLESNSDSAGEHKAFGGHEHDTWRHLWYFHPVVVGSETVFFIFNRNYNQALKLGRYVDV 246
           LK + N DS  +   FG  + D +  L YF   ++G      +   +Y+QALK  +YVD+
Sbjct: 213 LKEKRNPDSVADE--FG--QSDLYFKLGYF--ALIGLLRTHVLLG-DYHQALKTVQYVDI 265

Query: 245 D 243
           D
Sbjct: 266 D 266


>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +3

Query: 249 IDVSTKLQRLVVVSVENKEHRLTPNYHWVEVP 344
           + +S +   + V S + KEH+  P+ +W++ P
Sbjct: 598 MSISAEKSTVTVFSCDPKEHKTKPDIYWMDDP 629


>AF038618-9|AAB92066.1|  304|Caenorhabditis elegans Hypothetical
           protein F42G8.5 protein.
          Length = 304

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 203 LKHLHYVPKHVYPHQHRRIYQASTPGCS 286
           L++ H +   V PH  +++Y    PGCS
Sbjct: 183 LENRHAMSNVVKPHDEKKLYPPVIPGCS 210


>Z92972-1|CAB07483.1|  283|Caenorhabditis elegans Hypothetical
           protein T19C9.1 protein.
          Length = 283

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 380 TLYVHRHCRSLILVSNIVRICLFTISKYA 466
           TL V ++  SLILVS ++  C F I  Y+
Sbjct: 172 TLSVEKYTDSLILVSLVILSCRFVIWNYS 200


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,988,632
Number of Sequences: 27780
Number of extensions: 303378
Number of successful extensions: 1037
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)