Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_M05
(522 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g44100.1 68418.m05396 casein kinase, putative similar to dual... 29 1.9
At1g03930.1 68414.m00378 protein kinase (ADK1) identical to dual... 29 1.9
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 28 3.3
At4g28540.1 68417.m04083 casein kinase, putative similar to case... 28 4.4
At3g26510.4 68416.m03309 octicosapeptide/Phox/Bem1p (PB1) domain... 28 4.4
At3g26510.3 68416.m03306 octicosapeptide/Phox/Bem1p (PB1) domain... 28 4.4
At3g26510.2 68416.m03307 octicosapeptide/Phox/Bem1p (PB1) domain... 28 4.4
At3g26510.1 68416.m03308 octicosapeptide/Phox/Bem1p (PB1) domain... 28 4.4
At1g55320.1 68414.m06319 acyl-activating enzyme 18 (AAE18) nearl... 28 4.4
At4g26100.3 68417.m03758 casein kinase, putative similar to case... 27 5.8
At4g26100.1 68417.m03757 casein kinase, putative similar to case... 27 5.8
At3g23340.1 68416.m02944 casein kinase, putative similar to case... 27 7.7
At3g13560.3 68416.m01706 glycosyl hydrolase family 17 protein si... 27 7.7
At3g13560.2 68416.m01705 glycosyl hydrolase family 17 protein si... 27 7.7
At3g13560.1 68416.m01704 glycosyl hydrolase family 17 protein si... 27 7.7
>At5g44100.1 68418.m05396 casein kinase, putative similar to dual
specificity kinase 1 gi|1216484|gb|AAB47968
Length = 476
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1
Query: 337 KYHRCLHVSCSCPPNALCSPALSEFDSSFKYCPNL 441
KY R S P LC SEF S F YC +L
Sbjct: 224 KYDRISEKKVSTPIEVLCKNQPSEFVSYFHYCRSL 258
>At1g03930.1 68414.m00378 protein kinase (ADK1) identical to dual
specificity kinase 1 (ADK1) [Arabidopsis thaliana]
gi|1216484|gb|AAB47968; supported by cDNA gi:18700076
and gi:1216483. Note: differences between cDNAs in the
11th exon, possibly due to errors or alternative
splicing.
Length = 471
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 337 KYHRCLHVSCSCPPNALCSPALSEFDSSFKYCPNL 441
KY R + P LC SEF S F+YC +L
Sbjct: 224 KYDRISEKKVATPIEVLCKNQPSEFVSYFRYCRSL 258
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 28.3 bits (60), Expect = 3.3
Identities = 25/80 (31%), Positives = 33/80 (41%)
Frame = +1
Query: 25 YTIPIKSKYTVNKYTTIIPISKSIGKNQKLYKPTIYLIDII*TS*LL*GLTYHA*CAGLS 204
YT P S TV K T P++ + +YKPT L + T L Y S
Sbjct: 133 YTKPTLSP-TVYKPTLSPPVNNKPSLSPPVYKPT--LSPPVYTKPTLPPPVYKK-SPSYS 188
Query: 205 KTPPLCPQTRLSPSTSTYLP 264
PP P+ +P T Y+P
Sbjct: 189 PPPPFAPKPTYTPPTKPYVP 208
>At4g28540.1 68417.m04083 casein kinase, putative similar to casein
kinase I [Arabidopsis thaliana] gi|1103318|emb|CAA55395;
contains protein kinase domain, Pfam:PF00069
Length = 479
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 337 KYHRCLHVSCSCPPNALCSPALSEFDSSFKYCPNL 441
KY R S P LC EF S F+YC +L
Sbjct: 228 KYDRISEKKVSTPIEVLCKSYPPEFVSYFQYCRSL 262
>At3g26510.4 68416.m03309 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile
PF00564: PB1 domain
Length = 196
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 302 RTPSHSQLPLGGSTTDVSMCRVRVLQTLYVHRHCRSLILVSN 427
R+PS S+ PL S ++ YVHR+ R++ LV N
Sbjct: 150 RSPSLSKPPLPPSPPRITTVTKNPCYGCYVHRNSRNIYLVHN 191
>At3g26510.3 68416.m03306 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile
PF00564: PB1 domain
Length = 218
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 302 RTPSHSQLPLGGSTTDVSMCRVRVLQTLYVHRHCRSLILVSN 427
R+PS S+ PL S ++ YVHR+ R++ LV N
Sbjct: 172 RSPSLSKPPLPPSPPRITTVTKNPCYGCYVHRNSRNIYLVHN 213
>At3g26510.2 68416.m03307 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile
PF00564: PB1 domain
Length = 196
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 302 RTPSHSQLPLGGSTTDVSMCRVRVLQTLYVHRHCRSLILVSN 427
R+PS S+ PL S ++ YVHR+ R++ LV N
Sbjct: 150 RSPSLSKPPLPPSPPRITTVTKNPCYGCYVHRNSRNIYLVHN 191
>At3g26510.1 68416.m03308 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile
PF00564: PB1 domain
Length = 196
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 302 RTPSHSQLPLGGSTTDVSMCRVRVLQTLYVHRHCRSLILVSN 427
R+PS S+ PL S ++ YVHR+ R++ LV N
Sbjct: 150 RSPSLSKPPLPPSPPRITTVTKNPCYGCYVHRNSRNIYLVHN 191
>At1g55320.1 68414.m06319 acyl-activating enzyme 18 (AAE18) nearly
identical to acyl-activating enzyme 18 [Arabidopsis
thaliana] GI:29893268; similar to acetyl-CoA synthetase
[SP|P27095] from Methanothrix soehngenii; contains Pfam
AMP-binding enzyme domain PF00501l; identical to cDNA
acyl-activating enzyme 18 (At1g55320) GI: 29893267
Length = 725
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +1
Query: 193 AGLSKTPPLCPQTRLSPSTSTYLPSFNAWL*FLLKIKNTVSLPTTTGWKYHRCLHVSC 366
+G + P P T+LSP S + + W +++ +T PT GW L SC
Sbjct: 363 SGTTGEPKAIPWTQLSPIRS----ACDGWAHLDVQVGHTYCWPTNLGWVMGPTLMFSC 416
>At4g26100.3 68417.m03758 casein kinase, putative similar to casein
kinase I, delta isoform [Arabidopsis thaliana]
SWISS-PROT:P42158; contains protein kinase domain,
Pfam:PF00069
Length = 450
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1
Query: 337 KYHRCLHVSCSCPPNALCSPALSEFDSSFKYCPNL 441
KY R S ALC SEF S F YC +L
Sbjct: 224 KYERISEKKVSTSIEALCRGYPSEFASYFHYCRSL 258
>At4g26100.1 68417.m03757 casein kinase, putative similar to casein
kinase I, delta isoform [Arabidopsis thaliana]
SWISS-PROT:P42158; contains protein kinase domain,
Pfam:PF00069
Length = 450
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1
Query: 337 KYHRCLHVSCSCPPNALCSPALSEFDSSFKYCPNL 441
KY R S ALC SEF S F YC +L
Sbjct: 224 KYERISEKKVSTSIEALCRGYPSEFASYFHYCRSL 258
>At3g23340.1 68416.m02944 casein kinase, putative similar to casein
kinase I [Arabidopsis thaliana] gi|1197461|emb|CAA55396
Length = 442
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 337 KYHRCLHVSCSCPPNALCSPALSEFDSSFKYCPNL 441
KY + P LC SEF S F YC +L
Sbjct: 224 KYEKISEKKMLTPVEVLCKSYPSEFTSYFHYCRSL 258
>At3g13560.3 68416.m01706 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase GI:15150341 from [Camellia
sinensis]
Length = 505
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 241 PSTSTYLPSFNAWL*FLLK-IKNTVSLPTTTGWKYH 345
PSTST+ PS+N + LL+ +KNT S + Y+
Sbjct: 168 PSTSTFSPSWNTTVYQLLQFLKNTGSFFMLNAYPYY 203
>At3g13560.2 68416.m01705 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase GI:15150341 from [Camellia
sinensis]
Length = 505
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 241 PSTSTYLPSFNAWL*FLLK-IKNTVSLPTTTGWKYH 345
PSTST+ PS+N + LL+ +KNT S + Y+
Sbjct: 168 PSTSTFSPSWNTTVYQLLQFLKNTGSFFMLNAYPYY 203
>At3g13560.1 68416.m01704 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase GI:15150341 from [Camellia
sinensis]
Length = 505
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 241 PSTSTYLPSFNAWL*FLLK-IKNTVSLPTTTGWKYH 345
PSTST+ PS+N + LL+ +KNT S + Y+
Sbjct: 168 PSTSTFSPSWNTTVYQLLQFLKNTGSFFMLNAYPYY 203
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,960,183
Number of Sequences: 28952
Number of extensions: 267704
Number of successful extensions: 778
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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