Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_M04
(581 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0771 + 6453130-6454488 66 3e-11
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 65 4e-11
11_02_0011 - 7337618-7338496,7338596-7338991 62 2e-10
04_04_0620 + 26656072-26656417,26656585-26657396 62 4e-10
01_06_0824 - 32243495-32244319,32244449-32244859 61 5e-10
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 59 2e-09
11_02_0012 - 7346282-7347136,7347234-7347593 58 7e-09
04_04_0619 + 26652923-26653267,26653440-26654273 55 5e-08
11_01_0767 + 6438648-6438809,6439146-6440000 52 3e-07
05_06_0044 - 25150322-25151260 52 3e-07
11_01_0750 - 6315126-6315896,6316371-6316784 50 1e-06
01_01_1152 + 9170628-9171899 50 2e-06
04_04_0527 + 25962541-25962548,25965434-25965502,25965997-259660... 27 8.2
04_04_0236 + 23825368-23825763,23826229-23828667 27 8.2
01_06_0038 - 25819433-25820344 27 8.2
>11_01_0771 + 6453130-6454488
Length = 452
Score = 65.7 bits (153), Expect = 3e-11
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEK-GLIEDVFRLEPAGRDV---NLEMPKFEVKSGLDLK 411
+ M + LPD +GL ++E+ A + G + + PA V +PKF+V G +
Sbjct: 294 YAMAIFLPDARDGLRGLVERMASRPGFLHEHM---PAAWPVPVGEFRVPKFKVSCGGSVV 350
Query: 410 NLFPKLGVSKIFNEPATE----IVKSGS---VVVSEAFQEAFIKVDEEGATAGAFTGLIA 252
+LG+ F+ + + GS + V + +A I+V+EEG A A T
Sbjct: 351 GALEQLGLRLPFSPELADLSDMVEDDGSGWPLFVGDIQHKAVIEVNEEGTVAAAATMTRM 410
Query: 251 VPISSHYVPPPPMDFKVDHPFAYLIL--YKDIIIFAG 147
+P VPPPP+DF +HPFAY I+ ++FAG
Sbjct: 411 LPSG---VPPPPVDFVAEHPFAYFIVEEMSSAVVFAG 444
>03_05_0293 + 22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 64.9 bits (151), Expect = 4e-11
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 8/152 (5%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKA-AEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLF 402
F M ++LP+ +GL S+ EK +E +E+ + P ++PKF++ G L
Sbjct: 565 FSMYILLPEAQDGLWSLAEKLNSEPEFMENHIPMRPVHVG-QFKLPKFKISFGFGASGLL 623
Query: 401 PKLGVSKIFNEPAT--EIVKSG---SVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISS 237
LG+ +F E+V S ++ VS F ++FI+V+EEG A A AV +S
Sbjct: 624 KGLGLPLLFGSEVDLIEMVDSPGAQNLFVSSVFHKSFIEVNEEGTEATA-----AVMVSM 678
Query: 236 HYVPPPPMDFKVDHPFAYLIL--YKDIIIFAG 147
+ P ++F DHPF +LI +I+F G
Sbjct: 679 EHSRPRRLNFVADHPFMFLIREDVTGVILFIG 710
Score = 63.7 bits (148), Expect = 1e-10
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKA-AEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLF 402
F M ++LP+ +GL S+ EK +E +E ++PKF++ G + +L
Sbjct: 313 FSMYILLPEAQDGLWSLAEKLNSEPEFLEKHIPTRQVTVG-QFKLPKFKISFGFEASDLL 371
Query: 401 PKLGVSKIFNEPA--TEIVKSG---SVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISS 237
LG+ F+ A TE+V S ++ VS F ++F++V+EEG A A T + S+
Sbjct: 372 KSLGLHLPFSSEADLTEMVDSPEGKNLFVSSVFHKSFVEVNEEGTEAAAATAAVITLRSA 431
Query: 236 HYVPPPPMDFKVDHPFAYLIL--YKDIIIFAG 147
P DF DHPF +LI +++F G
Sbjct: 432 ----PIAEDFVADHPFLFLIQEDMTGVVLFVG 459
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 62.5 bits (145), Expect = 2e-10
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Frame = -1
Query: 572 MVVILPDKLEGLSSVLEKAAEKGLIEDVFR--LEPAGRDV-NLEMPKFEVKSGLDLKNLF 402
M + LPD+ +GL ++++K A R R+V +L +P+F+V + +
Sbjct: 264 MYIFLPDERDGLPALVDKMAASSSSSSFLRDHRPTRRREVGDLRVPRFKVSFYSQINGVL 323
Query: 401 PKLGVSKIFNEPATEIV--------KSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVP 246
+GV+ F+ ++ + G +VV E F A ++V+EEG A A T
Sbjct: 324 QGMGVTAAFDAGEADLSGMAEGVDQRGGGLVVEEVFHRAVVEVNEEGTEAAASTACTIRL 383
Query: 245 ISSHYVPPPPMDFKVDHPFAYLILYK--DIIIFAG 147
+S Y P DF DHPFA+ ++ + ++FAG
Sbjct: 384 LSMSY----PEDFVADHPFAFFVVEETSGAVLFAG 414
>04_04_0620 + 26656072-26656417,26656585-26657396
Length = 385
Score = 61.7 bits (143), Expect = 4e-10
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDV--NLEMPKFEVKSGLDLKNL 405
F M+V LP K +GL +L A + + V R P R + ++PKF+ S LD
Sbjct: 221 FCMLVFLPIKRDGLRHLLRMAVTEP--DFVTRCVPRSRQIVTPCKVPKFKFSSQLDAGGA 278
Query: 404 FPKLGVSKIFNEPATEIVKSG------SVVVSEAFQEAFIKVDEEGATA-GAFTGLIAVP 246
+LG+ F+ A ++ + + VS Q+ ++VDEEG TA A +
Sbjct: 279 LAQLGLGAPFDPDAADLSRMAVNTPPAGLYVSTMRQKCAVEVDEEGTTAVEAMYSPSSPG 338
Query: 245 ISSHYVPP--PPMDFKVDHPFAYLIL-YKDI-IIFAG 147
S Y PP PPM F +HPF + I+ YK ++F G
Sbjct: 339 YSPGYQPPRPPPMSFVAEHPFMFAIVEYKKAQVLFLG 375
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 61.3 bits (142), Expect = 5e-10
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEK--GLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNL 405
F M + LPD+ GL +L K LIE L +P+F + +
Sbjct: 247 FSMYIYLPDERHGLPDMLRKLCSDPAALIESSAALTEKVPVGAFMVPRFTLSYKTNAAET 306
Query: 404 FPKLGVSKIFNEPA---TEIVKSG----SVVVSEAFQEAFIKVDEEGATAGAFTGLI-AV 249
+LG+ F P +E+V+S +VVS + E+F++V+EEG A A T ++ +
Sbjct: 307 LRQLGLRLPFEYPGADLSEMVESSPEAEKIVVSAVYHESFVEVNEEGTEAAAATAVVMTL 366
Query: 248 PISSHYVPPPPMDFKVDHPFAYLIL--YKDIIIFAG 147
++ P +DF DHPF +LI +++FAG
Sbjct: 367 GCAAPSAPVHVVDFVADHPFMFLIKEDLTGVVVFAG 402
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 59.3 bits (137), Expect = 2e-09
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKA-AEKGLIEDVFRLEPAGRDVN-LEMPKFEVKSGLDLKNL 405
F M ++LP+ +GL S+ K +E +E R+ V ++PKF++ G + +L
Sbjct: 105 FSMYILLPEAQDGLWSLAAKLNSEPEFLEK--RIPTRQVTVGKFKLPKFKISFGFEASDL 162
Query: 404 FPKLGVSKIFNEPA--TEIVKSG---SVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPIS 240
LG+ F+ A T +V S ++ VS F ++F++VDEEG A A + +
Sbjct: 163 LKILGLQLPFSSKADLTGMVGSPERHNLFVSSLFHKSFVQVDEEGTEAAAASAAVV---- 218
Query: 239 SHYVPPPPMDFKVDHPFAYLIL--YKDIIIFAG 147
S P +DF DHPF +LI +++F G
Sbjct: 219 SFRSAPVTVDFVADHPFLFLIREDMTGVVLFIG 251
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 57.6 bits (133), Expect = 7e-09
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Frame = -1
Query: 572 MVVILPDKLEGLSSVLEK--AAEKGLIEDVFRLE--PAGRDV---NLEMPKFEVKSGLDL 414
M + LPD +GL ++++K A G F + P R + +L +P+F+V ++
Sbjct: 244 MYIFLPDARDGLPALVDKMAVASSGTASSSFLRDHRPGRRRIKVGDLRVPRFKVSFYSEM 303
Query: 413 KNLFPKLGVSKIFNEPATEI---VKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPI 243
+ +G+ F+ ++ + VVV + A ++V+EEG A A T +
Sbjct: 304 NEVLKGMGIGAAFDVGKVDLSGMIDGELVVVEKVMHRAVVEVNEEGTEAAAATACTMKFL 363
Query: 242 SSHYVPPPPMDFKVDHPFAYLILYK--DIIIFAG 147
P +DF DHPFA+ ++ + D ++FAG
Sbjct: 364 CLTLTSP--VDFVADHPFAFFVVEEKSDAVLFAG 395
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 54.8 bits (126), Expect = 5e-08
Identities = 51/158 (32%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAG-RDVNLEM-PKFEVKSGLDLKNL 405
F M+V LP K +GL +L A + + V R P ++V+ M PKF+ S LD +
Sbjct: 228 FCMLVFLPIKRDGLRHLLRMAVTEP--DFVMRCVPRSEQEVSPCMVPKFKFSSELDARGA 285
Query: 404 FPKLGVSKIFNEPATEIVKSGSVV--------VSEAFQEAFIKVDEEGATAGAFTGLIAV 249
KLG+ F+ A ++ + V VS Q+ ++VDEEG TA T
Sbjct: 286 LAKLGLGAPFDPLAADLSRMAVSVNTPPERLYVSAMRQKCAVEVDEEGTTAVEATYSCCS 345
Query: 248 PISS--HYVPPPPMDFKVDHPFAYLIL--YKDIIIFAG 147
P S P PM F +HPF + I+ K ++F G
Sbjct: 346 PTYSGPESPKPRPMSFVAEHPFMFAIVEYEKAQVLFLG 383
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 52.4 bits (120), Expect = 3e-07
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVN-LEMPKFEVK-SGLDLKNL 405
F M+V LPD +GL +L++ D L P V +PKF++ + ++
Sbjct: 169 FAMLVFLPDDRDGLPGLLDRITASPEFVDE-HLPPGCVPVGRFRVPKFKLAFCHYGIADV 227
Query: 404 FPKLGVSKIFNEPATEIV--------KSGSVVVSEAFQEAFIKVDEEGATAGAFT----- 264
LG+ F+ A E+ + ++ VS + ++V+EEG+ A A+T
Sbjct: 228 LRGLGLRLPFDMFAAEMSGIAVEGDGEDAAMFVSSVIHKVVVEVNEEGSEAAAYTEESDD 287
Query: 263 GLIAVPISSHYVPPPPM-DFKVDHPFAYLILYK--DIIIFAG 147
L Y PPP + DF DHPFA+ I+ + I+FAG
Sbjct: 288 DLGCSLYDDDYTPPPKLVDFVADHPFAFFIVEERSQAIVFAG 329
>05_06_0044 - 25150322-25151260
Length = 312
Score = 52.4 bits (120), Expect = 3e-07
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKG---LIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKN 408
F M + LPD +GL + K A L + +P L++PKFEV ++
Sbjct: 153 FAMYIYLPDDRDGLPELARKLASNPAAFLRRTIVPAQPVAVG-ELKIPKFEVSLKVEASR 211
Query: 407 LFPKLGVSKIFNEPATEIVKSGSVV-------VSEAFQEAFIKVDEEGATAGAFTGLIAV 249
L + G+ F PA + SG ++ VS + F+ V+EEG A A G +
Sbjct: 212 LLREFGLDLPFL-PAADNSFSGMLLDPPQGTAVSSLLHQCFVNVNEEGTVAAA--GTVGE 268
Query: 248 PISSHYVPPPPMDFKVDHPFAYLIL--YKDIIIFAG 147
+ +DF DHPF + I+ +++FAG
Sbjct: 269 IMGFAMPDDQIVDFVADHPFLFFIVEEVSGLVVFAG 304
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKA-AEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLF 402
F M + LPD +GL + +K +E +E E V + +P F++ +D+K+
Sbjct: 242 FSMYIFLPDDHDGLFELTQKIFSEPMFLEQHLPTEKC--HVGISVPNFKISFQIDVKDFL 299
Query: 401 PKLGVSKIFNEPA--TEIVK----SGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPIS 240
+G+ F A ++++K SG + +S+ +A ++VD++G + + + P+
Sbjct: 300 KDMGLELPFLREAEFSDMIKEDDSSGPLFLSDVLHKAVLEVDQKGIEETSVSMGLGKPL- 358
Query: 239 SHYVPPPPMDFKVDHPFAYLI 177
P FK DHPF ++I
Sbjct: 359 ------PAQHFKADHPFFFMI 373
>01_01_1152 + 9170628-9171899
Length = 423
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Frame = -1
Query: 455 LEMPKFEVKSGLDLKNLFPKLGVSKIF--NEPATEIVKSGSVVVSEAFQEAFIKVDEEGA 282
L +PKF+ + K+ KLGV++ F + + + + ++E + +A I+VDE G
Sbjct: 312 LMVPKFKFSFKFEAKSDMRKLGVTRAFAGGDFSGMVTGGDGLFIAEVYHQATIEVDELGT 371
Query: 281 TAGAFTGLIAVPISSHYVPPPPMDFKVDHPFAYLIL 174
A A T ++ + S PP+DF D PF + ++
Sbjct: 372 VAAASTAVVMMQKGSSL---PPVDFVADRPFLFAVV 404
>04_04_0527 +
25962541-25962548,25965434-25965502,25965997-25966073,
25966483-25966577
Length = 82
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -1
Query: 563 ILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAG 468
I+ +K G S ++K E+ +++DV L P+G
Sbjct: 5 IVDEKNHGFSKKVQKLQEQDILDDVVTLPPSG 36
>04_04_0236 + 23825368-23825763,23826229-23828667
Length = 944
Score = 27.5 bits (58), Expect = 8.2
Identities = 31/114 (27%), Positives = 47/114 (41%)
Frame = -1
Query: 557 PDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFPKLGVSKI 378
PD +E + SV+++A EK + R + D + K KS N G+S
Sbjct: 794 PDAMEYVLSVMKEAKEKVRKFEESRKDRRPGDSPVSTGKRNGKSSRP-SNEDGGNGISD- 851
Query: 377 FNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPPPP 216
+ PAT V + +V S Q V +A G+ VP+ H + PP
Sbjct: 852 -STPATTTVATVAVATSTTMQATPTMVAIAPTSATVPAGMFLVPMHPHPMVFPP 904
>01_06_0038 - 25819433-25820344
Length = 303
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -1
Query: 350 KSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPPPP 216
KS S S A ++ FIK +++ AF+ S +V PPP
Sbjct: 24 KSSSHGASNAGEDDFIKAEDDEEATMAFSSTCPSFHSEDFVSPPP 68
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,814,139
Number of Sequences: 37544
Number of extensions: 264801
Number of successful extensions: 873
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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