Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_M04
(581 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 78 5e-15
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 78 5e-15
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 71 5e-13
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 71 5e-13
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 70 1e-12
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 70 1e-12
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 70 1e-12
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 70 1e-12
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 69 2e-12
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 69 2e-12
U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein... 62 4e-10
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 55 4e-08
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 55 4e-08
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 50 2e-06
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 50 2e-06
Z92827-5|CAB07325.1| 732|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z68115-7|CAA92169.2| 302|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z50873-4|CAA90762.2| 302|Caenorhabditis elegans Hypothetical pr... 30 1.0
DQ645955-1|ABG36763.1| 302|Caenorhabditis elegans molting prote... 30 1.0
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr... 29 1.8
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 29 3.2
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 29 3.2
Z68014-3|CAA92025.2| 360|Caenorhabditis elegans Hypothetical pr... 27 7.4
L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with... 27 7.4
L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with... 27 7.4
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 77.8 bits (183), Expect = 5e-15
Identities = 47/144 (32%), Positives = 79/144 (54%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFP 399
++ V LP L L+K EK D+ + + +N ++PKF ++ L+LK+
Sbjct: 219 YQFSVFLPKLRNSLKEALKKLNEKRF-NDLLKTKKR-TFMNTQLPKFTIEKDLNLKSHLQ 276
Query: 398 KLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPPP 219
LG++ IF++ A + ++ +SE +A I+V+EEG TA A T + AVP+S+
Sbjct: 277 TLGITDIFSDSADLSGLAENLKISEGVHKAIIEVNEEGTTAAAVTMMKAVPMSARM--EQ 334
Query: 218 PMDFKVDHPFAYLILYKDIIIFAG 147
P++F DHPF + I + + IF G
Sbjct: 335 PVNFIADHPFFFTITFLNHPIFVG 358
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 77.8 bits (183), Expect = 5e-15
Identities = 47/144 (32%), Positives = 79/144 (54%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFP 399
++ V LP L L+K EK D+ + + +N ++PKF ++ L+LK+
Sbjct: 219 YQFSVFLPKLRNSLKEALKKLNEKRF-NDLLKTKKR-TFMNTQLPKFTIEKDLNLKSHLQ 276
Query: 398 KLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPPP 219
LG++ IF++ A + ++ +SE +A I+V+EEG TA A T + AVP+S+
Sbjct: 277 TLGITDIFSDSADLSGLAENLKISEGVHKAIIEVNEEGTTAAAVTMMKAVPMSARM--EQ 334
Query: 218 PMDFKVDHPFAYLILYKDIIIFAG 147
P++F DHPF + I + + IF G
Sbjct: 335 PVNFIADHPFFFTITFLNHPIFVG 358
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 71.3 bits (167), Expect = 5e-13
Identities = 43/144 (29%), Positives = 74/144 (51%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFP 399
F + + LP + GL LEK + I+++ + V++++PKF+++ LDLK
Sbjct: 217 FTLAIFLPKQRFGLVDALEKINGE-YIQNLLN-DLKSSYVSVQIPKFKIEKELDLKETLE 274
Query: 398 KLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPPP 219
+G+ +IF E A + V +S +A I+VDE+G TA A V + +
Sbjct: 275 AIGIKEIFAEGADLSGIADKVFISSGIHKAIIEVDEDGTTAAA-ASAFKVQLEM-MIMAE 332
Query: 218 PMDFKVDHPFAYLILYKDIIIFAG 147
P F DHPF + +L+++ +F G
Sbjct: 333 PTQFVADHPFLFAVLFENHTLFLG 356
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 71.3 bits (167), Expect = 5e-13
Identities = 43/144 (29%), Positives = 74/144 (51%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFP 399
F + + LP + GL LEK + I+++ + V++++PKF+++ LDLK
Sbjct: 217 FTLAIFLPKQRFGLVDALEKINGE-YIQNLLN-DLKSSYVSVQIPKFKIEKELDLKETLE 274
Query: 398 KLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPPP 219
+G+ +IF E A + V +S +A I+VDE+G TA A V + +
Sbjct: 275 AIGIKEIFAEGADLSGIADKVFISSGIHKAIIEVDEDGTTAAA-ASAFKVQLEM-MIMAE 332
Query: 218 PMDFKVDHPFAYLILYKDIIIFAG 147
P F DHPF + +L+++ +F G
Sbjct: 333 PTQFVADHPFLFAVLFENHTLFLG 356
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 70.1 bits (164), Expect = 1e-12
Identities = 43/138 (31%), Positives = 71/138 (51%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFP 399
F + + LP GL+ L K + I+ + + VN+++PK+++++ L L+
Sbjct: 222 FALTIFLPKTRFGLTESL-KTLDSATIQHLLS-NVSSTSVNVQIPKWKIETKLGLEEALQ 279
Query: 398 KLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPPP 219
LG+ K F+ A + + VS+ +A I+VDEEG A A T + S+ +V
Sbjct: 280 SLGIKKAFDNDADLGNMADGLYVSKVTHKALIEVDEEGTKAAAATTVSISLKSAMFVMEE 339
Query: 218 PMDFKVDHPFAYLILYKD 165
P DF DHPF + +L KD
Sbjct: 340 PKDFTADHPF-FFVLSKD 356
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 70.1 bits (164), Expect = 1e-12
Identities = 43/144 (29%), Positives = 74/144 (51%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFP 399
F + + LP GL+ L K + I+ + + VN+++PK+++++ L L+
Sbjct: 222 FALTIFLPKTRFGLTESL-KTLDSATIQHLLS-NVSSTSVNVQIPKWKIETKLGLEEALQ 279
Query: 398 KLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPPP 219
LG+ K F+ A + + VS+ +A I+VDEEG TA A T + V S+
Sbjct: 280 SLGIKKAFDNDADLGNMADGLYVSKVTHKALIEVDEEGTTAAAATVVSFVRKSARPSAIK 339
Query: 218 PMDFKVDHPFAYLILYKDIIIFAG 147
P+ F+ DHPF +++ + IF G
Sbjct: 340 PIVFQADHPFLFMLTQTNHPIFLG 363
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 70.1 bits (164), Expect = 1e-12
Identities = 43/144 (29%), Positives = 74/144 (51%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFP 399
F + + LP GL+ L K + I+ + + VN+++PK+++++ L L+
Sbjct: 222 FALTIFLPKTRFGLTESL-KTLDSATIQHLLS-NVSSTSVNVQIPKWKIETKLGLEEALQ 279
Query: 398 KLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPPP 219
LG+ K F+ A + + VS+ +A I+VDEEG TA A T + V S+
Sbjct: 280 SLGIKKAFDNDADLGNMADGLYVSKVTHKALIEVDEEGTTAAAATVVSFVRKSARPSAIK 339
Query: 218 PMDFKVDHPFAYLILYKDIIIFAG 147
P+ F+ DHPF +++ + IF G
Sbjct: 340 PIVFQADHPFLFMLTQTNHPIFLG 363
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 70.1 bits (164), Expect = 1e-12
Identities = 43/138 (31%), Positives = 71/138 (51%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFP 399
F + + LP GL+ L K + I+ + + VN+++PK+++++ L L+
Sbjct: 222 FALTIFLPKTRFGLTESL-KTLDSATIQHLLS-NVSSTSVNVQIPKWKIETKLGLEEALQ 279
Query: 398 KLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPPP 219
LG+ K F+ A + + VS+ +A I+VDEEG A A T + S+ +V
Sbjct: 280 SLGIKKAFDNDADLGNMADGLYVSKVTHKALIEVDEEGTKAAAATTVSISLKSAMFVMEE 339
Query: 218 PMDFKVDHPFAYLILYKD 165
P DF DHPF + +L KD
Sbjct: 340 PKDFTADHPF-FFVLSKD 356
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 69.3 bits (162), Expect = 2e-12
Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFP 399
F + + LP GLS L+ + I+ + + VN+ MPK+++++ L L
Sbjct: 231 FALSIFLPKTRFGLSEALQNL-DSVTIQQLMS-NTSNTLVNIAMPKWKIETALGLNRALM 288
Query: 398 KLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPPP 219
+G+ K F + A + + +S+A +A I+VDE+G A A T I+ ++S ++P
Sbjct: 289 AVGIEKAFTDSADLSNFADGIYISQAAHKALIEVDEDGTVAAAAT-TISFSLTSVFIPAE 347
Query: 218 -PMDFKVDHPFAYLILYKDIIIFAG 147
P++F DHPF +++ + +F G
Sbjct: 348 EPIEFTADHPFLFILSKDNHPLFIG 372
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 69.3 bits (162), Expect = 2e-12
Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFP 399
F + + LP GLS L+ + I+ + + VN+ MPK+++++ L L
Sbjct: 231 FALSIFLPKTRFGLSEALQNL-DSVTIQQLMS-NTSNTLVNIAMPKWKIETALGLNRALM 288
Query: 398 KLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPPP 219
+G+ K F + A + + +S+A +A I+VDE+G A A T I+ ++S ++P
Sbjct: 289 AVGIEKAFTDSADLSNFADGIYISQAAHKALIEVDEDGTVAAAAT-TISFSLTSVFIPAE 347
Query: 218 -PMDFKVDHPFAYLILYKDIIIFAG 147
P++F DHPF +++ + +F G
Sbjct: 348 EPIEFTADHPFLFILSKDNHPLFIG 372
>U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein 5
protein.
Length = 115
Score = 61.7 bits (143), Expect = 4e-10
Identities = 32/105 (30%), Positives = 57/105 (54%)
Frame = -1
Query: 461 VNLEMPKFEVKSGLDLKNLFPKLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGA 282
VN+ MPK+++++ L L +G+ K F + A + + +S+A +A I+VDE+G
Sbjct: 9 VNIAMPKWKIETALGLNRGLMAVGIEKAFTDSADLSNFADGIYISQAAHKALIEVDEDGT 68
Query: 281 TAGAFTGLIAVPISSHYVPPPPMDFKVDHPFAYLILYKDIIIFAG 147
A A T I+ + S P++F DHPF +++ + +F G
Sbjct: 69 VAAAAT-TISSSVGSVQRTEKPIEFTADHPFLFILSKDNHPLFIG 112
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 54.8 bits (126), Expect = 4e-08
Identities = 37/144 (25%), Positives = 68/144 (47%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFP 399
F + + LP GL+ L K + I+ + + VN+++PK+++++ L L+
Sbjct: 222 FALTIFLPKTRFGLTESL-KTLDSATIQHLLS-NVSSTSVNVQIPKWKIETKLGLEEALQ 279
Query: 398 KLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPPP 219
LG+ K F+ A + + VS+ +A I+VDE+G A A T
Sbjct: 280 SLGIKKAFDNDADLGNMADGLYVSKVTHKALIEVDEDGTVAVAATRCSIERCRKKM--KE 337
Query: 218 PMDFKVDHPFAYLILYKDIIIFAG 147
++F +HPF +++ + IF G
Sbjct: 338 NIEFHAEHPFFFILHHGTSYIFLG 361
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 54.8 bits (126), Expect = 4e-08
Identities = 37/144 (25%), Positives = 68/144 (47%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFP 399
F + + LP GL+ L K + I+ + + VN+++PK+++++ L L+
Sbjct: 222 FALTIFLPKTRFGLTESL-KTLDSATIQHLLS-NVSSTSVNVQIPKWKIETKLGLEEALQ 279
Query: 398 KLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPPP 219
LG+ K F+ A + + VS+ +A I+VDE+G A A T
Sbjct: 280 SLGIKKAFDNDADLGNMADGLYVSKVTHKALIEVDEDGTVAVAATRCSIERCRKKM--KE 337
Query: 218 PMDFKVDHPFAYLILYKDIIIFAG 147
++F +HPF +++ + IF G
Sbjct: 338 NIEFHAEHPFFFILHHGTSYIFLG 361
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/103 (29%), Positives = 51/103 (49%)
Frame = -1
Query: 455 LEMPKFEVKSGLDLKNLFPKLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATA 276
L PKF++ ++LK K G++++F E A + ++ A +A I+VD+ G A
Sbjct: 263 LTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGIGPGLQLASATHQALIEVDQVGTRA 322
Query: 275 GAFTGLIAVPISSHYVPPPPMDFKVDHPFAYLILYKDIIIFAG 147
A T S+ P+ +VDHPF + I+ + +F G
Sbjct: 323 AAATEAKIFFTSAS--SDEPLHIRVDHPFLFAIIKDNSPLFLG 363
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/103 (29%), Positives = 51/103 (49%)
Frame = -1
Query: 455 LEMPKFEVKSGLDLKNLFPKLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATA 276
L PKF++ ++LK K G++++F E A + ++ A +A I+VD+ G A
Sbjct: 263 LTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGIGPGLQLASATHQALIEVDQVGTRA 322
Query: 275 GAFTGLIAVPISSHYVPPPPMDFKVDHPFAYLILYKDIIIFAG 147
A T S+ P+ +VDHPF + I+ + +F G
Sbjct: 323 AAATEAKIFFTSAS--SDEPLHIRVDHPFLFAIIKDNSPLFLG 363
>Z92827-5|CAB07325.1| 732|Caenorhabditis elegans Hypothetical
protein C29F7.6 protein.
Length = 732
Score = 32.7 bits (71), Expect = 0.20
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 132 MQDFADKIINLKHTELCITSLCKE*TLFYTIIIKKKKKN 16
+ + D + L H E C CK LF T++IK+ +N
Sbjct: 681 ISNIEDASVELSHVERCQGKKCKRDVLFNTVVIKQNSRN 719
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -1
Query: 368 PATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPPP 219
P + KS V+++E E+ + V ++ +G ++P S ++PPP
Sbjct: 19 PTKTVDKSKPVIIAENEDESEVSVTKQAPPSGILPPGQSIPKPSFFIPPP 68
>Z68115-7|CAA92169.2| 302|Caenorhabditis elegans Hypothetical
protein F19H6.1 protein.
Length = 302
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 557 PDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLK 411
PDKL ++EK KG +VFR + D+++ + K +V +D K
Sbjct: 15 PDKLSLELFIIEKKIGKGQFSEVFRAQCTWVDLHVALKKIQVFEMVDQK 63
>Z50873-4|CAA90762.2| 302|Caenorhabditis elegans Hypothetical
protein F19H6.1 protein.
Length = 302
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 557 PDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLK 411
PDKL ++EK KG +VFR + D+++ + K +V +D K
Sbjct: 15 PDKLSLELFIIEKKIGKGQFSEVFRAQCTWVDLHVALKKIQVFEMVDQK 63
>DQ645955-1|ABG36763.1| 302|Caenorhabditis elegans molting protein
MLT-1 protein.
Length = 302
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 557 PDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLK 411
PDKL ++EK KG +VFR + D+++ + K +V +D K
Sbjct: 15 PDKLSLELFIIEKKIGKGQFSEVFRAQCTWVDLHVALKKIQVFEMVDQK 63
>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
protein T20F7.5 protein.
Length = 1065
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 296 DEEGATAGAFTGLIAVPISSHYVPPPPMDFKVDHPFAY 183
++ T G F +VP++S Y PPPP + V + F +
Sbjct: 68 NQNNNTFGRFYPQGSVPVASFYPPPPPRVYGVPNGFNF 105
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 6 protein.
Length = 1254
Score = 28.7 bits (61), Expect = 3.2
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +1
Query: 322 ASDTTTEPLLTISVAGSLNIFETPSFGNKFLR-SNPLFTSNFGISKFT--SLPAGSSLNT 492
AS TTTEP+ T + +L TP + P F + + + T +L S +N
Sbjct: 953 ASTTTTEPITTTEKSTTLE--TTPIEATTLNEVTGPAFVTGAPVDETTINTLELLSKINN 1010
Query: 493 SSMS-PFSAAFSKTDDKPSSLSGRMTTIRK 579
+ +S P SKTD S +SG + + K
Sbjct: 1011 TQISQPKPTDISKTDALSSLISGLIGSFTK 1040
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/82 (25%), Positives = 33/82 (40%)
Frame = +1
Query: 325 SDTTTEPLLTISVAGSLNIFETPSFGNKFLRSNPLFTSNFGISKFTSLPAGSSLNTSSMS 504
S +T EP+ L+ F FG + N T + + + TS P L S+
Sbjct: 3279 SPSTAEPVSPTKSGSKLSFFGLSPFGKVTPKKNTAQTQSLTVLESTSSP--ELLTPSNPE 3336
Query: 505 PFSAAFSKTDDKPSSLSGRMTT 570
+ A + + +P SLS T
Sbjct: 3337 TSNTASTSSSKQPKSLSEEKIT 3358
>Z68014-3|CAA92025.2| 360|Caenorhabditis elegans Hypothetical
protein W04G3.3 protein.
Length = 360
Score = 27.5 bits (58), Expect = 7.4
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = -1
Query: 500 IEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFPKLGVS----KIFNEPATEIVKSGSVV 333
I+ ++ P G D K VK G +++ KLG S K GS
Sbjct: 33 IDPTAKIGPPGTD-----DKALVKVGEVAESILDKLGFSTRDEKDIRRAPVPSSFFGSDD 87
Query: 332 VSEAFQEAFI-KVDEEGATAGAFTGLIAVPISSHYVPPPPMDFKV 201
V++ +EA +VD +G T+G GL +P+ P P D V
Sbjct: 88 VNQVIEEANANRVDLQGITSGQIPGLAPIPVPGF---PGPQDAPV 129
>L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
b protein.
Length = 926
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 443 KFEVKSGLDLKNLFPKLGVSKIFNEPATEIVKSGSVVVSEAFQ 315
+ EV+S + L + F KLG + P I G + ++EAF+
Sbjct: 174 RLEVESTIALSDAFIKLGTLEEIRLPQNGIRDDGIIALAEAFR 216
>L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
a protein.
Length = 960
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 443 KFEVKSGLDLKNLFPKLGVSKIFNEPATEIVKSGSVVVSEAFQ 315
+ EV+S + L + F KLG + P I G + ++EAF+
Sbjct: 211 RLEVESTIALSDAFIKLGTLEEIRLPQNGIRDDGIIALAEAFR 253
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,570,624
Number of Sequences: 27780
Number of extensions: 256790
Number of successful extensions: 892
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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