Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_M04
(581 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 60 8e-10
At1g64030.1 68414.m07252 serpin family protein / serine protease... 56 2e-08
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 54 5e-08
At2g14540.1 68415.m01628 serpin family protein / serine protease... 52 4e-07
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 48 3e-06
At1g62170.1 68414.m07013 serpin family protein / serine protease... 46 1e-05
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 45 3e-05
At1g64010.1 68414.m07250 serpin, putative / serine protease inhi... 45 4e-05
At2g35580.1 68415.m04357 serpin family protein / serine protease... 44 6e-05
At2g34680.1 68415.m04260 leucine-rich repeat family protein cont... 31 0.42
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 29 1.7
At1g31230.1 68414.m03822 bifunctional aspartate kinase/homoserin... 29 1.7
At5g04690.1 68418.m00477 expressed protein 28 4.0
At5g43100.1 68418.m05261 aspartyl protease family protein low si... 28 5.2
At1g68210.1 68414.m07792 two-component responsive regulator fami... 28 5.2
At4g00510.1 68417.m00070 cyclic nucleotide-binding domain-contai... 27 6.9
At1g18270.1 68414.m02280 ketose-bisphosphate aldolase class-II f... 27 6.9
At4g29840.2 68417.m04247 threonine synthase, chloroplast identic... 27 9.1
At4g29840.1 68417.m04248 threonine synthase, chloroplast identic... 27 9.1
At3g54250.1 68416.m05996 mevalonate diphosphate decarboxylase, p... 27 9.1
At3g22520.1 68416.m02846 expressed protein 27 9.1
At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 27 9.1
At1g72810.1 68414.m08417 threonine synthase, putative strong sim... 27 9.1
At1g59660.1 68414.m06710 nucleoporin family protein contains Pfa... 27 9.1
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 60.5 bits (140), Expect = 8e-10
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEK-AAEKGLIED-VFRLEPAGRDVNLEMPKFEVKSGLDLKNL 405
F M LPD GLS +L+K + G +++ + R + R+ ++PKF+ G D N+
Sbjct: 234 FSMYFYLPDANNGLSDLLDKIVSTPGFLDNHIPRRQVKVRE--FKIPKFKFSFGFDASNV 291
Query: 404 FPKLGVSKIFN--EPATEIVKS----GSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPI 243
LG++ F+ E TE+V+S ++ VS F +A I+V+EEG A A + + + +
Sbjct: 292 LKGLGLTSPFSGEEGLTEMVESPEMGKNLCVSNIFHKACIEVNEEGTEAAAASAGV-IKL 350
Query: 242 SSHYVPPPPMDFKVDHPFAYLIL--YKDIIIFAG 147
+ +DF DHPF ++ +++F G
Sbjct: 351 RGLLMEEDEIDFVADHPFLLVVTENITGVVLFIG 384
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 55.6 bits (128), Expect = 2e-08
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEK-AAEKGLIEDVFRLEPAGRDV--NLEMPKFEVKSGLDLKN 408
F M LPDK +GL +LEK A+ G ++ P RD +PKF+++ G + +
Sbjct: 237 FSMYFYLPDKKDGLDDLLEKMASTPGFLDSHI---PTYRDELEKFRIPKFKIEFGFSVTS 293
Query: 407 LFPKLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYV 228
+ +LG+ + + +A +++DEEGA A A T S +V
Sbjct: 294 VLDRLGLRSM-----------------SMYHKACVEIDEEGAEAAAATADGDCGCSLDFV 336
Query: 227 PPPP-MDFKVDHPFAYLI 177
PP +DF DHPF +LI
Sbjct: 337 EPPKKIDFVADHPFLFLI 354
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 54.4 bits (125), Expect = 5e-08
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEK-AAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLF 402
F M + LP+ +GL+++LEK + E G ++ L D L +PK +
Sbjct: 234 FSMYIYLPNDKDGLAALLEKISTEPGFLDSHIPLHRTPVDA-LRIPKLNFSFEFKASEVL 292
Query: 401 PKLGVSKIFNEPA--TEIVKSGS----VVVSEAFQEAFIKVDEEGATAGAFTGLIAVPIS 240
+G++ F TE+V S S + VS +A I+VDEEG A A + I +P
Sbjct: 293 KDMGLTSPFTSKGNLTEMVDSPSNGDKLHVSSIIHKACIEVDEEGTEAAAVSVAIMMPQC 352
Query: 239 SHYVPPPPMDFKVDHPFAYLILYKD--IIIFAG 147
P DF DHPF + + + +I+F G
Sbjct: 353 LMRNP----DFVADHPFLFTVREDNSGVILFIG 381
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 51.6 bits (118), Expect = 4e-07
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Frame = -1
Query: 581 DFRMVVILPDKLEGLSSVLEK-AAEKGLIEDVFRLEPAGRDV-NLEMPKFEVKSGLDLKN 408
+F M + LPDK L ++LE+ + G ++ + DV + +PKF+++ G +
Sbjct: 264 EFSMYLYLPDKKGELDNLLERITSNPGFLDS--HIPEYRVDVGDFRIPKFKIEFGFE--- 318
Query: 407 LFPKLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYV 228
S +FN+ + Q+A I++DEEG A A T ++ V S +
Sbjct: 319 ------ASSVFNDFELNV---------SLHQKALIEIDEEGTEAAAATTVVVVTGSCLWE 363
Query: 227 PPPPMDFKVDHPFAYLI 177
P +DF DHPF +LI
Sbjct: 364 PKKKIDFVADHPFLFLI 380
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 48.4 bits (110), Expect = 3e-06
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEK-AAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLF 402
F M + LP+ EGL+ +LEK +E ++ L +PKF+ + +
Sbjct: 169 FSMYIYLPNDKEGLAPLLEKIGSEPSFFDNHIPLHCISVGA-FRIPKFKFSFEFNASEVL 227
Query: 401 PKLGVSKIFNEPA--TEIVKSGS----VVVSEAFQEAFIKVDEEGATAGAFTGLIAVPIS 240
+G++ FN TE+V S S + VS +A I+VDEEG A A + + V
Sbjct: 228 KDMGLTSPFNNGGGLTEMVDSPSNGDDLYVSSILHKACIEVDEEGTEAAAVS--VGVVSC 285
Query: 239 SHYVPPPPMDFKVDHPFAYLIL--YKDIIIFAG 147
+ + P DF D PF + + +I+F G
Sbjct: 286 TSFRRNP--DFVADRPFLFTVREDKSGVILFMG 316
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 46.4 bits (105), Expect = 1e-05
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 2/147 (1%)
Frame = -1
Query: 581 DFRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLF 402
+F M + LPDK L +LE+ D E + +PKF+++ G + + F
Sbjct: 300 NFAMYIYLPDKKGELDDLLERMTSTPGFLDSHNPERRVKVGKFRIPKFKIEFGFEASSAF 359
Query: 401 PKLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPP 222
+ F +Q+ I++DE+G A FT + + V P
Sbjct: 360 SDFELDVSF------------------YQKTLIEIDEKGTEAVTFTAFRSAYLGCALVKP 401
Query: 221 PPMDFKVDHPFAYLILYKD--IIIFAG 147
+DF DHPF +LI + ++FAG
Sbjct: 402 --IDFVADHPFLFLIREEQTGTVLFAG 426
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 45.2 bits (102), Expect = 3e-05
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFP 399
F M + LP+ +GL ++LE+ + K D ++PKF+ ++
Sbjct: 234 FAMYIYLPNDRDGLPTLLEEISSKPRFLDNHIPRQRILTEAFKIPKFKFSFEFKASDVLK 293
Query: 398 KLGVSKIFNEPA-TEIVKSGSV----------VVSEAFQEAFIKVDEEGATAGAFTGLIA 252
++G++ F + TE+V+S S+ VS F +A I+VDEEG A A
Sbjct: 294 EMGLTLPFTHGSLTEMVESPSIPENLCVAENLFVSNVFHKACIEVDEEGTEAA------A 347
Query: 251 VPISSHYVPPPPM-DFKVDHPFAYLILYK--DIIIFAG 147
V ++S M DF DHPF + + + +I+F G
Sbjct: 348 VSVASMTKDMLLMGDFVADHPFLFTVREEKSGVILFMG 385
>At1g64010.1 68414.m07250 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 185
Score = 44.8 bits (101), Expect = 4e-05
Identities = 36/135 (26%), Positives = 62/135 (45%)
Frame = -1
Query: 581 DFRMVVILPDKLEGLSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLF 402
+F M LPD+ +GL +++EK A D + +PKF+++ G F
Sbjct: 50 NFSMHFYLPDEKDGLDNLVEKMASSVGFLDSHIPSQKVKVGEFGIPKFKIEFGFSASRAF 109
Query: 401 PKLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPP 222
+LG+ ++ +Q+A +++DEEGA A A T ++ +V
Sbjct: 110 NRLGLDEM-----------------ALYQKACVEIDEEGAEAIAATAVVG-GFGCAFV-- 149
Query: 221 PPMDFKVDHPFAYLI 177
+DF DHPF ++I
Sbjct: 150 KRIDFVADHPFLFMI 164
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 44.4 bits (100), Expect = 6e-05
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 4/148 (2%)
Frame = -1
Query: 578 FRMVVILPDKLEGLSSVLEK-AAEKGLIEDVFRLEPAGRDV-NLEMPKFEVKSGLDLKNL 405
F M + LPD+ +GL S+LE+ A+ +G ++D L + L++P+F+ +
Sbjct: 236 FSMQIYLPDEKDGLPSMLERLASTRGFLKDNEVLPSHSAVIKELKIPRFKFDFAFEASEA 295
Query: 404 FPKLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVP 225
G+ P + I+ + V E V + A A AF G I P
Sbjct: 296 LKGFGLV----VPLSMIMHKSCIEVDE--------VGSKAAAAAAFRG-----IGCRRPP 338
Query: 224 PPPMDFKVDHPFAYLIL-YKD-IIIFAG 147
P DF DHPF +++ Y+ +++F G
Sbjct: 339 PEKHDFVADHPFLFIVKEYRSGLVLFLG 366
>At2g34680.1 68415.m04260 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; identical to cDNA hypothetical protein
(AIR9) mRNA, partial cds GI:3695020
Length = 1661
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +1
Query: 415 RSNPLFTSNFGISKFTSLPAGSSLNTSSMSPFSAAFSKTDDKPSSLSGRMTT 570
R + TS +SK +S AGSS + SS S S +FS D+ S+ SGR T
Sbjct: 197 RLHSTLTSGRTVSKVSSPSAGSSPSVSS-SIRSKSFSSPLDRTSNFSGRKKT 247
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -1
Query: 506 GLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFP--KLGVSKIFNEPATEIVKSGSVV 333
G+ D F +P + + KFE ++ D+K +FP K V KI EIV + +
Sbjct: 405 GIYTDDFPNQPP---LKFDYTKFEQRTNNDMKMMFPERKTSVKKIRFNSTVEIVLQNTAI 461
Query: 332 VS 327
+S
Sbjct: 462 IS 463
>At1g31230.1 68414.m03822 bifunctional aspartate kinase/homoserine
dehydrogenase / AK-HSDH nearly identical to gb|X71364
[PIR|S46497] aspartate kinase / homoserine dehydrogenase
from Arabidopsis thaliana; contains ACT domain
Length = 911
Score = 29.5 bits (63), Expect = 1.7
Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 2/130 (1%)
Frame = -1
Query: 536 SSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFPKLGVSKIFNEPATE 357
S V+ +A + G E R + +G DV ++ +SGL L L V + +P
Sbjct: 743 SEVVAEAKQAGFTEPDPRDDLSGTDVARKVTILARESGLKLD--LEGLPVQNLVPKPLQA 800
Query: 356 IVKSGSVVVS-EAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVPPPPMD-FKVDHPFAY 183
+ + F E K EE AG + V + + +K DHPFA
Sbjct: 801 CASAEEFMEKLPQFDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDHPFAQ 860
Query: 182 LILYKDIIIF 153
L +II F
Sbjct: 861 LSGADNIIAF 870
>At5g04690.1 68418.m00477 expressed protein
Length = 625
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -1
Query: 413 KNLFPKLGVSKIFNEPATEIVKSGSVVVSEAFQEAFIKVDEEGATAGAFTGLIAV 249
+ + PK+ + +N P T + SG++ ++EA K+ E G ++AV
Sbjct: 135 EQMLPKMSQNNFYNTPLTVVAVSGNMEIAEALVAKNPKLLEIPGNNGEIPVVVAV 189
>At5g43100.1 68418.m05261 aspartyl protease family protein low
similarity to CND41, chloroplast nucleoid DNA binding
protein [Nicotiana tabacum] GI:2541876; contains Pfam
profile PF00026: Eukaryotic aspartyl protease
Length = 631
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 542 GLSSVLEKAAEKGLIEDVFRLEPAGRDV 459
G SV+++ +KG+IEDVF L G +V
Sbjct: 204 GKLSVVDQLVDKGVIEDVFSLCYGGMEV 231
>At1g68210.1 68414.m07792 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
Length = 663
Score = 27.9 bits (59), Expect = 5.2
Identities = 24/98 (24%), Positives = 41/98 (41%)
Frame = -1
Query: 518 AAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNLFPKLGVSKIFNEPATEIVKSGS 339
AA L E+V +P G MPKF + LDL N + N+ + + S
Sbjct: 237 AAISILGEEVLFKKPIGEKEET-MPKFHIGGKLDLSNHSVH---GNVLNKLSMNVNFVPS 292
Query: 338 VVVSEAFQEAFIKVDEEGATAGAFTGLIAVPISSHYVP 225
+ + + +D + ++TGL++ +SS P
Sbjct: 293 TISNNPAYN-ILSIDSSSIDSSSYTGLVSTGLSSENSP 329
>At4g00510.1 68417.m00070 cyclic nucleotide-binding
domain-containing protein contains Pfam profile: PF00027
cyclic nucleotide-binding domain
Length = 175
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -1
Query: 539 LSSVLEKAAEKGLIEDVFRLEPAGRDVNLEMPKFEVKSGLDLKNL 405
+ SV + E+ L+ED+ LEP V+ P F S L +K L
Sbjct: 118 IKSVSDSDKERCLVEDILYLEPLDVRVSPNCPSFSSISVLMIKVL 162
>At1g18270.1 68414.m02280 ketose-bisphosphate aldolase class-II family
protein low similarity to KbaY (tagatose-1,6-bisphosphate
aldolase) [Escherichia coli] GI:8895753; contains Pfam
profile PF01116: Fructose-bisphosphate aldolase class-II
Length = 1373
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 359 EIVKSGSVVVSEAFQEAFIKVDEEGATAGAF 267
E+VKS SVV + +E + ++ G GAF
Sbjct: 1085 EVVKSWSVVAGRSTKELLLNAEKGGYAVGAF 1115
>At4g29840.2 68417.m04247 threonine synthase, chloroplast identical
to SP|Q9S7B5 Threonine synthase, chloroplast precursor
(EC 4.2.3.1) (TS) {Arabidopsis thaliana}
Length = 535
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 367 GSLNIFETPSFGNKFLRSNPLFTSNFGIS 453
G+ N+F FG +FL N L+ + GIS
Sbjct: 169 GNSNLFWAERFGKQFLGMNDLWVKHCGIS 197
>At4g29840.1 68417.m04248 threonine synthase, chloroplast identical
to SP|Q9S7B5 Threonine synthase, chloroplast precursor
(EC 4.2.3.1) (TS) {Arabidopsis thaliana}
Length = 526
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 367 GSLNIFETPSFGNKFLRSNPLFTSNFGIS 453
G+ N+F FG +FL N L+ + GIS
Sbjct: 169 GNSNLFWAERFGKQFLGMNDLWVKHCGIS 197
>At3g54250.1 68416.m05996 mevalonate diphosphate decarboxylase,
putative similar to mevalonate diphosphate decarboxylase
[Arabidopsis thaliana] gi|2288887|emb|CAA74700
Length = 419
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 378 IQRASDRDRQEWLCGSVRSISGSIYQS 298
+ A DRDR WL G S+SGS YQ+
Sbjct: 56 VSPAFDRDRM-WLNGKEISLSGSRYQN 81
>At3g22520.1 68416.m02846 expressed protein
Length = 600
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 451 SKFTSLPAGSS--LNTSSMSPFSAAFSKTDDKPSSLSGRMTTIRK 579
+K S P GSS + +P + S T KPS SGR T+I++
Sbjct: 254 AKPKSTPRGSSNKKKKGATTPATGPQSSTKPKPSRQSGRRTSIQQ 298
>At3g04960.1 68416.m00538 expressed protein low similarity to
SP|P32380 NUF1 protein (Spindle poly body spacer protein
SPC110) {Saccharomyces cerevisiae}
Length = 556
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -1
Query: 551 KLEGLSSVLEKAAEKGLIE 495
++EG +SV E+AA+ GL+E
Sbjct: 477 RVEGFTSVYERAAQNGLVE 495
>At1g72810.1 68414.m08417 threonine synthase, putative strong
similarity to SP|Q9S7B5 Threonine synthase, chloroplast
precursor (EC 4.2.3.1) (TS) {Arabidopsis thaliana}
Length = 516
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 367 GSLNIFETPSFGNKFLRSNPLFTSNFGIS 453
G+ N+F FG ++L+ N L+ + GIS
Sbjct: 160 GNSNLFWAERFGKQYLQMNDLWVKHCGIS 188
>At1g59660.1 68414.m06710 nucleoporin family protein contains Pfam
profiles: PF04096 nucleoporin autopeptidase, PF03093
nucleoporin FG repeat family
Length = 997
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 325 SDTTTEPLLTISVAGSLNIFETPSFGNKFLRSNPLFTSNFGISKFTSLPAGSSL 486
S+T P + S TPSF + + +F S+ ++ TS P GSS+
Sbjct: 435 SNTNFSPSFSQPTTPSFGQPTTPSFRSTVSNTTSVFGSSSSLTTNTSQPLGSSI 488
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,642,682
Number of Sequences: 28952
Number of extensions: 231006
Number of successful extensions: 762
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1141585696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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