Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_M03
         (503 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    32   0.003
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    28   0.055
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    28   0.055
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    25   0.51 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   2.7  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   8.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.3  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 31.9 bits (69), Expect = 0.003
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 356 CVSADLMCDGVDHCADGSDEDT 421
           C+   L C+G   C+DGSDE+T
Sbjct: 129 CIERGLFCNGEKDCSDGSDENT 150


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 27.9 bits (59), Expect = 0.055
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 356 CVSADLMCDGVDHCADGSDEDTAAL 430
           C+  +L C+G   C D SDE++  +
Sbjct: 121 CIDKELFCNGKPDCKDESDENSCTV 145


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 27.9 bits (59), Expect = 0.055
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 356 CVSADLMCDGVDHCADGSDEDTAAL 430
           C+  +L C+G   C D SDE++  +
Sbjct: 128 CIDKELFCNGKPDCKDESDENSCTV 152


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 0.51
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = -3

Query: 363 LTQNS-RCLHLNSLHPC---SGMGSLTAVITNLKP 271
           LTQ+S  C+HL+ LH C     +  L  V  NL+P
Sbjct: 78  LTQSSFECIHLSVLHKCYDYDAIPWLQNVEPNLRP 112


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +2

Query: 320 GCKEFRCKQREFCVSADLMCDGVDHCADGSDE 415
           G +E  CK +   V  +  CD    C +G  E
Sbjct: 23  GNQEDPCKLKSKVVGDETYCDRYWECVNGQQE 54


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +2

Query: 260 TDANGFKLVITAVKDPIPEHGCKEF 334
           T+   +  V   V + +P+H C E+
Sbjct: 257 TETKTWGSVFNTVLELMPKHACSEY 281


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 303 SLTAVITNLKPFASVPQLSVTYLS 232
           ++  +IT L+P+ + P   V Y S
Sbjct: 6   AVATIITLLQPYDATPARIVCYFS 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,028
Number of Sequences: 336
Number of extensions: 2208
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)