Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_M03
(503 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0437 - 3347960-3349246 37 0.008
02_03_0212 - 16460665-16460766,16460971-16461298,16461379-164615... 34 0.075
04_03_0376 + 15105874-15106230,15109207-15111573 32 0.30
06_03_1043 - 27097094-27097735 31 0.40
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 31 0.69
10_01_0329 - 3599571-3600554 30 0.92
10_01_0322 + 3516922-3517899 30 0.92
05_04_0116 + 18131510-18133192 30 0.92
10_01_0320 + 3506183-3507109 29 2.1
09_06_0177 + 21365314-21366100,21367451-21367578,21367715-213678... 29 2.8
05_01_0217 + 1630083-1630205,1630467-1630710,1631695-1632508,163... 29 2.8
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 29 2.8
11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142 28 3.7
01_05_0421 + 21990034-21990392,21991691-21992681 28 3.7
01_01_1206 - 9702128-9702184,9702272-9702323,9702410-9702471,970... 28 3.7
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 28 4.9
01_01_0046 - 331758-332627 28 4.9
12_02_1175 + 26702744-26704507 27 6.5
12_02_1131 - 26358339-26360609 27 6.5
12_02_0017 - 12357029-12357070,12357434-12357503,12357722-123578... 27 6.5
06_03_0649 + 23138442-23138842,23139576-23139849,23139929-231405... 27 6.5
06_02_0262 + 13563082-13563633 27 6.5
12_01_1105 + 11672118-11673245 27 8.6
11_06_0313 + 22306497-22308938 27 8.6
11_01_0243 + 1872229-1872446,1872745-1872842,1872991-1873073,187... 27 8.6
10_08_0645 - 19562886-19564484 27 8.6
05_06_0051 - 25190803-25191216,25191301-25191891,25193248-251933... 27 8.6
05_04_0439 + 21260445-21260790,21264038-21264786 27 8.6
03_02_0778 - 11123820-11124242,11125196-11125201 27 8.6
01_06_1808 - 40023533-40023966,40024078-40024204 27 8.6
01_06_0314 - 28410897-28410902,28410995-28411054,28411149-28411697 27 8.6
>11_01_0437 - 3347960-3349246
Length = 428
Score = 37.1 bits (82), Expect = 0.008
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = -3
Query: 453 PVPPFSGQRAAVSSSDPSAQWSTPSHMRSALTQNSRCLHLNSLHPCSGMGSLTAVITNLK 274
P P +G + +SS SA TPS S SR L L+S+ P + A+ + +
Sbjct: 3 PSPSAAGAASPSNSSAASASDPTPSWWESVSQARSRILALSSILPAPADSDVAALADSDR 62
Query: 273 PFASVPQLSVTYLSVTKLLR 214
P ++ + S Y++++ LR
Sbjct: 63 PARALLRSSAAYVALSAALR 82
>02_03_0212 -
16460665-16460766,16460971-16461298,16461379-16461502,
16461576-16461825,16462185-16462265,16463030-16463114,
16463200-16463321,16463865-16464672,16464775-16465027,
16465998-16466796
Length = 983
Score = 33.9 bits (74), Expect = 0.075
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = -3
Query: 501 SSEDPAATTTSHALPAPVPPFSGQRAAVSSSDPSAQWSTPSHMRSALTQNSRCLHLNSLH 322
S P+ +T++ P+P+P S + SSS P A STPS SA + + HL+ H
Sbjct: 26 SISSPSPSTSTPPPPSPIPSTSPRPTLRSSSLPPA--STPSPSSSASSSSGSLHHLHPTH 83
Query: 321 PCSGMGSLTA 292
+ A
Sbjct: 84 SLPAFSAAAA 93
>04_03_0376 + 15105874-15106230,15109207-15111573
Length = 907
Score = 31.9 bits (69), Expect = 0.30
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +2
Query: 239 YVTDNWGTDANGFKLVITAVKDPIPEH---GCKEFRCKQREFCVSADLM-CDGVDHCADG 406
+V+ N+G D +++ A K P P+ + R KQ + C L+ D V+H D
Sbjct: 253 HVSQNFGLDTILREMIEQATKQPCPQFKSLTALQKRLKQ-DLCEKRFLLVLDDVEHNKDI 311
Query: 407 SDEDTAALCPENGGTGA 457
S++D +AL E GG G+
Sbjct: 312 SEDDLSAL--EVGGAGS 326
>06_03_1043 - 27097094-27097735
Length = 213
Score = 31.5 bits (68), Expect = 0.40
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3
Query: 492 DPAATTTSHALPAPVPPFSGQRAAVSSSDPSA 397
DP AT + LP P+PP +G AA S + SA
Sbjct: 73 DPTATASWSRLPLPLPPVAGGPAAFSPAAASA 104
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 30.7 bits (66), Expect = 0.69
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 479 PPPATHYQHQYRHSQDREQQYLHLIRRR 396
PPP+ H QHQ++H Q + ++R+
Sbjct: 26 PPPSQHQQHQHQHQQPPHPHHHQYVQRQ 53
>10_01_0329 - 3599571-3600554
Length = 327
Score = 30.3 bits (65), Expect = 0.92
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 459 PAPVPPFSGQRAAVSSSDPSAQWST 385
PAP PP S +RAA +P+A ST
Sbjct: 6 PAPAPPASRKRAAAPDDEPTATGST 30
>10_01_0322 + 3516922-3517899
Length = 325
Score = 30.3 bits (65), Expect = 0.92
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 459 PAPVPPFSGQRAAVSSSDPSAQWST 385
PAP PP S +RAA +P+A ST
Sbjct: 8 PAPAPPASRKRAAAPDDEPTATGST 32
>05_04_0116 + 18131510-18133192
Length = 560
Score = 30.3 bits (65), Expect = 0.92
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -3
Query: 489 PAATTTSHALPAPVPPFSGQRAAVSSSDPSAQWSTPSHMRSALTQNSRCLH 337
P + A PAP PP + A ++S + + +H R+ T S LH
Sbjct: 105 PMMAGPAAAAPAPAPPLATMAVAQNASLAAVASALAAHRRNQATHRSAALH 155
>10_01_0320 + 3506183-3507109
Length = 308
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 459 PAPVPPFSGQRAAVSSSDPSA-QWSTPS 379
PAP PP S +RAA +P+A + STP+
Sbjct: 6 PAPAPPASRKRAAAPDHEPTASRSSTPA 33
>09_06_0177 +
21365314-21366100,21367451-21367578,21367715-21367870,
21368006-21368196,21369392-21369434,21369537-21369627,
21369859-21369935,21370278-21370366,21370474-21370657,
21370885-21371138,21371465-21371567,21371646-21371977,
21372060-21372504
Length = 959
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 200 GALFTRSNFVTLK-YVTDNWGTDANGFKLVITAVKDPIPEHGCKEFRCKQREFC 358
G L T F LK V +W D + + L + PI E C E R K+ E+C
Sbjct: 310 GCLLTCPVFNNLKCLVFGDWCMDFDLYPLRCVLKQSPILEELCVELREKECEYC 363
>05_01_0217 +
1630083-1630205,1630467-1630710,1631695-1632508,
1632775-1632844,1633007-1633239,1633345-1633564
Length = 567
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 237 LSVTKLLRVNRAPTCCLVLRHDRSTLAGVVA*APS*TYRWS 115
LSV K L V P CC++ R ++ AG+ + S + W+
Sbjct: 240 LSVLKHLEVKEIPKCCVLQRLSKNAKAGLPSVRKSDLHVWT 280
>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 368 DLMCDGVDHCADGSDEDTAALCPENG 445
D MC GV+ DGS++ ++ P++G
Sbjct: 4216 DFMCSGVNQATDGSEDIFDSVIPDDG 4241
>11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142
Length = 751
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 402 SAQWSTPSHMRSALTQNSRCLHLNSLHPCSGMGSLTAV 289
S QWS PS + + C +NS C G L AV
Sbjct: 501 SGQWSQPSTSDLSTRGSVECGSMNSCRACRGHSCLAAV 538
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 479 PPPATHYQHQYRHSQDREQQ 420
PPP H Q Q++H Q ++QQ
Sbjct: 415 PPPPHHGQPQHQHQQQQQQQ 434
>01_01_1206 -
9702128-9702184,9702272-9702323,9702410-9702471,
9702578-9702665,9703027-9703095,9703224-9703281,
9703895-9703996,9704075-9704179,9704273-9704624,
9706005-9706100,9706427-9706501,9707192-9707370,
9707501-9707740,9707922-9708017,9708193-9708306,
9708428-9708527
Length = 614
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 335 RCKQREFCVSADLMCDGVDHCADGSDEDTAALCPE 439
RC+ + D + D C DG+DE + CPE
Sbjct: 44 RCRDGSGRFARDKLNDDFCDCPDGTDEPGTSACPE 78
>02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = -1
Query: 491 IPLLPPPATHYQ--HQYRHSQDREQQYLH 411
+P PPP + Q H Y+H Q ++QQ H
Sbjct: 996 LPPPPPPPSLQQLHHPYQHQQQQQQQLYH 1024
>01_01_0046 - 331758-332627
Length = 289
Score = 27.9 bits (59), Expect = 4.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 479 PPPATHYQHQYRHSQDREQQ 420
PPP H+QHQ +D+E++
Sbjct: 105 PPPTHHHQHQQHKVKDQEEK 124
>12_02_1175 + 26702744-26704507
Length = 587
Score = 27.5 bits (58), Expect = 6.5
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = -3
Query: 441 FSGQRAAVSSSDPSAQWSTPSHMRSALTQNSRCLHLNSLHPCSGMGSLTAVITNLKPFAS 262
FSG AA SSS P + +++ +RC +L + PC+ +G + + F
Sbjct: 47 FSGV-AAASSSSPDSSSGGCRELQALDGDGARCRYLRAHAPCAPVGYVDYLRLLYCGFGR 105
Query: 261 VPQLSVTYLSVTKLL 217
P L L++ L+
Sbjct: 106 APWLGYAALALWLLV 120
>12_02_1131 - 26358339-26360609
Length = 756
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -3
Query: 450 VPPFSGQRAAVSSSDPSAQWSTPSHMRSALTQNSRCLHLNSLHPCSGMGSLTAVITNL 277
+PP S +++ P A+ +TP T+N R + PC G+ L A+ L
Sbjct: 69 IPPRSASADTINAWSPEAETTTPLMAVPHGTRNGRIIPYG--RPCRGLLLLHAIFARL 124
>12_02_0017 -
12357029-12357070,12357434-12357503,12357722-12357852,
12358836-12358882,12359762-12360044,12360547-12362413,
12362454-12362665
Length = 883
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = -3
Query: 471 SHALPAPVPPFSGQRAAVSSSDPSAQWSTPSHMRSALTQNSRCLHLNSLHPCSGMGSLTA 292
+H LPAP P SG+ A + PS + +TPS + ++ + HP G+ T
Sbjct: 59 AHPLPAPFPNLSGEPAPTPRA-PS-RHATPSSSPPSTPSSASAPPPSGRHPAFPWGASTH 116
Query: 291 VI 286
++
Sbjct: 117 LL 118
>06_03_0649 +
23138442-23138842,23139576-23139849,23139929-23140562,
23140771-23140826,23141178-23141282,23141295-23141535,
23142686-23142690
Length = 571
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 489 PAATTTSHALPAPVPPFSGQRAAVSSSD-PSAQWSTPSHMRSALTQNSR 346
PAAT++S A P +PP Q + + D P+ + P+ ++ T +R
Sbjct: 54 PAATSSSPAAPTAIPPRPPQSSPIFVPDSPNPSPAAPTSSLASGTSTAR 102
>06_02_0262 + 13563082-13563633
Length = 183
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 442 WRYWCW*CVAGGGSSG 489
WR W W C GGG G
Sbjct: 65 WRRWRWRCNVGGGRGG 80
>12_01_1105 + 11672118-11673245
Length = 375
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -3
Query: 459 PAPVPPFSGQRAAVSSSDPSAQWSTPSHMRSALTQNSRCLHLNSLH 322
P+P+ P A + + PSA + + T+ +R H+N L+
Sbjct: 249 PSPLYPIHSDDEAEAEATPSAMDISEASQEPETTRGTRMFHINDLN 294
>11_06_0313 + 22306497-22308938
Length = 813
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 489 PAATTTSHALPAPVPPFSGQRAAVSSSDPSAQWSTPSHMRSALTQN 352
P A T A+PA +PP AA +DP+ + H+ A N
Sbjct: 56 PYAGGTEQAMPASIPPMFASPAA--PADPNQRQPYAVHLNGAAPAN 99
>11_01_0243 +
1872229-1872446,1872745-1872842,1872991-1873073,
1873163-1873289,1873623-1873686,1873802-1873899,
1873981-1874065,1874179-1874302,1874608-1874709,
1874821-1874934,1875325-1875389,1875891-1875972,
1876069-1876152
Length = 447
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 155 PAKVDLSCRNTKQQVGALFTRSNFVTLKYVT 247
P +VDL C N K +G R V++ Y T
Sbjct: 369 PEQVDLDCSNGKNTIGLFSHRKLSVSVGYAT 399
>10_08_0645 - 19562886-19564484
Length = 532
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -3
Query: 468 HALPAPVPPFSGQRAAVSSSDP---SAQWS 388
H PAP PP RA+ +S P +A+WS
Sbjct: 430 HVAPAPAPPQQQPRASSASRPPPRLTARWS 459
>05_06_0051 -
25190803-25191216,25191301-25191891,25193248-25193317,
25193392-25193443,25195368-25195440,25195557-25195646
Length = 429
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 6/30 (20%)
Frame = -1
Query: 488 PLLPPP------ATHYQHQYRHSQDREQQY 417
P PPP A HYQ+QY++ Q + QY
Sbjct: 103 PPPPPPTSAAHHAYHYQYQYQYEQPKPHQY 132
>05_04_0439 + 21260445-21260790,21264038-21264786
Length = 364
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -3
Query: 312 GMGSLTAVITNLKPFASVPQLSVTYLSV 229
G G+ A+ ++L P++S+P SVT SV
Sbjct: 279 GGGAAAAMSSSLGPYSSIPTSSVTVASV 306
>03_02_0778 - 11123820-11124242,11125196-11125201
Length = 142
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +2
Query: 392 HCADGSDEDTAALCPENGGTGAGS----AWLVVVAAGS 493
HCA + A+ C E G G G+ WL V AG+
Sbjct: 62 HCAFPCEGAAASACSEGGEDGNGAVAQEVWLTVTGAGT 99
>01_06_1808 - 40023533-40023966,40024078-40024204
Length = 186
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 498 SEDPAATTTSHALPAPVPP 442
S +A +TS ALPAP PP
Sbjct: 133 SSSASAASTSSALPAPAPP 151
>01_06_0314 - 28410897-28410902,28410995-28411054,28411149-28411697
Length = 204
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -3
Query: 498 SEDPAATTTSHALPAPVPPFSGQRAAVSSSDPSAQWSTPSHMR 370
SED A + A PAP PP + S S P+ W T +R
Sbjct: 19 SEDSPAPAPAPA-PAPAPPQPSRTRLHSFSFPTLSWGTHRLLR 60
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,755,124
Number of Sequences: 37544
Number of extensions: 273631
Number of successful extensions: 1448
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1443
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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