Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_M03
(503 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 24 1.0
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 2.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.2
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 7.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.6
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 9.6
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 23.8 bits (49), Expect = 1.0
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 260 TDANGFKLVITAVKDPIPEHGCKEFR 337
T+ + V + D +P+H C E+R
Sbjct: 235 TETETWTRVFNTLVDLVPKHACAEYR 260
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 485 LLPPPATHYQHQYRHSQDREQQ 420
+LPP Q Q + SQ ++QQ
Sbjct: 966 ILPPVKVQSQQQSQQSQQQQQQ 987
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 4.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 447 PPFSGQRAAVSSSDPSAQWSTP 382
PP + + A+SSS+ WS P
Sbjct: 1009 PPINLEARALSSSEILITWSPP 1030
Score = 21.0 bits (42), Expect = 7.3
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 453 PVPPFSGQRAAVSSSDPSAQWSTPSHMRSALTQ 355
P PP S + A V+S + +W S + +T+
Sbjct: 908 PQPPNSLETAMVASRSINVKWQHKSQDTTEVTK 940
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 4.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 447 PPFSGQRAAVSSSDPSAQWSTP 382
PP + + A+SSS+ WS P
Sbjct: 1005 PPINLEARALSSSEILITWSPP 1026
Score = 21.0 bits (42), Expect = 7.3
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 453 PVPPFSGQRAAVSSSDPSAQWSTPSHMRSALTQ 355
P PP S + A V+S + +W S + +T+
Sbjct: 904 PQPPNSLETAMVASRSINVKWQHKSQDTTEVTK 936
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 470 ATHYQHQYRHSQDREQQYLHLIRR 399
++HY + S+DR ++Y RR
Sbjct: 228 SSHYSRERSCSRDRNREYKEKDRR 251
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 470 ATHYQHQYRHSQDREQQYLHLIRR 399
++HY + S+DR ++Y RR
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRR 251
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 470 ATHYQHQYRHSQDREQQYLHLIRR 399
++HY + S+DR ++Y RR
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRR 251
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 470 ATHYQHQYRHSQDREQQYLHLIRR 399
++HY + S+DR ++Y RR
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRR 251
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 470 ATHYQHQYRHSQDREQQYLHLIRR 399
++HY + S+DR ++Y RR
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRR 251
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 470 ATHYQHQYRHSQDREQQYLHLIRR 399
++HY + S+DR ++Y RR
Sbjct: 217 SSHYSRERSCSRDRNREYRKKDRR 240
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 470 ATHYQHQYRH 441
AT+YQHQ H
Sbjct: 91 ATYYQHQQDH 100
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,897
Number of Sequences: 438
Number of extensions: 2049
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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