Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_M02
         (689 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    27   0.22 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               25   0.68 
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   6.3  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 155 HTC-RNHRQELVGHLLMMPAWVATTLGFENLSSNTNRC 45
           HTC  NH ++L G++  +  WV   L  ++L+   N C
Sbjct: 97  HTCIENHLKQL-GYVQKLDTWVPHELKEKHLTQRINSC 133


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 197 VDGYELTSIDMESDHNITEP 256
           V+ +E+T  D+E++ NI  P
Sbjct: 6   VESFEITDYDLENEFNINRP 25


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 481 QKTTRSLFNRCK 516
           Q +T+ LFN+CK
Sbjct: 89  QDSTKKLFNKCK 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,877
Number of Sequences: 438
Number of extensions: 2677
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)