Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_L24
         (508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   4.8  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   8.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 319  PSFHPVRYPATPRHRLPSSASIWEPTWCQQLLSHTKRPKQTL 444
            PS    + P  P +R PS+ + W+    +   S T RP  T+
Sbjct: 1161 PSTSSWQKPTKPSYRPPSTTNHWQ---TKTTTSTTTRPTTTV 1199


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 248 LIFDNLKKSIAYTLTSNIPEISPFLAF 328
           L++    K  +Y  + N+P   PFL F
Sbjct: 12  LLYYIYSKHYSYWQSKNVPTDKPFLFF 38


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 453 PPRNPFRDKLVNERL 497
           PPR P + KLV  +L
Sbjct: 60  PPRTPLQPKLVAGKL 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,585
Number of Sequences: 336
Number of extensions: 2297
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)