Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_L24
(508 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42324| Best HMM Match : No HMM Matches (HMM E-Value=.) 226 9e-60
SB_227| Best HMM Match : E1-E2_ATPase (HMM E-Value=0) 134 3e-32
SB_52615| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 2e-27
SB_47271| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 3e-18
SB_5248| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_43063| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 3e-14
SB_52466| Best HMM Match : Cation_ATPase_C (HMM E-Value=6.7e-12) 69 2e-12
SB_20525| Best HMM Match : E1-E2_ATPase (HMM E-Value=0) 58 3e-09
SB_19943| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_41088| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 5e-05
SB_33263| Best HMM Match : Hydrolase (HMM E-Value=0.052) 44 5e-05
SB_14128| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.008
SB_53526| Best HMM Match : Cohesin (HMM E-Value=8.4) 37 0.011
SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.034
SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021) 32 0.24
SB_20633| Best HMM Match : Toxin_13 (HMM E-Value=0.13) 31 0.72
SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.95
SB_56051| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.95
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_56407| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_33380| Best HMM Match : Herpes_capsid (HMM E-Value=3) 29 2.2
SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45) 29 2.9
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 29 2.9
SB_31467| Best HMM Match : CTP_transf_2 (HMM E-Value=0.85) 28 3.8
SB_42154| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_56270| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33) 28 5.1
SB_30955| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_53612| Best HMM Match : SRCR (HMM E-Value=0) 27 6.7
SB_6242| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_56700| Best HMM Match : rve (HMM E-Value=1.1e-11) 27 8.9
SB_47836| Best HMM Match : F5_F8_type_C (HMM E-Value=0.022) 27 8.9
SB_33074| Best HMM Match : TUDOR (HMM E-Value=1.9e-30) 27 8.9
SB_22520| Best HMM Match : F5_F8_type_C (HMM E-Value=0.022) 27 8.9
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 27 8.9
SB_36904| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_42324| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 226 bits (552), Expect = 9e-60
Identities = 110/121 (90%), Positives = 115/121 (95%)
Frame = +2
Query: 2 HTEIVFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ 181
H EIVFARTSPQQKLIIVEGCQR GAIVAVTGDGVNDSPALKKADIG+AMGI+GSDVSKQ
Sbjct: 141 HKEIVFARTSPQQKLIIVEGCQRNGAIVAVTGDGVNDSPALKKADIGIAMGISGSDVSKQ 200
Query: 182 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGT 361
AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEI+PFL FI+ IP PLGT
Sbjct: 201 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLMFIVAGIPQPLGT 260
Query: 362 V 364
+
Sbjct: 261 I 261
Score = 63.3 bits (147), Expect = 1e-10
Identities = 31/52 (59%), Positives = 33/52 (63%)
Frame = +3
Query: 351 PSAPSAILCIDLGTDMVPXXXXXXXXXXXDIMKRPPRNPFRDKLVNERLISM 506
P ILCIDLGTDMVP DIMKR PR+P +KLVNERLISM
Sbjct: 257 PLGTITILCIDLGTDMVPAISLAYEEAESDIMKRMPRDPRTEKLVNERLISM 308
>SB_227| Best HMM Match : E1-E2_ATPase (HMM E-Value=0)
Length = 1003
Score = 134 bits (325), Expect = 3e-32
Identities = 66/67 (98%), Positives = 66/67 (98%)
Frame = +2
Query: 2 HTEIVFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ 181
HTEIVFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ
Sbjct: 700 HTEIVFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ 759
Query: 182 AADMILL 202
AADMI L
Sbjct: 760 AADMIFL 766
>SB_52615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1154
Score = 119 bits (286), Expect = 2e-27
Identities = 57/117 (48%), Positives = 84/117 (71%)
Frame = +2
Query: 14 VFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADM 193
VF R SP+ K+ IV+ Q+ G +VA+TGDGVND+ ALK+ADIG+AMG +G+DVSK+AA+M
Sbjct: 660 VFYRVSPRHKVAIVKALQQHGHVVAMTGDGVNDAVALKRADIGIAMGKSGTDVSKEAAEM 719
Query: 194 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGTV 364
IL+DD+F +I+ +EEG+ IF N+K + + L+++I IS +P PL +
Sbjct: 720 ILVDDDFNTIMAAIEEGKGIFYNIKNFVRFQLSTSIAAISLITISTFLKLPNPLNAM 776
>SB_47271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 811
Score = 88.2 bits (209), Expect = 3e-18
Identities = 45/75 (60%), Positives = 55/75 (73%), Gaps = 5/75 (6%)
Frame = +2
Query: 14 VFARTSPQQKLIIVEGC-----QRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSK 178
V AR+SP+ K +V+G IVAVTGDG ND PALKKAD+G AMGIAG+DV+K
Sbjct: 737 VLARSSPEDKYTLVKGIIDSKLNPAREIVAVTGDGTNDGPALKKADVGFAMGIAGTDVAK 796
Query: 179 QAADMILLDDNFASI 223
+A+D+IL DDNF SI
Sbjct: 797 EASDIILTDDNFRSI 811
>SB_5248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1311
Score = 76.6 bits (180), Expect = 1e-14
Identities = 51/108 (47%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Frame = +2
Query: 14 VFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADM 193
+F+R P K IV Q G I A+TGDGVND+PALKKA+IGVAMG +G+ V+K A+
Sbjct: 693 LFSRVEPSHKSKIVTYLQEEGEISAMTGDGVNDAPALKKAEIGVAMG-SGTAVAKTAS-- 749
Query: 194 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPE-ISPFLAFIL 334
EEGR I+DN K+ I Y ++SNI E +S FL L
Sbjct: 750 --------------EEGRSIYDNTKQFIRYLISSNIGEVVSIFLTAAL 783
>SB_43063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 74.9 bits (176), Expect = 3e-14
Identities = 41/120 (34%), Positives = 66/120 (55%)
Frame = +2
Query: 14 VFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADM 193
VFA P K+ + Q G + A+ GDG+NDSPAL +A +G+A+G G+DV+ +AAD+
Sbjct: 6 VFAEVLPSHKVEKIRALQAKGFVTAMVGDGINDSPALAQAHVGIAIG-TGTDVAVEAADI 64
Query: 194 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGTVCHP 373
+L+ + + ++ R+ + + A+ L N+ I PF A + PLG V P
Sbjct: 65 VLIKSDLMDVAAAIDLSRVTVRRIHLNFAFALLYNMIGI-PFAAGVF----EPLGVVMKP 119
>SB_52466| Best HMM Match : Cation_ATPase_C (HMM E-Value=6.7e-12)
Length = 573
Score = 69.3 bits (162), Expect = 2e-12
Identities = 32/99 (32%), Positives = 64/99 (64%), Gaps = 5/99 (5%)
Frame = +2
Query: 14 VFARTSPQQKLIIVEGCQRM-----GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSK 178
V +R +P+ K ++ +R G +VAV GV+D+ L+ AD+G++MG G+D+++
Sbjct: 116 VVSRCTPEGKRSFMQAIRRSRVRREGEVVAVVASGVHDANFLRDADVGLSMGATGTDIAQ 175
Query: 179 QAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTS 295
+A+D++L D F+S++ ++ GR I++ + K + + LT+
Sbjct: 176 EASDIVLKGDKFSSVLDTIKWGRHIYETVLKFLQFQLTA 214
>SB_20525| Best HMM Match : E1-E2_ATPase (HMM E-Value=0)
Length = 1145
Score = 58.4 bits (135), Expect = 3e-09
Identities = 28/69 (40%), Positives = 44/69 (63%)
Frame = +2
Query: 83 VAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDN 262
V + GDGVND PAL AD+G+AMG G+ ++ +AAD+ L+ +N A I V G+
Sbjct: 1006 VGMVGDGVNDGPALAAADLGIAMGAGGTALAVEAADVTLMSNNLAKIPELVSLGKFCRTI 1065
Query: 263 LKKSIAYTL 289
+ ++IA ++
Sbjct: 1066 ITQNIALSV 1074
>SB_19943| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 52.0 bits (119), Expect = 3e-07
Identities = 21/47 (44%), Positives = 35/47 (74%)
Frame = +2
Query: 152 GIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLT 292
G++GSDV+K +AD++LLDDNF SIV ++ GR +++ + K + + T
Sbjct: 1 GVSGSDVAKDSADVVLLDDNFGSIVWAIKWGRNVYNTVVKFLMFQFT 47
>SB_41088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 44.4 bits (100), Expect = 5e-05
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 14 VFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAM 151
VFAR +P+QK +++ + G + + GDG ND ALK A GVA+
Sbjct: 444 VFARVAPKQKELVITRLKSRGYVTLMCGDGTNDVGALKHAHCGVAL 489
>SB_33263| Best HMM Match : Hydrolase (HMM E-Value=0.052)
Length = 335
Score = 44.4 bits (100), Expect = 5e-05
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Frame = +2
Query: 14 VFARTSPQQKLIIVE-----GCQRMGAIVAVTGDGVNDSPALKKADIGVAM 151
V AR + + K +V+ G R G +VAVTG GV+D P L+KAD+G M
Sbjct: 285 VLARATARDKYTLVKHVMGSGVNRQGEMVAVTGAGVHDGPVLRKADVGFTM 335
>SB_14128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1138
Score = 37.1 bits (82), Expect = 0.008
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +2
Query: 11 IVFARTSPQQKLIIVEGCQR-MGAIVAVTGDGVNDSPALKKADIGVAMGIAGSD--VSKQ 181
++ R +P QK +VE + + + GDG ND ++ AD+G+ GI G + +
Sbjct: 897 VLCCRATPMQKASVVELVRDGLKVMTLAIGDGANDVSMIQMADVGI--GITGQEGMQAVM 954
Query: 182 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSN 298
A+D + F + + V G +D + K I Y N
Sbjct: 955 ASDFAIARFRFLAQLLLV-HGHWCYDRITKMILYFFYKN 992
>SB_53526| Best HMM Match : Cohesin (HMM E-Value=8.4)
Length = 248
Score = 36.7 bits (81), Expect = 0.011
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = -2
Query: 243 PSSTPVTIEAKLSSSRIISAACLETSEPAIPIATPMSAFFKAGESLTPSPVTA 85
P+ TPVT + + +S + + + A P TP++A A S TP+PVTA
Sbjct: 117 PTPTPVTAKVNVDASPTPTPVTAKVNADASPNPTPVTAKVNADTSPTPTPVTA 169
Score = 36.7 bits (81), Expect = 0.011
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = -2
Query: 243 PSSTPVTIEAKLSSSRIISAACLETSEPAIPIATPMSAFFKAGESLTPSPVTATMAPMRW 64
P+ TPVT + +S + + + A P TP++A A S TP+PVTA +
Sbjct: 147 PNPTPVTAKVNADTSPTPTPVTAKVNVDASPTPTPVTAKVNADTSPTPTPVTAKVCVETA 206
Query: 63 QPSTMIS 43
P ++
Sbjct: 207 PPQVCVA 213
Score = 34.3 bits (75), Expect = 0.059
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -2
Query: 243 PSSTPVTIEAKLSSSRIISAACLETSEPAIPIATPMSAFFKAGESLTPSPVTA 85
P+ TPVT + +S + + + A P TP++A A S P+PVTA
Sbjct: 102 PNPTPVTAKVNADTSPTPTPVTAKVNVDASPTPTPVTAKVNADASPNPTPVTA 154
Score = 32.7 bits (71), Expect = 0.18
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -2
Query: 243 PSSTPVTIEAKLSSSRIISAACLETSEPAIPIATPMSAFFKAGESLTPSPVTA 85
P+ TPVT + +S + + + P TP++A S TP+PVTA
Sbjct: 87 PTPTPVTAKVNADASPNPTPVTAKVNADTSPTPTPVTAKVNVDASPTPTPVTA 139
Score = 32.7 bits (71), Expect = 0.18
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -2
Query: 243 PSSTPVTIEAKLSSSRIISAACLETSEPAIPIATPMSAFFKAGESLTPSPVTA 85
P+ TPVT + +S + + + P TP++A S TP+PVTA
Sbjct: 132 PTPTPVTAKVNADASPNPTPVTAKVNADTSPTPTPVTAKVNVDASPTPTPVTA 184
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2
Query: 228 VTIEAKLSSSRIISAACLETSEPAIPIATPMSAFFKAGESLTPSPVTA 85
+T + + +S + + + A P TP++A A S TP+PVTA
Sbjct: 77 MTAKVNVDASPTPTPVTAKVNADASPNPTPVTAKVNADTSPTPTPVTA 124
>SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 35.1 bits (77), Expect = 0.034
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 IVFARTSPQQKLIIVEGCQ-RMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 169
++ R +P QK ++V+ + A+ GDG ND +K A IGV GI+G +
Sbjct: 741 VICCRVTPLQKALVVQLVKDNKKAVTLAIGDGANDVSMIKAAHIGV--GISGQE 792
>SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021)
Length = 358
Score = 32.3 bits (70), Expect = 0.24
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +1
Query: 241 GSPYIR-QLEEINRVHPHFEHSRNIPFPSFHPVRYPATPRHRLPSSAS--IWEPTWCQQL 411
G PY++ Q +R HPH ++P PS+ P P P +A+ I +P QL
Sbjct: 30 GCPYLQNQSTREHRHHPHHRQIHHVPNPSYCPSMSSTVPLQHPPVNATPVIIDP---DQL 86
Query: 412 LSHTKR-PKQTL*NGLL 459
SH + P +L N L+
Sbjct: 87 PSHVRAVPITSLPNRLI 103
>SB_20633| Best HMM Match : Toxin_13 (HMM E-Value=0.13)
Length = 225
Score = 30.7 bits (66), Expect = 0.72
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 326 FILCDIPLPLGTVCHPLHRSGNRHGASNCSRIRSGRSRHYE 448
F+ CD L C L N + S CS++R+GR HY+
Sbjct: 183 FLRCDNQLDCAVACGKL----NANCMSQCSKLRTGRGLHYK 219
>SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 30.3 bits (65), Expect = 0.95
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 153 PIATPMSAFFKAGESLTPSPVTATMAPMRWQPSTMISF 40
P+ P K+ + TPSP T +P+ +P+T + F
Sbjct: 31 PVTAPGKHINKSSKPFTPSPPRCTPSPLPRRPNTTVGF 68
>SB_56051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 47 IIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAM 151
+++ + G + + GDG ND ALK A GVA+
Sbjct: 2 LVITRLKSRGYVTLMCGDGTNDVGALKHAHCGVAL 36
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = -2
Query: 240 SSTPVTIEAKLSSSRIISAACLETSEPAIPIATPMSAFFKAGESLTPSPVTATMAPMRWQ 61
SST VT S+ S P++ +T M+ + +TPS ++T A
Sbjct: 1868 SSTQVTPSVASSTQAATSVTPSTQGMPSVAPSTQMTPSVASSTQVTPSVASSTQAAPSVT 1927
Query: 60 PSTMIS 43
PST+++
Sbjct: 1928 PSTLMT 1933
>SB_56407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 29.5 bits (63), Expect = 1.7
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = -2
Query: 288 RVYAIDFFKLSNIRRPSSTPVTIEAKLSSSRIISAACLETSEPAI-PIATPMSAFFKAGE 112
R I KLS + S + VT+ AK SSR +S L E + ++ K
Sbjct: 617 RAMYITPLKLSAVNSTSYSNVTLIAKWESSRNLSHGILAGYEVIYSSLENSNTSLLKVDN 676
Query: 111 SLTPSPVTATMAPMRWQPSTMISFCWGDVRANTI 10
S P+T T +P T+ +FC VR NT+
Sbjct: 677 SSAVVPLTVT----DLKPCTVYAFC---VRPNTL 703
>SB_33380| Best HMM Match : Herpes_capsid (HMM E-Value=3)
Length = 474
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = -2
Query: 246 RPSSTPVTIEAKLSSSRIISAACLETSEPAIPIATPMSAFFKAGESLTPSP 94
RP+ST +T A +SS +++ TS P++T S A SLTP+P
Sbjct: 133 RPASTSLTTSAAFTSS---TSSAASTSLTTSPVSTS-STSSAASTSLTPAP 179
>SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 277 RVHPHFEHSRNIPFPSFHPVRYPATPRHRLPSSASIWEPTWCQQLLSH 420
R HP S + P P + +P RH LP A+ PT C ++SH
Sbjct: 10 RHHPPPPASSSSPTPCYGITPHPLH-RHHLPPPATASPPTPCIVIISH 56
>SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45)
Length = 825
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = -2
Query: 243 PSSTPVTIEAKLSSSRIISAACLETSEPAIPIATPMSAFFKAGESLTPSPVTATMAPMRW 64
P STPV+ + ++ ++ ++ E E A P S+TP +T R
Sbjct: 146 PLSTPVSTTSTKATQGLLPSSTPEMPETAKPTTVVTQVTTMPNTSVTPLTSPSTSVTQRT 205
Query: 63 QPSTMIS 43
+P+T ++
Sbjct: 206 RPTTPVT 212
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 377 HRSGNRHGASNCSRIRSGRSRHYETAS*ESVSRQTCQREI 496
HRS RH S SR RS + +++S E +S+ + E+
Sbjct: 60 HRSSRRHRHSRHSRSRSLSPKRVDSSSEEEISKPLSEEEM 99
>SB_31467| Best HMM Match : CTP_transf_2 (HMM E-Value=0.85)
Length = 1459
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 11 IVFARTSPQQKLIIVE--GCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 169
++ R SP QK +V+ + + GDG ND +++A +G+ G+ G +
Sbjct: 1186 VLCCRMSPLQKAQVVQLVKVSKEKPVTLAIGDGANDCGMIQEAHVGI--GVMGKE 1238
>SB_42154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 194 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLA 325
+L + N A++ G+E+G I+D L++S T +I E + +LA
Sbjct: 213 LLPESNVAAMCAGIEQGNRIYD-LQRSSLPTRYLSIEEAAGYLA 255
>SB_56270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1207
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 103 CQRLARLEESR-HWRRYGYRWLGRLQTGRR 189
C RL + + H +R+GYR L R+ GRR
Sbjct: 711 CLRLVNTRDDKTHGKRHGYRKLSRVCGGRR 740
>SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33)
Length = 708
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -2
Query: 279 AIDFFKLSNIRRPSSTPVTIEAKLSSSRIISAACLETSEPA 157
A+DFFK NIRR VTI+ + +S + SA+ T EP+
Sbjct: 582 ALDFFK--NIRRGV---VTIKVRTGASGLPSASTFNTPEPS 617
>SB_30955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 971
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 194 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLA 325
+L + N A++ G+E+G I+D L++S T +I E + +LA
Sbjct: 819 LLPESNVAAMCVGIEQGNRIYD-LQRSSLPTRYLSIEEAAGYLA 861
>SB_53612| Best HMM Match : SRCR (HMM E-Value=0)
Length = 409
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -2
Query: 279 AIDFFKLSNIRRPSSTPVTIEAKLSSSRIISAACLETSEPAIPIATPMSA 130
AI KL + +STP T ++ R A +S+P+ P P SA
Sbjct: 356 AILKMKLQGLASSASTPATPDSSPKRKRTRQANSASSSQPSSPHPAPTSA 405
>SB_6242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 74 GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLD-DNFASIVTGVEEGRL 250
G +V + ++ P ++ D+G MG+ G D +K D + + +N ++ + VEE
Sbjct: 262 GVLVPIRDHDLHVKPGVRIDDMGHKMGLNGVDNAKFYFDNVHVPRENLLNVYSEVEEDGT 321
Query: 251 IFDNLKKSI 277
+++ SI
Sbjct: 322 YTTSIEGSI 330
>SB_56700| Best HMM Match : rve (HMM E-Value=1.1e-11)
Length = 1140
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 124 EESRHWRRYGYRWLGRLQTGRR 189
+E H +R+GYR L R+ GRR
Sbjct: 557 DEKTHGKRHGYRKLSRVCGGRR 578
>SB_47836| Best HMM Match : F5_F8_type_C (HMM E-Value=0.022)
Length = 1002
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 65 QRMGAIVAVTGDGVNDSPALKKADIGVAMGIAG--SDVSKQAADMILLDDNF 214
Q MGA+ + G G++ + L+ +G+ G+ G ++ QA D++ +F
Sbjct: 669 QGMGAVTNLQGQGMDLAGGLQSQGMGMVKGLTGDKGGITGQADDLMKKAQDF 720
>SB_33074| Best HMM Match : TUDOR (HMM E-Value=1.9e-30)
Length = 405
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 155 IAGSDVSKQAADMILLDDNFASI-VTGVEEGRLIFDNLKKSIA 280
I GSD S ++L +D+F + V+ VE L F L S A
Sbjct: 146 IPGSDPSSTLETVVLSEDDFTEVFVSAVENPGLFFVQLNSSSA 188
>SB_22520| Best HMM Match : F5_F8_type_C (HMM E-Value=0.022)
Length = 703
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 65 QRMGAIVAVTGDGVNDSPALKKADIGVAMGIAG--SDVSKQAADMILLDDNF 214
Q MGA+ + G G++ + L+ +G+ G+ G ++ QA D++ +F
Sbjct: 566 QGMGAVTNLQGQGMDLAGGLQSQGMGMVKGLTGDKGGITGQADDLMKKAQDF 617
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 124 EESRHWRRYGYRWLGRLQTGRR 189
++ RH R+GYR L R+ GRR
Sbjct: 592 DDKRHGERHGYRNLSRVCGGRR 613
>SB_36904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 198 CSMTTSLQSLPASKRVALYST 260
C + T L +PASK++ +Y+T
Sbjct: 24 CLVNTKLHMVPASKKIVMYTT 44
>SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 437 CFGRFVCESNCWHHVGSQIDAEDGRRCRGVAGY 339
C R +C SN H GS +D G RC GY
Sbjct: 170 CEERSICFSNPCLHGGSCVDEMYGFRCNCPIGY 202
>SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1726
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 270 NQSRTPSLRTFQKYPLS*LSSCAISRYPSAPSAILC 377
++ + PSL+T QK P + SC + + PS I C
Sbjct: 987 SKRKRPSLKTVQKRPKTVPWSCVACTFVNDPSMIEC 1022
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,704,363
Number of Sequences: 59808
Number of extensions: 318466
Number of successful extensions: 1195
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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