Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_L24
         (508 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.45 
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    24   1.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   3.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   3.2  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   9.7  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    21   9.7  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 236 EEGRLIFDNLKKSIAYTLTSNIPEISPFLAFIL 334
           + G +I D  + S+ +TL  +  EIS  L F+L
Sbjct: 200 KNGSVILDTARCSMKWTLIEHAFEISTMLFFVL 232


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = -2

Query: 438 LLRPLRMREQLLAPCRFPDRCRGWQTVPRGSGISHRMKARKGDISGMFE 292
           LL   R  ++LL P +  D C G +     +G+S+R      D    ++
Sbjct: 68  LLLSTRYDKRLLPPVQDADFCCGMRWPGDATGLSNRSSTSSNDPKNQYK 116


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +2

Query: 143 VAMGIAGSDVSKQAADMILLD 205
           VA+G+   +V ++AAD  LL+
Sbjct: 11  VALGVCAPNVKQRAADQDLLN 31


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 229  GND*SEVVIEQNHIGGLFGDVRASDTHSD 143
            G+D  +VV +Q  +GG   D R  D   +
Sbjct: 1614 GSDKDDVVYQQTGVGGATLDKRRPDLRDE 1642


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 344 PLPLGTVCHPLHRSG 388
           PLPL T C  L  SG
Sbjct: 443 PLPLHTECEDLSVSG 457


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 344 PLPLGTVCHPLHRSG 388
           PLPL T C  L  SG
Sbjct: 443 PLPLHTECEDLSVSG 457


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,112
Number of Sequences: 438
Number of extensions: 3016
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)