Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_L23
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    27   0.13 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.68 
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    23   2.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.4  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 418 ITLFKPRRHXLLKXFXSRQISVGLIMEPLLL*R 516
           +T+FK R   L K   S +ISVGLI +  +L R
Sbjct: 129 LTVFKIRYKDLNKALESSKISVGLIRDTAVLYR 161


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.68
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 617 YTYCSSSFYDVHKLIALCHS*RNTVRCHFSC 525
           Y YC S  ++VH L  LC S   TV   F C
Sbjct: 58  YFYCVSITFNVHLLFLLC-SGYFTVHLLFYC 87



 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 617 YTYCSSSFYDVHKLIALC 564
           Y YC+   + VH L  LC
Sbjct: 148 YFYCAFIIFTVHLLFLLC 165


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 42  QKKVLSLFQDVDQVNVMMNTTKLERTMTL 128
           ++K    F+D+    VM N  + +RT +L
Sbjct: 84  RRKAPQSFEDIQHQRVMANVRERQRTQSL 112


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 471 TNFCRVNNGTTFTLKIXSAAKMATNGIPS 557
           +N    +NG   TL   S+    TN +PS
Sbjct: 51  SNLLCASNGLVTTLASGSSLNGLTNNVPS 79


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -3

Query: 110  QFCSIHHHVN 81
            + CS+HHH++
Sbjct: 1303 KLCSLHHHLS 1312


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,811
Number of Sequences: 336
Number of extensions: 3095
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)