Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_L22
(497 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7985 Cluster: PREDICTED: similar to Collagen t... 211 6e-54
UniRef50_P08120 Cluster: Collagen alpha-1(IV) chain precursor; n... 193 2e-48
UniRef50_Q4SZ73 Cluster: Chromosome undetermined SCAF11805, whol... 185 4e-46
UniRef50_P08572 Cluster: Collagen alpha-2(IV) chain precursor [C... 185 6e-46
UniRef50_UPI0000613E3C Cluster: Collagen alpha-2(IV) chain; n=2;... 183 2e-45
UniRef50_P29400 Cluster: Collagen alpha-5(IV) chain precursor; n... 180 2e-44
UniRef50_Q07265 Cluster: 3 alpha procollagen; n=4; Strongylocent... 175 6e-43
UniRef50_P55787 Cluster: Collagen alpha-4(IV) chain; n=46; Eumet... 171 7e-42
UniRef50_P17139-2 Cluster: Isoform b of P17139 ; n=2; Caenorhabd... 170 1e-41
UniRef50_Q26640 Cluster: Alpha2(IV)-like collagen; n=4; Strongyl... 169 3e-41
UniRef50_P53420 Cluster: Collagen alpha-4(IV) chain precursor; n... 167 9e-41
UniRef50_Q4S0I4 Cluster: Chromosome 2 SCAF14781, whole genome sh... 165 4e-40
UniRef50_UPI00015B49AB Cluster: PREDICTED: similar to alpha-5 ty... 164 1e-39
UniRef50_Q4SZ69 Cluster: Chromosome undetermined SCAF11805, whol... 99 3e-39
UniRef50_Q28084 Cluster: Collagen alpha-3(IV) chain; n=13; cellu... 159 4e-38
UniRef50_Q9VMV5 Cluster: CG16858-PA; n=6; Schizophora|Rep: CG168... 158 7e-38
UniRef50_Q01955 Cluster: Collagen alpha-3(IV) chain precursor (G... 156 3e-37
UniRef50_UPI000065E567 Cluster: Homolog of Brachydanio rerio "Co... 153 2e-36
UniRef50_Q58FS7 Cluster: Type IV collagen alpha 3 chain; n=2; Da... 151 8e-36
UniRef50_Q7PVR6 Cluster: ENSANGP00000016652; n=3; Endopterygota|... 150 1e-35
UniRef50_UPI000065E566 Cluster: Homolog of Homo sapiens "Splice ... 148 8e-35
UniRef50_Q9GQB1 Cluster: Type IV collagen alpha 1 chain precurso... 141 7e-33
UniRef50_UPI00006608B5 Cluster: Homolog of Homo sapiens "Tumstat... 138 5e-32
UniRef50_UPI00015A592A Cluster: Type IV collagen alpha 4 chain; ... 131 1e-29
UniRef50_Q4TZW9 Cluster: Type IV collagen alpha 4 chain; n=3; Da... 131 1e-29
UniRef50_Q5C3P1 Cluster: SJCHGC06113 protein; n=2; Platyhelminth... 111 6e-24
UniRef50_O09238 Cluster: Collagen type IV; n=2; Pseudocorticium ... 111 6e-24
UniRef50_UPI0000DBF028 Cluster: UPI0000DBF028 related cluster; n... 85 8e-16
UniRef50_UPI0000DA44CD Cluster: PREDICTED: similar to procollage... 65 7e-10
UniRef50_Q5BYE6 Cluster: SJCHGC08138 protein; n=1; Schistosoma j... 56 4e-07
UniRef50_Q4SB07 Cluster: Chromosome undetermined SCAF14677, whol... 54 2e-06
UniRef50_A7T795 Cluster: Predicted protein; n=1; Nematostella ve... 48 2e-04
UniRef50_A7T3G2 Cluster: Predicted protein; n=1; Nematostella ve... 48 2e-04
UniRef50_A1ZSZ5 Cluster: Putative uncharacterized protein; n=1; ... 33 4.7
>UniRef50_UPI0000DB7985 Cluster: PREDICTED: similar to Collagen type
IV CG4145-PA, isoform A isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Collagen type IV
CG4145-PA, isoform A isoform 1 - Apis mellifera
Length = 1913
Score = 211 bits (516), Expect = 6e-54
Identities = 91/141 (64%), Positives = 110/141 (78%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
PIPMMPV+ +EI +YISRCVVCEVP+NV+AVHSQ+L+IP CP GW+ LWIGYSF+MHT
Sbjct: 1773 PIPMMPVQESEIEQYISRCVVCEVPANVLAVHSQSLNIPDCPQGWTGLWIGYSFLMHTGA 1832
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQ 366
L+S GSCLEDFRA PFIECNG G CH++ N++SFW+ TIED QQF PE+Q
Sbjct: 1833 GAQGGGQSLSSSGSCLEDFRATPFIECNGNKGQCHYYMNEISFWMATIEDRQQFQAPEQQ 1892
Query: 367 TLKSGRLLERVSGCAVCIXNT 429
TLK+G L ++S C VCI NT
Sbjct: 1893 TLKAGNLRSKISRCQVCIKNT 1913
Score = 31.5 bits (68), Expect(2) = 0.019
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 223 GSCLEDFRAIPFIECNGEGGTCHHFANK--LSFWLTTIEDSQQFAMPERQTLKSGRLLER 396
GSC+ F +PF+ C+ C H+ N+ S+WL+T MP ++ + +
Sbjct: 1736 GSCVRKFSTMPFLFCD-INNVC-HYGNRGDRSYWLSTTSPIPM--MP----VQESEIEQY 1787
Query: 397 VSGCAVC 417
+S C VC
Sbjct: 1788 ISRCVVC 1794
Score = 28.3 bits (60), Expect(2) = 0.019
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFV 171
++ HSQ+ +P C G +LW GYS +
Sbjct: 1668 LLVKHSQSQLLPVCDAGHIKLWEGYSLL 1695
>UniRef50_P08120 Cluster: Collagen alpha-1(IV) chain precursor; n=5;
Diptera|Rep: Collagen alpha-1(IV) chain precursor -
Drosophila melanogaster (Fruit fly)
Length = 1775
Score = 193 bits (470), Expect = 2e-48
Identities = 84/141 (59%), Positives = 100/141 (70%)
Frame = +1
Query: 10 IPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXX 189
IPMMPVE EI +YISRCVVCE P+NVIAVHSQT+++P CP GW LWIGYSF+MHT
Sbjct: 1635 IPMMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWIGYSFLMHTAVG 1694
Query: 190 XXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQT 369
L SPGSCLEDFRA PFIECNG GTCH + SFW+ +E SQ F P++QT
Sbjct: 1695 NGGGGQALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQT 1754
Query: 370 LKSGRLLERVSGCAVCIXNTT 432
+K+G VS C VC+ N++
Sbjct: 1755 IKAGERQSHVSRCQVCMKNSS 1775
Score = 54.4 bits (125), Expect = 1e-06
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
+I HSQ+ +P C G +ELW GYS +++ L GSC+ F +P + C
Sbjct: 1556 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDL---GSCVPRFSTLPVLSC 1611
Query: 268 NGEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
G+ C++ + N +FWLTT A+P +++ + + +S C VC
Sbjct: 1612 -GQNNVCNYASRNDKTFWLTT-----NAAIP-MMPVENIEIRQYISRCVVC 1655
>UniRef50_Q4SZ73 Cluster: Chromosome undetermined SCAF11805, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF11805, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1026
Score = 185 bits (451), Expect = 4e-46
Identities = 83/137 (60%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
Frame = +1
Query: 10 IPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXX 189
IPMMPV +I YISRC VCE PS +AVHSQ + IP CP GW LWIGYSF+MHT
Sbjct: 888 IPMMPVAEAQIQAYISRCSVCEAPSQAVAVHSQDMTIPTCPPGWRSLWIGYSFLMHTAAG 947
Query: 190 XXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQ-FAMPERQ 366
L SPGSCLEDFRA PFIECNG GTCH+FANK SFWLTT++ +Q+ F P ++
Sbjct: 948 AEGGGQSLVSPGSCLEDFRATPFIECNGAKGTCHYFANKYSFWLTTVDPNQEFFYSPSQE 1007
Query: 367 TLKSGRLLERVSGCAVC 417
TLK G+ +VS C VC
Sbjct: 1008 TLKGGQERSKVSRCQVC 1024
Score = 62.1 bits (144), Expect = 7e-09
Identities = 34/106 (32%), Positives = 49/106 (46%)
Frame = +1
Query: 100 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 279
HSQ +P CP G ++LW GYS +++ L PGSCL F IPF+ C+
Sbjct: 810 HSQDAQVPMCPQGMAKLWDGYS-LLYVEGQEKAHNQDLGQPGSCLPRFSTIPFLYCSPNE 868
Query: 280 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
+ N S+WL+T + E Q + +S C+VC
Sbjct: 869 VCYYASRNDKSYWLSTTASIPMMPVAEAQ------IQAYISRCSVC 908
>UniRef50_P08572 Cluster: Collagen alpha-2(IV) chain precursor
[Contains: Canstatin]; n=48; Tetrapoda|Rep: Collagen
alpha-2(IV) chain precursor [Contains: Canstatin] - Homo
sapiens (Human)
Length = 1712
Score = 185 bits (450), Expect = 6e-46
Identities = 82/140 (58%), Positives = 94/140 (67%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
P+PMMPV +EI YISRC VCE P+ IAVHSQ + IP CP GW LWIGYSF+MHT
Sbjct: 1572 PLPMMPVAEDEIKPYISRCSVCEAPAIAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAA 1631
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQ 366
L SPGSCLEDFRA PFIECNG GTCH++ANK SFWLTTI + P
Sbjct: 1632 GDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIPEQSFQGSPSAD 1691
Query: 367 TLKSGRLLERVSGCAVCIXN 426
TLK+G + +S C VC+ N
Sbjct: 1692 TLKAGLIRTHISRCQVCMKN 1711
Score = 60.9 bits (141), Expect = 2e-08
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
++ HSQT P CPVG ++LW GYS +++ L GSCL F +PF+ C
Sbjct: 1491 LLVKHSQTDQEPMCPVGMNKLWSGYS-LLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYC 1549
Query: 268 NGEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
N G C++ + N S+WL+T + E + + +S C+VC
Sbjct: 1550 N-PGDVCYYASRNDKSYWLSTTAPLPMMPVAEDE------IKPYISRCSVC 1593
>UniRef50_UPI0000613E3C Cluster: Collagen alpha-2(IV) chain; n=2;
Bos taurus|Rep: Collagen alpha-2(IV) chain - Bos Taurus
Length = 227
Score = 183 bits (446), Expect = 2e-45
Identities = 81/140 (57%), Positives = 93/140 (66%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
P+PMMPV +I YISRC VCE P+ IAVHSQ + IP CP GW LWIGYSF+MHT
Sbjct: 87 PLPMMPVAEEDIRPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAA 146
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQ 366
L SPGSCLEDFRA PFIECNG GTCH++ANK SFWLTTI + P
Sbjct: 147 GDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYYANKYSFWLTTIPEQSFQGTPSAD 206
Query: 367 TLKSGRLLERVSGCAVCIXN 426
TLK+G + +S C VC+ N
Sbjct: 207 TLKAGLIRTHISRCQVCMKN 226
Score = 60.5 bits (140), Expect = 2e-08
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
++ HSQT P CPVG ++LW GYS +++ L GSCL F +PF+ C
Sbjct: 6 LLVKHSQTDKEPMCPVGMNKLWSGYS-LLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYC 64
Query: 268 NGEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
N G C++ + N S+WL+T + E + +S C+VC
Sbjct: 65 N-PGDVCYYASRNDKSYWLSTTAPLPMMPVAEED------IRPYISRCSVC 108
>UniRef50_P29400 Cluster: Collagen alpha-5(IV) chain precursor; n=61;
Eumetazoa|Rep: Collagen alpha-5(IV) chain precursor -
Homo sapiens (Human)
Length = 1685
Score = 180 bits (437), Expect = 2e-44
Identities = 78/141 (55%), Positives = 99/141 (70%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
P+ M P++G I +ISRC VCE P+ VIAVHSQT+ IP CP GW LWIGYSF+MHT
Sbjct: 1546 PMSMQPLKGQSIQPFISRCAVCEAPAVVIAVHSQTIQIPHCPQGWDSLWIGYSFMMHTSA 1605
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQ 366
LASPGSCLE+FR+ PFIEC+G GTC+++AN SFWL T++ S F+ P+ +
Sbjct: 1606 GAEGSGQALASPGSCLEEFRSAPFIECHGR-GTCNYYANSYSFWLATVDVSDMFSKPQSE 1664
Query: 367 TLKSGRLLERVSGCAVCIXNT 429
TLK+G L R+S C VC+ T
Sbjct: 1665 TLKAGDLRTRISRCQVCMKRT 1685
Score = 60.1 bits (139), Expect = 3e-08
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
+I HSQT D P CP G +++ G+S +++ L + GSCL F +PF+ C
Sbjct: 1463 LITRHSQTTDAPQCPQGTLQVYEGFS-LLYVQGNKRAHGQDLGTAGSCLRRFSTMPFMFC 1521
Query: 268 NGEGGTCHHFANKLSFWLTTIEDSQQFAMP-ERQTLKSGRLLERVSGCAVC 417
N N S+WL+T E MP Q LK + +S CAVC
Sbjct: 1522 NINNVCNFASRNDYSYWLSTPE-----PMPMSMQPLKGQSIQPFISRCAVC 1567
>UniRef50_Q07265 Cluster: 3 alpha procollagen; n=4; Strongylocentrotus
purpuratus|Rep: 3 alpha procollagen - Strongylocentrotus
purpuratus (Purple sea urchin)
Length = 1752
Score = 175 bits (425), Expect = 6e-43
Identities = 75/140 (53%), Positives = 100/140 (71%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
P+ M P+ G ++ +ISRCVVCE P+ V+ VHSQT++IP CP W LWIGYSF+MHT
Sbjct: 1613 PMNMAPIRGGQLQPFISRCVVCEAPAQVLTVHSQTVNIPDCPDRWGVLWIGYSFMMHTGP 1672
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQ 366
L+SPGSCLEDFR+ PFIEC+G+ G C+++A +FWL++I + QF MP+ +
Sbjct: 1673 GGEGSGQMLSSPGSCLEDFRSSPFIECHGD-GKCNYYATTYTFWLSSITGNAQFTMPQSE 1731
Query: 367 TLKSGRLLERVSGCAVCIXN 426
TLK+G L RVS CAVC+ N
Sbjct: 1732 TLKAGSLRTRVSRCAVCLRN 1751
Score = 71.3 bits (167), Expect = 1e-11
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Frame = +1
Query: 91 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 270
I HSQT IP CP G +++W GYS ++ L PGSCL+ F +PF+ CN
Sbjct: 1531 ITRHSQTTSIPQCPQGTAKMWHGYS-LLFVQGNERGHGQDLGKPGSCLKRFSTMPFLFCN 1589
Query: 271 GEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
CH + N S+WL+T E P ++ G+L +S C VC
Sbjct: 1590 -INNVCHVASRNDYSYWLSTTEPMPMNMAP----IRGGQLQPFISRCVVC 1634
>UniRef50_P55787 Cluster: Collagen alpha-4(IV) chain; n=46;
Eumetazoa|Rep: Collagen alpha-4(IV) chain - Oryctolagus
cuniculus (Rabbit)
Length = 623
Score = 171 bits (416), Expect = 7e-42
Identities = 77/140 (55%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
P+PMMP+ EI YISRC VCE P+ +AVHSQ IP CP W LWIGYSF+MHT
Sbjct: 481 PLPMMPLSEEEIRPYISRCAVCEAPAQAVAVHSQDQSIPPCPRAWRSLWIGYSFLMHTGA 540
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTI-EDSQQFAMPER 363
L SPGSCLEDFRA PF+EC G GTCH FAN+ SFWLTT+ D Q F+ P
Sbjct: 541 GDQGGGQALMSPGSCLEDFRAAPFLECQGRQGTCHFFANEYSFWLTTVPPDLQVFSAPSP 600
Query: 364 QTLKSGRL-LERVSGCAVCI 420
TLK + +++S C VC+
Sbjct: 601 DTLKESQAQRQKISRCQVCV 620
Score = 58.0 bits (134), Expect = 1e-07
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
++ +HSQT P CP+G LW GYS +++ L GSCL F +PF C
Sbjct: 400 LLVLHSQTDQEPACPMGMPRLWTGYS-LLYLEGQEKAHNQDLGLAGSCLPIFSTLPFAYC 458
Query: 268 NGEGGTCHHF-ANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
N CH+ N S+WL + + E + + +S CAVC
Sbjct: 459 NIH-QVCHYAQRNDKSYWLASAGPLPMMPLSEEE------IRPYISRCAVC 502
>UniRef50_P17139-2 Cluster: Isoform b of P17139 ; n=2; Caenorhabditis
elegans|Rep: Isoform b of P17139 - Caenorhabditis elegans
Length = 1502
Score = 170 bits (414), Expect = 1e-41
Identities = 77/139 (55%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
Frame = +1
Query: 13 PMM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXX 189
PMM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS +W GYSFVMHT
Sbjct: 1364 PMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAG 1423
Query: 190 XXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQT 369
L SPGSCLE+FRA+PFIEC+G GTC+++A FW + ++ +QF P QT
Sbjct: 1424 AEGTGQSLQSPGSCLEEFRAVPFIECHGR-GTCNYYATNHGFWPSIVDQDKQFRKPMSQT 1482
Query: 370 LKSGRLLERVSGCAVCIXN 426
LK+G L +RVS C VC+ N
Sbjct: 1483 LKAGGLKDRVSRCQVCLKN 1501
Score = 71.3 bits (167), Expect = 1e-11
Identities = 42/109 (38%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +1
Query: 94 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 273
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 1282 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN- 1339
Query: 274 EGGTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
CH N SFWL+T E P T + +S CAVC
Sbjct: 1340 MNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT----AIRPYISRCAVC 1384
>UniRef50_Q26640 Cluster: Alpha2(IV)-like collagen; n=4;
Strongylocentrotus purpuratus|Rep: Alpha2(IV)-like
collagen - Strongylocentrotus purpuratus (Purple sea
urchin)
Length = 1747
Score = 169 bits (411), Expect = 3e-41
Identities = 75/138 (54%), Positives = 95/138 (68%)
Frame = +1
Query: 4 QPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTX 183
+P+PMMP+ +I YISRC VCE P+ +A+HSQ+ +IP CP GW LW GYSF M+T
Sbjct: 1608 EPLPMMPLMNQQIDPYISRCTVCEAPTQSLAIHSQSQEIPQCPGGWRSLWTGYSFTMYT- 1666
Query: 184 XXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPER 363
L S GSCLE+FRA PFIECNG G CH F+N+ SFWLT I++ QFA+P +
Sbjct: 1667 AASEGGGQGLESVGSCLENFRATPFIECNGR-GNCHFFSNEYSFWLTVIDEEDQFAIPRK 1725
Query: 364 QTLKSGRLLERVSGCAVC 417
+T+KSG+L VS C VC
Sbjct: 1726 RTIKSGQLQSVVSRCRVC 1743
Score = 63.3 bits (147), Expect = 3e-09
Identities = 38/109 (34%), Positives = 53/109 (48%)
Frame = +1
Query: 91 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 270
I HSQ+ ++P CP G ELW G+S V+ + L GSCL+ F +PF+ CN
Sbjct: 1529 ITRHSQSRNVPSCPAGTVELWRGFS-VLFSMGNGHAHHQDLGDAGSCLQRFSTMPFLFCN 1587
Query: 271 GEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
+ N S+WLTT E MP L + ++ +S C VC
Sbjct: 1588 FNNVCNYASRNDRSYWLTTNEPLPM--MP----LMNQQIDPYISRCTVC 1630
>UniRef50_P53420 Cluster: Collagen alpha-4(IV) chain precursor; n=36;
Euteleostomi|Rep: Collagen alpha-4(IV) chain precursor -
Homo sapiens (Human)
Length = 1690
Score = 167 bits (407), Expect = 9e-41
Identities = 75/140 (53%), Positives = 90/140 (64%), Gaps = 2/140 (1%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
P+PMMP+ I Y+SRC VCE P+ +AVHSQ IP CP W LWIGYSF+MHT
Sbjct: 1548 PLPMMPLSEEAIRPYVSRCAVCEAPAQAVAVHSQDQSIPPCPQTWRSLWIGYSFLMHTGA 1607
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQF-AMPER 363
L SPGSCLEDFRA PF+EC G GTCH FANK SFWLTT++ QF + P
Sbjct: 1608 GDQGGGQALMSPGSCLEDFRAAPFLECQGRQGTCHFFANKYSFWLTTVKADLQFSSAPAP 1667
Query: 364 QTLKSGRL-LERVSGCAVCI 420
TLK + +++S C VC+
Sbjct: 1668 DTLKESQAQRQKISRCQVCV 1687
Score = 56.8 bits (131), Expect = 3e-07
Identities = 38/111 (34%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
++ +HSQT P CP+G LW GYS +++ L GSCL F +PF C
Sbjct: 1467 LLVLHSQTDQEPTCPLGMPRLWTGYS-LLYLEGQEKAHNQDLGLAGSCLPVFSTLPFAYC 1525
Query: 268 NGEGGTCHHF-ANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
N CH+ N S+WL + MP L + VS CAVC
Sbjct: 1526 NIH-QVCHYAQRNDRSYWLASAAPLPM--MP----LSEEAIRPYVSRCAVC 1569
>UniRef50_Q4S0I4 Cluster: Chromosome 2 SCAF14781, whole genome shotgun
sequence; n=5; Euteleostomi|Rep: Chromosome 2 SCAF14781,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1468
Score = 165 bits (402), Expect = 4e-40
Identities = 72/109 (66%), Positives = 81/109 (74%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
P+PMMPVE EI YISRC VCE PS IAVHSQ + IP CPVGW LWIGYSF+MHT
Sbjct: 1359 PLPMMPVEDVEIKPYISRCSVCEAPSVAIAVHSQDITIPQCPVGWRSLWIGYSFLMHTAA 1418
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIE 333
L+SPGSCLEDFR PFIECNG GTCH+FANK SFWL++++
Sbjct: 1419 GNEGGGQSLSSPGSCLEDFRTTPFIECNGAKGTCHYFANKHSFWLSSVD 1467
Score = 63.3 bits (147), Expect = 3e-09
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
++ HSQT IP CPVG ++LW GYS +++ L GSCL F +PF+ C
Sbjct: 1278 LLVKHSQTEQIPMCPVGMAKLWSGYS-LLYMEGQEKAHNQDLGLAGSCLPRFSTMPFLYC 1336
Query: 268 NGEGGTCHHFA-NKLSFWLTT 327
N G C++ + N S+WL+T
Sbjct: 1337 N-PGDICYYASRNDKSYWLST 1356
>UniRef50_UPI00015B49AB Cluster: PREDICTED: similar to alpha-5 type IV
collagen; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to alpha-5 type IV collagen - Nasonia vitripennis
Length = 1702
Score = 164 bits (398), Expect = 1e-39
Identities = 72/138 (52%), Positives = 95/138 (68%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
P+ M P+ E+ YISRC VCE P+ +I +HSQ++ IP CP GW ELW GYSF+MH
Sbjct: 1459 PMSMTPIPSREVGAYISRCSVCEAPTRLIVMHSQSMAIPECPGGWEELWAGYSFLMHRDA 1518
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQ 366
L+SPGSCLE+FRA PFIEC G+ GTC+ F+ +S+W+ TI+D +QF P++Q
Sbjct: 1519 GAAGGGQPLSSPGSCLEEFRARPFIECRGQ-GTCNFFSTAVSYWMATIKDYEQFRKPQQQ 1577
Query: 367 TLKSGRLLERVSGCAVCI 420
TLK+ RVS C+VCI
Sbjct: 1578 TLKTDH-TSRVSRCSVCI 1594
Score = 58.0 bits (134), Expect = 1e-07
Identities = 34/108 (31%), Positives = 51/108 (47%)
Frame = +1
Query: 94 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 273
A HSQ+ IP CP ++W G+S ++H L +PGSCL+ F +PF CN
Sbjct: 1378 ARHSQSAMIPVCPRNTVKMWDGFS-LLHVMGNSYAHAQDLGTPGSCLKKFSVMPFNVCNL 1436
Query: 274 EGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
+ N S+WL++ E P + S + +S C+VC
Sbjct: 1437 NNVCDYANRNDYSYWLSSNEQMPMSMTP----IPSREVGAYISRCSVC 1480
>UniRef50_Q4SZ69 Cluster: Chromosome undetermined SCAF11805, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF11805,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 471
Score = 99 bits (238), Expect(2) = 3e-39
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +1
Query: 175 HTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAM 354
HT LASPGSCLE+FR+ PFIEC+G G TC+++ N SFWL T+E S+ F
Sbjct: 388 HTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG-TCNYYGNSYSFWLATVEPSEMFRK 446
Query: 355 PERQTLKSGRLLERVSGCAVCIXNT 429
P+ +TLK+G L RVS C VC+ T
Sbjct: 447 PQSETLKAGNLQTRVSRCVVCMKRT 471
Score = 84.2 bits (199), Expect(2) = 3e-39
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVM 174
P+ M P+ G I +ISRC VCE P+ VIAVHSQT+ IP CP W LWIGYSF+M
Sbjct: 292 PMSMAPITGESIKPFISRCAVCEAPAMVIAVHSQTIQIPTCPANWEALWIGYSFMM 347
Score = 56.4 bits (130), Expect = 3e-07
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
+I HSQ D+P CP G + ++ GYS +++ L + GSCL F +PF+ C
Sbjct: 209 LITRHSQAQDVPYCPDGTNLIYDGYS-LLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFC 267
Query: 268 NGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLER-VSGCAVC 417
N N S+WL+T E MP +G ++ +S CAVC
Sbjct: 268 NINNVCNFASRNDYSYWLSTPE-----PMPMSMAPITGESIKPFISRCAVC 313
>UniRef50_Q28084 Cluster: Collagen alpha-3(IV) chain; n=13; cellular
organisms|Rep: Collagen alpha-3(IV) chain - Bos taurus
(Bovine)
Length = 471
Score = 159 bits (385), Expect = 4e-38
Identities = 70/138 (50%), Positives = 90/138 (65%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
P+ M P+ G + YISRC VCE P+ IAVHSQT DIP CP GW LW G+SF+M T
Sbjct: 331 PMDMAPITGRALEPYISRCTVCEGPAIAIAVHSQTTDIPPCPAGWISLWKGFSFIMFTSA 390
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQ 366
LASPGSCLE+FRA PFIEC+G GTC++++N SFWL +++ + F P
Sbjct: 391 GSEGAGQALASPGSCLEEFRASPFIECHGR-GTCNYYSNSYSFWLASLDPKRMFRKPIPS 449
Query: 367 TLKSGRLLERVSGCAVCI 420
T+K+G L +S C VC+
Sbjct: 450 TVKAGELENIISRCQVCM 467
Score = 55.2 bits (127), Expect = 8e-07
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
V HSQT IP CP G L+ G+S ++ L + GSCL+ F +PF+ C
Sbjct: 248 VFTRHSQTTAIPSCPEGTEPLYSGFS-LLFVQGNEQAHGQDLGTLGSCLQRFTTMPFLFC 306
Query: 268 NGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLE-RVSGCAVC 417
N N S+WL+T +P +GR LE +S C VC
Sbjct: 307 NINDVCNFASRNDYSYWLST-----PAMIPMDMAPITGRALEPYISRCTVC 352
>UniRef50_Q9VMV5 Cluster: CG16858-PA; n=6; Schizophora|Rep: CG16858-PA
- Drosophila melanogaster (Fruit fly)
Length = 1940
Score = 158 bits (383), Expect = 7e-38
Identities = 68/137 (49%), Positives = 91/137 (66%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
P+ M P++G +++KYISRCVVCE + +IA+HSQ++ IP CP GW E+W GYS+ M T
Sbjct: 1600 PMTMTPIQGRDLMKYISRCVVCETTTRIIALHSQSMSIPDCPGGWEEMWTGYSYFMSTLD 1659
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQ 366
L SPGSCLE+FRA P IEC+G G C+++ SFWLT IE+ QF P +Q
Sbjct: 1660 NVGGVGQNLVSPGSCLEEFRAQPVIECHGH-GRCNYYDALASFWLTVIEEQDQFVQPRQQ 1718
Query: 367 TLKSGRLLERVSGCAVC 417
TLK+ ++S C VC
Sbjct: 1719 TLKAD-FTSKISRCTVC 1734
Score = 56.4 bits (130), Expect = 3e-07
Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
+ A HSQ++ +P CP + LW GYS + L GSC+ F +P++ C
Sbjct: 1517 IFARHSQSVHVPQCPANTNLLWEGYS-LSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLC 1575
Query: 268 NGEGGTCHHFA--NKLSFWLTTIEDSQQFAMPERQTLKSGR-LLERVSGCAVCIXNT 429
+ C HFA N S WL+T E MP T GR L++ +S C VC T
Sbjct: 1576 D-ITNVC-HFAQNNDDSLWLSTAE-----PMPMTMTPIQGRDLMKYISRCVVCETTT 1625
>UniRef50_Q01955 Cluster: Collagen alpha-3(IV) chain precursor
(Goodpasture antigen) [Contains: Tumstatin]; n=61;
Eumetazoa|Rep: Collagen alpha-3(IV) chain precursor
(Goodpasture antigen) [Contains: Tumstatin] - Homo
sapiens (Human)
Length = 1670
Score = 156 bits (378), Expect = 3e-37
Identities = 69/138 (50%), Positives = 90/138 (65%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
P+ M P+ G + YISRC VCE P+ IAVHSQT DIP CP GW LW G+SF+M T
Sbjct: 1530 PMNMAPITGRALEPYISRCTVCEGPAIAIAVHSQTTDIPPCPHGWISLWKGFSFIMFTSA 1589
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQ 366
LASPGSCLE+FRA PF+EC+G GTC++++N SFWL ++ + F P
Sbjct: 1590 GSEGTGQALASPGSCLEEFRASPFLECHGR-GTCNYYSNSYSFWLASLNPERMFRKPIPS 1648
Query: 367 TLKSGRLLERVSGCAVCI 420
T+K+G L + +S C VC+
Sbjct: 1649 TVKAGELEKIISRCQVCM 1666
Score = 59.3 bits (137), Expect = 5e-08
Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
V HSQT IP CP G L+ G+SF + L + GSCL+ F +PF+ C
Sbjct: 1447 VFTRHSQTTAIPSCPEGTVPLYSGFSF-LFVQGNQRAHGQDLGTLGSCLQRFTTMPFLFC 1505
Query: 268 NGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLE-RVSGCAVC 417
N N S+WL+T MP +GR LE +S C VC
Sbjct: 1506 NVNDVCNFASRNDYSYWLST-----PALMPMNMAPITGRALEPYISRCTVC 1551
>UniRef50_UPI000065E567 Cluster: Homolog of Brachydanio rerio
"Collagen, type I, alpha 3.; n=1; Takifugu rubripes|Rep:
Homolog of Brachydanio rerio "Collagen, type I, alpha 3.
- Takifugu rubripes
Length = 1426
Score = 153 bits (372), Expect = 2e-36
Identities = 70/139 (50%), Positives = 85/139 (61%), Gaps = 1/139 (0%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
PIPMMPV G EI +ISRCVVCE S + HSQ P CP GW LW GYSF+MHT
Sbjct: 1287 PIPMMPVFGQEISSHISRCVVCETVSPAVVFHSQEHTAPACPQGWRSLWTGYSFLMHTGA 1346
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQ 366
L S GSCL++F+ P IEC G G+CH+F+N SFWLTTI ++QF P
Sbjct: 1347 GDEGSGQALTSSGSCLKNFQTHPIIECQGPQGSCHYFSNLYSFWLTTISPTEQFKAPRPG 1406
Query: 367 TLKS-GRLLERVSGCAVCI 420
T+K+ R + S C VC+
Sbjct: 1407 TIKAPDRQRSKTSQCHVCL 1425
Score = 61.3 bits (142), Expect = 1e-08
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 79 PSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPF 258
P ++ +HSQ++ +P CP G S LW+GYS + + L GSCL F +PF
Sbjct: 1204 PGFLLVIHSQSVQVPKCPDGSSLLWVGYS-LAYLKGQKNAHAQDLGQAGSCLRVFSTMPF 1262
Query: 259 IECNGEGGTCHHFA-NKLSFWLTT 327
CN CH + N S+WL+T
Sbjct: 1263 SYCN--KAACHFSSRNDKSYWLST 1284
>UniRef50_Q58FS7 Cluster: Type IV collagen alpha 3 chain; n=2; Danio
rerio|Rep: Type IV collagen alpha 3 chain - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 244
Score = 151 bits (366), Expect = 8e-36
Identities = 72/140 (51%), Positives = 92/140 (65%), Gaps = 4/140 (2%)
Frame = +1
Query: 13 PMMPVE---GNEIVK-YISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHT 180
PM+P + EI+K YISRC VCE +NVIA+HSQT++IP CPVGW LW GYSFVM T
Sbjct: 100 PMLPDQQMMSGEILKWYISRCSVCEAIANVIAIHSQTINIPQCPVGWLSLWEGYSFVMQT 159
Query: 181 XXXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPE 360
L SPGSCLE FR IPFIEC+G GTC+ + + S+WL +++ + F+MP
Sbjct: 160 GVGAEGSGQPLVSPGSCLEQFRKIPFIECHGR-GTCNFYPDSYSYWLASLDHTNMFSMPN 218
Query: 361 RQTLKSGRLLERVSGCAVCI 420
RQT K ++ R C VC+
Sbjct: 219 RQTAKQKEIISR---CQVCM 235
Score = 62.5 bits (145), Expect = 5e-09
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +1
Query: 100 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 279
HSQT IP CP G L+ GYS ++ L + GSCL F +PF+ CN +
Sbjct: 23 HSQTTVIPECPAGSKRLYTGYS-LLFINGNNRGHGQDLGTLGSCLPMFNTMPFMVCNRD- 80
Query: 280 GTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLE-RVSGCAVC 417
TC + + N S+WL+T D+ +P++Q + SG +L+ +S C+VC
Sbjct: 81 ETCRYASRNDYSYWLST--DTPM--LPDQQ-MMSGEILKWYISRCSVC 123
>UniRef50_Q7PVR6 Cluster: ENSANGP00000016652; n=3;
Endopterygota|Rep: ENSANGP00000016652 - Anopheles
gambiae str. PEST
Length = 461
Score = 150 bits (364), Expect = 1e-35
Identities = 66/137 (48%), Positives = 90/137 (65%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
P+ M P+ +++ +YISRC VCE + V+A+HSQ++ IP CP GW ELW+GYS+ MHT
Sbjct: 269 PMSMAPIPADQVERYISRCSVCESNTRVMALHSQSMSIPDCPEGWEELWLGYSYAMHTSD 328
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQ 366
SPGSC+E+FR P IEC+G GTC+ + SFWLT I+D+ QF P+ Q
Sbjct: 329 NSGGFGQDFVSPGSCMEEFRPQPVIECHGH-GTCNFYDGISSFWLTIIDDAMQFNRPQPQ 387
Query: 367 TLKSGRLLERVSGCAVC 417
TLK+ + +VS C VC
Sbjct: 388 TLKAHQ-TSKVSRCIVC 403
Score = 58.4 bits (135), Expect = 8e-08
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
+ A HSQ + IP CP+ +LW GYS V + L + GSCL F +PF+ C
Sbjct: 186 LFARHSQKVTIPECPINTYKLWDGYSLV-NVIASSRSVGQDLGAAGSCLRRFSTMPFMFC 244
Query: 268 NGEGGTCHHFANK-LSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVCIXNT 429
+ C++ +N + WL T E P + + ++ +S C+VC NT
Sbjct: 245 D-INNVCNYASNNDDTIWLATPEPMPMSMAP----IPADQVERYISRCSVCESNT 294
>UniRef50_UPI000065E566 Cluster: Homolog of Homo sapiens "Splice
Isoform 1 of Collagen alpha 3; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens "Splice Isoform 1
of Collagen alpha 3 - Takifugu rubripes
Length = 1258
Score = 148 bits (358), Expect = 8e-35
Identities = 67/138 (48%), Positives = 84/138 (60%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
P M+ + G+ + YISRC VCE SNVIAVHSQT IP CP W LW GYSFVM T
Sbjct: 1122 PENMVSITGDMLASYISRCAVCETTSNVIAVHSQTTQIPDCPQDWVSLWSGYSFVMQTGI 1181
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQ 366
L SPGSCLE FR +PFIEC+G GTC+++ + SFW+ +++ F P Q
Sbjct: 1182 GADGSSQPLISPGSCLETFRKVPFIECHGR-GTCNYYPDSYSFWMASLDPKNMFGKPIPQ 1240
Query: 367 TLKSGRLLERVSGCAVCI 420
T+K L +S C VC+
Sbjct: 1241 TVKEPSLQSILSRCRVCM 1258
Score = 72.9 bits (171), Expect = 4e-12
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFV-MHTXXXXXXXXXXLASPGSCLEDFRAIPFIE 264
+IA HSQ++ IP CP G S L+ GYSF+ MH L +PGSCL F +PF+
Sbjct: 1039 MIARHSQSIHIPVCPCGTSLLFSGYSFLFMHANDRVHGQD--LGTPGSCLPHFSTMPFLV 1096
Query: 265 CNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLL-ERVSGCAVC 417
C+ E + N S+WL+T + A+PE +G +L +S CAVC
Sbjct: 1097 CDTESNCRYASRNDYSYWLSTGK-----ALPENMVSITGDMLASYISRCAVC 1143
>UniRef50_Q9GQB1 Cluster: Type IV collagen alpha 1 chain precursor;
n=1; Hydra vulgaris|Rep: Type IV collagen alpha 1 chain
precursor - Hydra attenuata (Hydra) (Hydra vulgaris)
Length = 1723
Score = 141 bits (342), Expect = 7e-33
Identities = 66/133 (49%), Positives = 87/133 (65%)
Frame = +1
Query: 22 PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXX 201
P G ++ YISRC+VCE PS+V+AVHSQ+ P CP GW LW G+SF+M+
Sbjct: 1589 PSSGADLENYISRCIVCEAPSHVLAVHSQSELDPKCPDGWENLWTGFSFLMYNSAGAQGS 1648
Query: 202 XXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSG 381
L+S GSCLEDFR P+IEC+G GTC ++ LSFWL+TI +S F +P+ + L+
Sbjct: 1649 GQLLSSSGSCLEDFRVNPYIECHGR-GTCWYYGPTLSFWLSTIGESNMFQVPKFEILER- 1706
Query: 382 RLLERVSGCAVCI 420
L RVS CAVC+
Sbjct: 1707 NLKARVSRCAVCM 1719
Score = 66.9 bits (156), Expect = 2e-10
Identities = 35/106 (33%), Positives = 49/106 (46%)
Frame = +1
Query: 100 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 279
HSQ++ +P CP G +W GYSF ++ L PGSCL+ F +PF+ C+ +
Sbjct: 1507 HSQSIKVPSCPAGMQTMWEGYSF-LYAQGNERAFGQDLGQPGSCLKRFSTMPFLFCDIQN 1565
Query: 280 GTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
N SFWL+T E P+ L +S C VC
Sbjct: 1566 KCVVASRNDYSFWLSTAE------KPKEAPSSGADLENYISRCIVC 1605
>UniRef50_UPI00006608B5 Cluster: Homolog of Homo sapiens "Tumstatin;
n=1; Takifugu rubripes|Rep: Homolog of Homo sapiens
"Tumstatin - Takifugu rubripes
Length = 1374
Score = 138 bits (335), Expect = 5e-32
Identities = 64/135 (47%), Positives = 83/135 (61%), Gaps = 1/135 (0%)
Frame = +1
Query: 19 MP-VEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXX 195
MP + G+ + YISRC VCE +NVIA+HSQT +P CP+GW LW+GYSFVM T
Sbjct: 1239 MPLISGDLLRSYISRCSVCETRTNVIAIHSQTSVVPDCPLGWLPLWVGYSFVMETGVGAE 1298
Query: 196 XXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLK 375
LASPGSCLE FR IPFIEC+G GTC+++ + S+WL + F+ P+ T
Sbjct: 1299 GSGQPLASPGSCLEQFRKIPFIECHGR-GTCNYYTDSYSYWLAALSPHDMFSKPKPHTDT 1357
Query: 376 SGRLLERVSGCAVCI 420
+S C VC+
Sbjct: 1358 GEFPGSLISRCRVCM 1372
Score = 64.1 bits (149), Expect = 2e-09
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +1
Query: 100 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 279
HSQ L IP CPVG +E++ GYS ++ L + GSCL F +PF+ CN +
Sbjct: 1157 HSQELSIPECPVGSTEVYSGYS-LLFINGNNRAHGQDLGTLGSCLPRFTTMPFLFCNTD- 1214
Query: 280 GTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVCIXNT 429
TC + + N S+WL+T Q + + L +S C+VC T
Sbjct: 1215 STCRYASRNDYSYWLST----NQVVLSNMPLISGDLLRSYISRCSVCETRT 1261
>UniRef50_UPI00015A592A Cluster: Type IV collagen alpha 4 chain; n=3;
Danio rerio|Rep: Type IV collagen alpha 4 chain - Danio
rerio
Length = 1639
Score = 131 bits (316), Expect = 1e-29
Identities = 61/141 (43%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
PIP P++G +I ++ISRCVVCE P+ IA+HSQ P CP W LW G+SF+M+T
Sbjct: 1499 PIPNKPLKGQDIEEHISRCVVCEAPTPTIAIHSQDRLDPVCPPKWRSLWTGFSFMMYTGS 1558
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQ 366
L S GSCL+DFR+ PF+EC G GTC +FA+ SFW+ TI+ + P
Sbjct: 1559 GDEGGGQSLTSTGSCLQDFRSQPFVECQGPRGTCSYFASIYSFWM-TIDMEHNDSSPHGP 1617
Query: 367 TLKSGR-LLERVSGCAVCIXN 426
+ R + S C++C+ N
Sbjct: 1618 VITEERQQRDSTSRCSICMMN 1638
Score = 61.3 bits (142), Expect = 1e-08
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
++ +HSQ+ +P CP G ++LW GYS +++ L GSCL F +PF C
Sbjct: 1419 LLVMHSQSRYVPTCPAGLTQLWNGYS-LLYLEGQERAHTQDLGQAGSCLPVFSTMPFSCC 1477
Query: 268 NGEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
N + TC + + N S+WL+T +P + LK + E +S C VC
Sbjct: 1478 NMD--TCDYASRNDKSYWLST-----NAPIPNK-PLKGQDIEEHISRCVVC 1520
>UniRef50_Q4TZW9 Cluster: Type IV collagen alpha 4 chain; n=3; Danio
rerio|Rep: Type IV collagen alpha 4 chain - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 240
Score = 131 bits (316), Expect = 1e-29
Identities = 61/141 (43%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
PIP P++G +I ++ISRCVVCE P+ IA+HSQ P CP W LW G+SF+M+T
Sbjct: 97 PIPNKPLKGQDIEEHISRCVVCEAPTPTIAIHSQDRLDPVCPPKWRNLWTGFSFMMYTGS 156
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQ 366
L S GSCL+DFR+ PF+EC G GTC +FA+ SFW+ TI+ + P
Sbjct: 157 GDEGGGQSLTSTGSCLQDFRSQPFVECQGPRGTCSYFASIYSFWM-TIDMEHNDSSPHGP 215
Query: 367 TLKSGR-LLERVSGCAVCIXN 426
+ R + S C++C+ N
Sbjct: 216 VITEERQQRDSTSRCSICMMN 236
Score = 61.3 bits (142), Expect = 1e-08
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
++ +HSQ+ +P CP G ++LW GYS +++ L GSCL F +PF C
Sbjct: 17 LLVMHSQSRYVPTCPAGLTQLWNGYS-LLYLEGQERAHTQDLGQAGSCLPVFSTMPFSCC 75
Query: 268 NGEGGTCHHFA-NKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
N + TC + + N S+WL+T +P + LK + E +S C VC
Sbjct: 76 NMD--TCDYASRNDKSYWLST-----NAPIPNK-PLKGQDIEEHISRCVVC 118
>UniRef50_Q5C3P1 Cluster: SJCHGC06113 protein; n=2;
Platyhelminthes|Rep: SJCHGC06113 protein - Schistosoma
japonicum (Blood fluke)
Length = 587
Score = 111 bits (268), Expect = 6e-24
Identities = 56/141 (39%), Positives = 78/141 (55%), Gaps = 3/141 (2%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXX 186
P P+ N+ I+RCVVCE PS+V A HSQ + CP W+ELW G S ++HT
Sbjct: 444 PRSEQPIPVNQTADQIARCVVCEAPSHVFAFHSQGETLQPCPSTWTELWTGVSLILHT-S 502
Query: 187 XXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDS-QQFAMPER 363
L+SPGSC+E FR P IECN G CH++++ ++L + + QF P
Sbjct: 503 GAHGGGQQLSSPGSCMEHFRYSPVIECNNNVGMCHYWSDAKVYYLRALNPNITQFEKPVG 562
Query: 364 QTLKS--GRLLERVSGCAVCI 420
+K+ G +L VS C VC+
Sbjct: 563 FVMKAAEGPVLNNVSKCRVCM 583
Score = 51.2 bits (117), Expect = 1e-05
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = +1
Query: 82 SNVIAVHSQTLDIPG--CPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIP 255
S + A H QT + CP G ++L+ GYS+VM L +P SCL F ++P
Sbjct: 359 SILFARHYQTPFVENLTCPGGTNKLFTGYSYVMG-GGVDDLVSMDLGTPSSCLSKFSSLP 417
Query: 256 FIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
+C + ++ S+WL T+ + +P QT ++++ C VC
Sbjct: 418 MTQCERDTTCQSSMRHERSYWLATLVPRSEQPIPVNQT------ADQIARCVVC 465
>UniRef50_O09238 Cluster: Collagen type IV; n=2; Pseudocorticium
jarrei|Rep: Collagen type IV - Pseudocorticium jarrei
Length = 854
Score = 111 bits (268), Expect = 6e-24
Identities = 55/135 (40%), Positives = 75/135 (55%)
Frame = +1
Query: 13 PMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXX 192
P +PV G++I ++ISRC VCE S IAVHSQ ++P C GW LW G+SF+ T
Sbjct: 714 PPIPVSGSDIEEHISRCSVCESNSISIAVHSQDSNVPDCFPGWVTLWTGFSFLQQTAAQA 773
Query: 193 XXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTL 372
L SPGSCL+ FR+ PFI C G G C + + S+W+ ++ F E T
Sbjct: 774 EGTGQGLESPGSCLQHFRSTPFIGCGGR-GQCSYDSVSGSYWMIVLDALNPFQDTEPGTY 832
Query: 373 KSGRLLERVSGCAVC 417
+ +R+S C VC
Sbjct: 833 PVSDIEKRLSRCRVC 847
Score = 63.3 bits (147), Expect = 3e-09
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
++ VHSQT +IP CP ++ LW+GYS + T L PGSC+ F +P + C
Sbjct: 631 LLVVHSQTTNIPQCPNDYTRLWVGYSLLQLT-GNGLGVGQDLGDPGSCMPSFHPMPVVRC 689
Query: 268 NGEGGTCHHFANK-LSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVCIXNT 429
N C K S+WL+T ++ + +P + + E +S C+VC N+
Sbjct: 690 N-PMQRCEFARRKDESYWLST--NATRPPIP----VSGSDIEEHISRCSVCESNS 737
>UniRef50_UPI0000DBF028 Cluster: UPI0000DBF028 related cluster; n=9;
Rattus norvegicus|Rep: UPI0000DBF028 UniRef100 entry -
Rattus norvegicus
Length = 1549
Score = 85.0 bits (201), Expect = 8e-16
Identities = 37/56 (66%), Positives = 42/56 (75%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVM 174
PIPMMPV +I +YISRC VCE PS IAVHSQ +P CP+GW LWIGYSF+M
Sbjct: 1495 PIPMMPVGETQIPQYISRCSVCEAPSQAIAVHSQD-TVPQCPLGWHSLWIGYSFLM 1549
Score = 65.3 bits (152), Expect = 7e-10
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Frame = +1
Query: 100 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 279
HSQ+ +P CP+G S+LW+GYS ++ L GSCL F +PFI CN
Sbjct: 1418 HSQSEHVPPCPIGMSQLWVGYS-LLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCN-IN 1475
Query: 280 GTCHHF-ANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
CH+ N S+WL+T MP +T ++ + +S C+VC
Sbjct: 1476 EVCHYARRNDKSYWLSTTAPIPM--MPVGET----QIPQYISRCSVC 1516
>UniRef50_UPI0000DA44CD Cluster: PREDICTED: similar to procollagen,
type IV, alpha 6; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to procollagen, type IV, alpha 6 - Rattus
norvegicus
Length = 1405
Score = 65.3 bits (152), Expect = 7e-10
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Frame = +1
Query: 100 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 279
HSQ+ +P CP+G S+LW+GYS ++ L GSCL F +PFI CN
Sbjct: 1254 HSQSEHVPPCPIGMSQLWVGYS-LLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCN-IN 1311
Query: 280 GTCHHF-ANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
CH+ N S+WL+T MP +T ++ + +S C+VC
Sbjct: 1312 EVCHYARRNDKSYWLSTTAPIPM--MPVGET----QIPQYISRCSVC 1352
Score = 54.8 bits (126), Expect = 1e-06
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +1
Query: 7 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 147
PIPMMPV +I +YISRC VCE PS IAVHSQ P G ++
Sbjct: 1331 PIPMMPVGETQIPQYISRCSVCEAPSQAIAVHSQDNHRSTVPFGLAQ 1377
>UniRef50_Q5BYE6 Cluster: SJCHGC08138 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08138 protein - Schistosoma
japonicum (Blood fluke)
Length = 206
Score = 56.0 bits (129), Expect = 4e-07
Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
+ VHSQ P CP+ + ++ GYS V L +PGSCL F +PF C
Sbjct: 95 LFTVHSQDSQPPSCPIYTTPVYTGYSLVT-LQGDDDSTTMDLGTPGSCLRKFSIMPFANC 153
Query: 268 NGE-GGTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVCIXNT 429
+ G C + N S+WL+T+E Q P R + +S C VC T
Sbjct: 154 FAKVNGNCQINMRNGRSYWLSTLE--QYMLSPARVE----NIKPYISRCIVCQSRT 203
>UniRef50_Q4SB07 Cluster: Chromosome undetermined SCAF14677, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14677,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 856
Score = 54.0 bits (124), Expect = 2e-06
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 100 HSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEG 279
HSQ L IP CP G ++++ GYS ++ L + GSCL F +PF+ CN +
Sbjct: 741 HSQELYIPECPAGSTQVYSGYS-LLFINGNNRAHGQDLGTLGSCLPRFTTMPFLFCNTD- 798
Query: 280 GTCHHFA-NKLSFWLTT 327
TC + + N S+WL+T
Sbjct: 799 RTCRYASRNDYSYWLST 815
>UniRef50_A7T795 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 331
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +1
Query: 91 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 270
I HSQT P CP + +LW GYS +++ L GSCL+ F +P++ CN
Sbjct: 259 IVKHSQTTTPPECPPTYDKLWDGYS-LLYVQGHDVSHGQDLGQAGSCLKRFTTMPYLYCN 317
>UniRef50_A7T3G2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 590
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +1
Query: 91 IAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECN 270
I HSQT P CP + +LW GYS +++ L GSCL+ F +P++ CN
Sbjct: 478 IVKHSQTTTPPECPPTYDKLWDGYS-LLYVQGHDVSHGQDLGQAGSCLKRFTTMPYLYCN 536
>UniRef50_A1ZSZ5 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 256
Score = 32.7 bits (71), Expect = 4.7
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = -1
Query: 395 RSRRRPDLSVCRSGIANCWL--SSMVVSQKLSLFAK*WQVPPSPLHSI 258
+ RRR L R+G+ WL + +V+Q L L W+ PP+PLHSI
Sbjct: 31 KPRRRRQL--LRTGVFLLWLFTNPFIVNQALLL----WEAPPTPLHSI 72
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,836,419
Number of Sequences: 1657284
Number of extensions: 10074462
Number of successful extensions: 21053
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 20441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20999
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -