Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_L22
(497 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 212 1e-55
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 212 1e-55
J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV) co... 212 1e-55
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 209 1e-54
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 209 1e-54
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 209 1e-54
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 175 1e-44
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 175 1e-44
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 172 1e-43
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 172 1e-43
U14635-13|AAC46654.2| 322|Caenorhabditis elegans Hypothetical p... 28 4.3
Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z49132-11|CAA88991.1| 400|Caenorhabditis elegans Hypothetical p... 27 10.0
Z48585-11|CAA88487.1| 400|Caenorhabditis elegans Hypothetical p... 27 10.0
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 212 bits (517), Expect = 1e-55
Identities = 92/142 (64%), Positives = 104/142 (73%)
Frame = +1
Query: 4 QPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTX 183
+ IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LWIGYSF MHT
Sbjct: 1613 EAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLWIGYSFAMHTG 1672
Query: 184 XXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPER 363
L+SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI++ +F +PE
Sbjct: 1673 AGAEGGGQSLSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTIDNDSEFKVPES 1732
Query: 364 QTLKSGRLLERVSGCAVCIXNT 429
QTLKSG L RVS C VC+ +T
Sbjct: 1733 QTLKSGNLRTRVSRCQVCVKST 1754
Score = 65.7 bits (153), Expect = 2e-11
Identities = 36/110 (32%), Positives = 55/110 (50%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 1533 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1591
Query: 268 NGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
+ + N S+WL+T E + ER+ + +S CAVC
Sbjct: 1592 DFNNVCNYASRNDKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 1635
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 212 bits (517), Expect = 1e-55
Identities = 92/142 (64%), Positives = 104/142 (73%)
Frame = +1
Query: 4 QPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTX 183
+ IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LWIGYSF MHT
Sbjct: 1614 EAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLWIGYSFAMHTG 1673
Query: 184 XXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPER 363
L+SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI++ +F +PE
Sbjct: 1674 AGAEGGGQSLSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTIDNDSEFKVPES 1733
Query: 364 QTLKSGRLLERVSGCAVCIXNT 429
QTLKSG L RVS C VC+ +T
Sbjct: 1734 QTLKSGNLRTRVSRCQVCVKST 1755
Score = 65.7 bits (153), Expect = 2e-11
Identities = 36/110 (32%), Positives = 55/110 (50%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 1534 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1592
Query: 268 NGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
+ + N S+WL+T E + ER+ + +S CAVC
Sbjct: 1593 DFNNVCNYASRNDKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 1636
>J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV)
collagen protein.
Length = 261
Score = 212 bits (517), Expect = 1e-55
Identities = 92/142 (64%), Positives = 104/142 (73%)
Frame = +1
Query: 4 QPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTX 183
+ IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LWIGYSF MHT
Sbjct: 116 EAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLWIGYSFAMHTG 175
Query: 184 XXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPER 363
L+SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI++ +F +PE
Sbjct: 176 AGAEGGGQSLSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTIDNDSEFKVPES 235
Query: 364 QTLKSGRLLERVSGCAVCIXNT 429
QTLKSG L RVS C VC+ +T
Sbjct: 236 QTLKSGNLRTRVSRCQVCVKST 257
Score = 66.5 bits (155), Expect = 1e-11
Identities = 36/110 (32%), Positives = 56/110 (50%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 36 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 94
Query: 268 NGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
+ + N+ S+WL+T E + ER+ + +S CAVC
Sbjct: 95 DFNNVCNYASRNEKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 138
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 209 bits (510), Expect = 1e-54
Identities = 91/142 (64%), Positives = 103/142 (72%)
Frame = +1
Query: 4 QPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTX 183
+ IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LWIGYSF MHT
Sbjct: 1614 EAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLWIGYSFAMHTG 1673
Query: 184 XXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPER 363
+SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI++ +F +PE
Sbjct: 1674 AGAEGGGQSPSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTIDNDSEFKVPES 1733
Query: 364 QTLKSGRLLERVSGCAVCIXNT 429
QTLKSG L RVS C VC+ +T
Sbjct: 1734 QTLKSGNLRTRVSRCQVCVKST 1755
Score = 66.5 bits (155), Expect = 1e-11
Identities = 36/110 (32%), Positives = 56/110 (50%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 1534 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1592
Query: 268 NGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
+ + N+ S+WL+T E + ER+ + +S CAVC
Sbjct: 1593 DFNNVCNYASRNEKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 1636
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 209 bits (510), Expect = 1e-54
Identities = 91/142 (64%), Positives = 103/142 (72%)
Frame = +1
Query: 4 QPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTX 183
+ IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LWIGYSF MHT
Sbjct: 1613 EAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLWIGYSFAMHTG 1672
Query: 184 XXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPER 363
+SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI++ +F +PE
Sbjct: 1673 AGAEGGGQSPSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTIDNDSEFKVPES 1732
Query: 364 QTLKSGRLLERVSGCAVCIXNT 429
QTLKSG L RVS C VC+ +T
Sbjct: 1733 QTLKSGNLRTRVSRCQVCVKST 1754
Score = 66.5 bits (155), Expect = 1e-11
Identities = 36/110 (32%), Positives = 56/110 (50%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 1533 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1591
Query: 268 NGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
+ + N+ S+WL+T E + ER+ + +S CAVC
Sbjct: 1592 DFNNVCNYASRNEKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 1635
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 209 bits (510), Expect = 1e-54
Identities = 91/142 (64%), Positives = 103/142 (72%)
Frame = +1
Query: 4 QPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTX 183
+ IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LWIGYSF MHT
Sbjct: 1650 EAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLWIGYSFAMHTG 1709
Query: 184 XXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPER 363
+SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI++ +F +PE
Sbjct: 1710 AGAEGGGQSPSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTIDNDSEFKVPES 1769
Query: 364 QTLKSGRLLERVSGCAVCIXNT 429
QTLKSG L RVS C VC+ +T
Sbjct: 1770 QTLKSGNLRTRVSRCQVCVKST 1791
Score = 66.5 bits (155), Expect = 1e-11
Identities = 36/110 (32%), Positives = 56/110 (50%)
Frame = +1
Query: 88 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 267
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 1570 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1628
Query: 268 NGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
+ + N+ S+WL+T E + ER+ + +S CAVC
Sbjct: 1629 DFNNVCNYASRNEKSYWLSTSEAIPMMPVNERE------IEPYISRCAVC 1672
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 175 bits (426), Expect = 1e-44
Identities = 78/139 (56%), Positives = 95/139 (68%), Gaps = 1/139 (0%)
Frame = +1
Query: 13 PMM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXX 189
PMM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS +W GYSFVMHT
Sbjct: 1364 PMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAG 1423
Query: 190 XXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQT 369
L SPGSCLE+FRA+PFIEC+G GTC+++A FWL+ ++ +QF P QT
Sbjct: 1424 AEGTGQSLQSPGSCLEEFRAVPFIECHGR-GTCNYYATNHGFWLSIVDQDKQFRKPMSQT 1482
Query: 370 LKSGRLLERVSGCAVCIXN 426
LK+G L +RVS C VC+ N
Sbjct: 1483 LKAGGLKDRVSRCQVCLKN 1501
Score = 72.1 bits (169), Expect = 2e-13
Identities = 42/109 (38%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +1
Query: 94 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 273
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 1282 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN- 1339
Query: 274 EGGTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
CH N SFWL+T E P T + +S CAVC
Sbjct: 1340 MNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT----AIRPYISRCAVC 1384
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 175 bits (426), Expect = 1e-44
Identities = 78/139 (56%), Positives = 95/139 (68%), Gaps = 1/139 (0%)
Frame = +1
Query: 13 PMM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXX 189
PMM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS +W GYSFVMHT
Sbjct: 1621 PMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAG 1680
Query: 190 XXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQT 369
L SPGSCLE+FRA+PFIEC+G GTC+++A FWL+ ++ +QF P QT
Sbjct: 1681 AEGTGQSLQSPGSCLEEFRAVPFIECHGR-GTCNYYATNHGFWLSIVDQDKQFRKPMSQT 1739
Query: 370 LKSGRLLERVSGCAVCIXN 426
LK+G L +RVS C VC+ N
Sbjct: 1740 LKAGGLKDRVSRCQVCLKN 1758
Score = 72.1 bits (169), Expect = 2e-13
Identities = 42/109 (38%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +1
Query: 94 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 273
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 1539 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN- 1596
Query: 274 EGGTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
CH N SFWL+T E P T + +S CAVC
Sbjct: 1597 MNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT----AIRPYISRCAVC 1641
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 172 bits (419), Expect = 1e-43
Identities = 77/139 (55%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
Frame = +1
Query: 13 PMM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXX 189
PMM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS +W GYSFVMHT
Sbjct: 1620 PMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAG 1679
Query: 190 XXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQT 369
L SPGSCLE+FRA+PFIEC+G GTC+++A FW + ++ +QF P QT
Sbjct: 1680 AEGTGQSLQSPGSCLEEFRAVPFIECHGR-GTCNYYATNHGFWPSIVDQDKQFRKPMSQT 1738
Query: 370 LKSGRLLERVSGCAVCIXN 426
LK+G L +RVS C VC+ N
Sbjct: 1739 LKAGGLKDRVSRCQVCLKN 1757
Score = 72.1 bits (169), Expect = 2e-13
Identities = 42/109 (38%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +1
Query: 94 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 273
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 1538 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN- 1595
Query: 274 EGGTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
CH N SFWL+T E P T + +S CAVC
Sbjct: 1596 MNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT----AIRPYISRCAVC 1640
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 172 bits (419), Expect = 1e-43
Identities = 77/139 (55%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
Frame = +1
Query: 13 PMM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXX 189
PMM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS +W GYSFVMHT
Sbjct: 175 PMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAG 234
Query: 190 XXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTIEDSQQFAMPERQT 369
L SPGSCLE+FRA+PFIEC+G GTC+++A FW + ++ +QF P QT
Sbjct: 235 AEGTGQSLQSPGSCLEEFRAVPFIECHGR-GTCNYYATNHGFWPSIVDQDKQFRKPMSQT 293
Query: 370 LKSGRLLERVSGCAVCIXN 426
LK+G L +RVS C VC+ N
Sbjct: 294 LKAGGLKDRVSRCQVCLKN 312
Score = 72.1 bits (169), Expect = 2e-13
Identities = 42/109 (38%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +1
Query: 94 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 273
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 93 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN- 150
Query: 274 EGGTCH-HFANKLSFWLTTIEDSQQFAMPERQTLKSGRLLERVSGCAVC 417
CH N SFWL+T E P T + +S CAVC
Sbjct: 151 MNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGT----AIRPYISRCAVC 195
>U14635-13|AAC46654.2| 322|Caenorhabditis elegans Hypothetical
protein C27H5.6 protein.
Length = 322
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -3
Query: 387 ETSRLKCLSLWHSKLLAVFDGGQPETEFICKVMASTTFTVTFYKWYRS 244
+TS +C++ + + +F G P T F C + V WYRS
Sbjct: 84 DTSSSQCMTAYLWPVFLLFGGQLPAT-FHCLLTVERVLAVNRVSWYRS 130
>Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical
protein B0365.6 protein.
Length = 545
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 468 IWLLRTLSLFALCGVXDTNCTSGYTF*ETSRLKCLSL 358
+W TL L L V C +G+T TS+ KC+ L
Sbjct: 1 MWFHSTLLLAILVAVSADTCPAGFTALSTSK-KCVKL 36
>Z49132-11|CAA88991.1| 400|Caenorhabditis elegans Hypothetical
protein ZK673.9 protein.
Length = 400
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 368 VCRSGIANCWLSSMVVSQKLSLF--AK*WQV 282
VC+ I N WL +VV K L A+ WQV
Sbjct: 32 VCQGDIKNLWLDVVVVVDKSQLMTNAQLWQV 62
>Z48585-11|CAA88487.1| 400|Caenorhabditis elegans Hypothetical
protein ZK673.9 protein.
Length = 400
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 368 VCRSGIANCWLSSMVVSQKLSLF--AK*WQV 282
VC+ I N WL +VV K L A+ WQV
Sbjct: 32 VCQGDIKNLWLDVVVVVDKSQLMTNAQLWQV 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,059,336
Number of Sequences: 27780
Number of extensions: 252888
Number of successful extensions: 519
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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