Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_L22
         (497 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   0.58 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   3.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.4  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 113 NVWLWTAITLDGTSHTTHLEMYFT 42
           N WLWT     G ++  ++E+ FT
Sbjct: 70  NNWLWTPFIERGPANRMYIEIKFT 93


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -1

Query: 122 GMSNVWLWTAITLDGTSHTTHLEMYFTISFPSTGII 15
           G S V +  AI   G    TH   Y  I F   GI+
Sbjct: 134 GWSAVVITAAICTSGIVGRTHTVGYIIIGFLLAGIV 169


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 301 LQSDGKYHL 275
           LQ DGK+HL
Sbjct: 179 LQGDGKFHL 187


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 301 LQSDGKYHL 275
           LQ DGK+HL
Sbjct: 179 LQGDGKFHL 187


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,830
Number of Sequences: 438
Number of extensions: 2995
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)