Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_L20
         (483 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    22   3.4  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   3.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   7.9  

>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 253 PDNDLNFFHEDSSLQYLDESYISLHKEEIRRPSKESLKTFE 375
           PD D +   EDS   +L +   S HK+  RR      +T+E
Sbjct: 17  PDEDNS---EDSKDPHLTDQQASGHKKRKRRVLFSKAQTYE 54


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 295 VGYYLRGRNLNRYQERQLWSFLFL 224
           VGY + GRN  +Y+  +  S  F+
Sbjct: 193 VGYVVEGRNYRKYRVEERTSDGFI 216


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +1

Query: 169 DMGPMIHELPLWFKWDPLSKIETTTTDVPDND 264
           +MG   ++  LW  W P+ +I  +  +  D D
Sbjct: 464 NMGIQPYDSLLWHTWMPVMRICVSAWNPKDCD 495


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 15/79 (18%), Positives = 29/79 (36%)
 Frame = +1

Query: 55  LVSDRSWYGVGSTLRATCASPLSYPPANLTFALNGLEIDMGPMIHELPLWFKWDPLSKIE 234
           +VS++ W      L     S LSY  + +   L      +   I  L  + +  P  +I 
Sbjct: 156 IVSEQEWSFSTGLLVMIFNSALSYKASEIVVMLRSRFAILNKQIRFLNQYLRLKPEGRIS 215

Query: 235 TTTTDVPDNDLNFFHEDSS 291
                +  + + + H+  S
Sbjct: 216 NRRVFISFSKICYLHQHLS 234


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 15/79 (18%), Positives = 29/79 (36%)
 Frame = +1

Query: 55  LVSDRSWYGVGSTLRATCASPLSYPPANLTFALNGLEIDMGPMIHELPLWFKWDPLSKIE 234
           +VS++ W      L     S LSY  + +   L      +   I  L  + +  P  +I 
Sbjct: 174 IVSEQEWSFSTGLLVMIFNSALSYKASEIVVMLRSRFAILNKQIRFLNQYLRLKPEGRIS 233

Query: 235 TTTTDVPDNDLNFFHEDSS 291
                +  + + + H+  S
Sbjct: 234 NRRVFISFSKICYLHQHLS 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.135    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,025
Number of Sequences: 336
Number of extensions: 2619
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)