Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_L20
         (483 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78012-4|CAB01414.1|  435|Caenorhabditis elegans Hypothetical pr...    30   0.77 
Z81132-9|CAB03438.1|  320|Caenorhabditis elegans Hypothetical pr...    30   1.0  
Z74033-10|CAA98478.1|  805|Caenorhabditis elegans Hypothetical p...    28   3.1  
AL022272-5|CAA18355.1|  805|Caenorhabditis elegans Hypothetical ...    28   3.1  
Z83125-1|CAB05620.2|  420|Caenorhabditis elegans Hypothetical pr...    27   5.4  
Z75525-4|CAA99761.1|  161|Caenorhabditis elegans Hypothetical pr...    27   5.4  
AY037795-1|AAK94760.1|  420|Caenorhabditis elegans GLY-16 protein.     27   5.4  

>Z78012-4|CAB01414.1|  435|Caenorhabditis elegans Hypothetical
           protein C52E4.4 protein.
          Length = 435

 Score = 30.3 bits (65), Expect = 0.77
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +1

Query: 280 EDSSLQYLDESYISLHKEEIRRPSKESLKTFERTDPDNRLPSVGEVSFVVRNE 438
           E+ + Q LDE  I++ K   + P  E LKT +  D +N L  V E+S V  ++
Sbjct: 20  EEKNFQALDEGDIAVLKRYGQGPYAEQLKTLD-ADIENCLKKVNELSGVKESD 71


>Z81132-9|CAB03438.1|  320|Caenorhabditis elegans Hypothetical
           protein T26E4.11 protein.
          Length = 320

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
 Frame = +1

Query: 73  WYGVG-STLRATCAS-PLSYPPANLTFALNGLEIDMGPMIHELPLWFKWDPLSKIETTTT 246
           W  V  + LRA     P++    + T + +G+ I +   +   PLW+  +  S  E    
Sbjct: 100 WLAVSLAILRAVVIKYPINTKIQDFTSSAHGIRIFLLICLMNSPLWYLQNRFSIDEQEKW 159

Query: 247 DVPDNDLNFFHEDSSLQYLDESY 315
             P   LNF    + + YL+ S+
Sbjct: 160 TTPIECLNFTENSTQIIYLENSF 182


>Z74033-10|CAA98478.1|  805|Caenorhabditis elegans Hypothetical
           protein H12C20.2a protein.
          Length = 805

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +1

Query: 220 LSKIETTTTDVPDNDLNF-FHEDSSLQYLDESYISLHKEEIRRPSKESLKTFERTDPDNR 396
           +S   +T  D  +  LN  + EDS L   D   +   KE    P+K+S     RT+P + 
Sbjct: 395 MSSKSSTPDDFNNTTLNSTYPEDSLLNTSD--LLKQRKENRSPPAKKSCPMIRRTEPFHS 452

Query: 397 LPS 405
           +PS
Sbjct: 453 VPS 455


>AL022272-5|CAA18355.1|  805|Caenorhabditis elegans Hypothetical
           protein H12C20.2a protein.
          Length = 805

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +1

Query: 220 LSKIETTTTDVPDNDLNF-FHEDSSLQYLDESYISLHKEEIRRPSKESLKTFERTDPDNR 396
           +S   +T  D  +  LN  + EDS L   D   +   KE    P+K+S     RT+P + 
Sbjct: 395 MSSKSSTPDDFNNTTLNSTYPEDSLLNTSD--LLKQRKENRSPPAKKSCPMIRRTEPFHS 452

Query: 397 LPS 405
           +PS
Sbjct: 453 VPS 455


>Z83125-1|CAB05620.2|  420|Caenorhabditis elegans Hypothetical
           protein T15D6.2 protein.
          Length = 420

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 227 FESGSHLNHNGNSCIIGPISISRPLSAKVRLA 132
           FESG H +    SC+ G   +S  L AK  +A
Sbjct: 330 FESGCHNHMKDGSCVFGIGDVSNLLQAKALVA 361


>Z75525-4|CAA99761.1|  161|Caenorhabditis elegans Hypothetical
           protein C03D6.6 protein.
          Length = 161

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +1

Query: 232 ETTTTDVPDNDLNFFHEDSSLQYLDESYISLHKEEIRRPSKESLKTFERTDPD 390
           + + + + +N+ N+    SS+  LDE+Y  + KEE   P      T E +D D
Sbjct: 97  QESVSSISNNEANW---GSSVNELDENYEKMQKEETFDPYDSDSDTSEDSDFD 146


>AY037795-1|AAK94760.1|  420|Caenorhabditis elegans GLY-16 protein.
          Length = 420

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 227 FESGSHLNHNGNSCIIGPISISRPLSAKVRLA 132
           FESG H +    SC+ G   +S  L AK  +A
Sbjct: 330 FESGCHNHMKDGSCVFGIGDVSNLLQAKALVA 361


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.135    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,847,608
Number of Sequences: 27780
Number of extensions: 252896
Number of successful extensions: 751
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)