Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_L18
         (306 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   2.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   2.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   2.0  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   4.5  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   4.5  
M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee homeobox-...    20   7.9  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -1

Query: 201 YCSARRRAELVKAVRACGDSNKRLYFCGSSVSSSPP 94
           YC A++  + ++AV    D++    F     ++ PP
Sbjct: 216 YCYAQKHVKSIRAVTKLPDTSMAKSFVRKVHATKPP 251


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 152 QARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKI 259
           ++ T   N AL LAE Y   G  +S    KR+  K+
Sbjct: 879 ESSTDSRNPALALAEPYNQRGTVVSPPPTKRRTMKV 914


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 152  QARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKI 259
            ++ T   N AL LAE Y   G  +S    KR+  K+
Sbjct: 917  ESSTDSRNPALALAEPYNQRGTVVSPPPTKRRTMKV 952


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
          protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 2  ENLDIDRAHANYRAITN 52
          +++DIDR   N R +TN
Sbjct: 26 DDMDIDRILQNGRILTN 42


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
          protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 2  ENLDIDRAHANYRAITN 52
          +++DIDR   N R +TN
Sbjct: 26 DDMDIDRILQNGRILTN 42


>M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H40. ).
          Length = 74

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 143 ESPQARTAFTNSALLLAE 196
           E+ +ARTAFT   L+  E
Sbjct: 7   EARRARTAFTYEQLVALE 24


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,824
Number of Sequences: 438
Number of extensions: 1262
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6493812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)