Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_L12
         (532 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_27285| Best HMM Match : No HMM Matches (HMM E-Value=.)              52   3e-07
SB_23464| Best HMM Match : No HMM Matches (HMM E-Value=.)              46   1e-05
SB_53776| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.5e-12)           29   2.4  
SB_33523| Best HMM Match : DUF323 (HMM E-Value=7.5e-31)                28   5.4  
SB_56974| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.2  

>SB_27285| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 207

 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 24/38 (63%), Positives = 27/38 (71%)
 Frame = +1

Query: 1   DGFDITDEVLCSTLGAYDGRVYERLMEQALKSPLNSEP 114
           D FD +D VL S LG YDG+VY+RL E A KSPLN  P
Sbjct: 113 DAFDYSDFVLNSALGRYDGQVYQRLFELAQKSPLNKSP 150


>SB_23464| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 660

 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 22/37 (59%), Positives = 26/37 (70%)
 Frame = +1

Query: 1   DGFDITDEVLCSTLGAYDGRVYERLMEQALKSPLNSE 111
           D FD +D VL S LG YDG+VY+RL E A KS LN +
Sbjct: 9   DAFDYSDFVLNSALGRYDGQVYQRLFELAQKSELNKK 45


>SB_53776| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.5e-12)
          Length = 640

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
 Frame = +1

Query: 1   DGFDITDEVLCS-TLGAYDGRVY---ERLMEQALKSPLNSEPVNE-SFHKYIKPLMMKA 162
           DG +IT E+L   T    DG  Y    +++ + LKSP NS+P N  SF + +  + + A
Sbjct: 190 DGREITPELLVGWTTQIADGMHYLHGNKIIHRDLKSPKNSKPKNRPSFRQVLMHIEIAA 248


>SB_33523| Best HMM Match : DUF323 (HMM E-Value=7.5e-31)
          Length = 611

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 209 LNSMKTFYYNITIQSLAFIINGFIYLWKL 123
           L+ +  FY  IT+Q L+  +N  +Y W++
Sbjct: 563 LSLVAAFYVLITLQFLSSFVNPLVYCWRV 591


>SB_56974| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 785

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -2

Query: 492 NFQIFQNFRTKLKHYAKKTWDIR*EVRANVKLRQVLLEWRWMRVT 358
           N + F+N RT+ K ++ K W +        + +Q +L W W ++T
Sbjct: 67  NNEKFKNVRTENKTFSTKVWQL-------PEAQQFMLVWGWTQIT 104


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,376,497
Number of Sequences: 59808
Number of extensions: 253156
Number of successful extensions: 476
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1191330434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)