Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_L11
(392 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533465-1|CAG38496.1| 105|Homo sapiens RPL36 protein. 132 4e-31
BC091508-1|AAH91508.1| 105|Homo sapiens ribosomal protein L36 p... 132 4e-31
BC004971-1|AAH04971.1| 105|Homo sapiens ribosomal protein L36 p... 132 4e-31
BC003052-1|AAH03052.1| 105|Homo sapiens ribosomal protein L36 p... 132 4e-31
AB061833-1|BAB79471.1| 105|Homo sapiens ribosomal protein L36 p... 132 4e-31
AB046410-1|BAB21256.1| 32|Homo sapiens ribosomal protein L36 p... 64 2e-10
BC125162-1|AAI25163.1| 544|Homo sapiens NBPF4 protein protein. 35 0.11
BC043522-1|AAH43522.1| 410|Homo sapiens NBPF5 protein protein. 35 0.11
AL392088-1|CAI23469.1| 649|Homo sapiens novel protein similar t... 35 0.11
AL390038-2|CAH70399.1| 649|Homo sapiens novel protein similar t... 35 0.11
AL359258-3|CAI14514.1| 638|Homo sapiens novel protein protein. 35 0.11
BC125161-1|AAI25162.1| 573|Homo sapiens NBPF4 protein protein. 29 7.2
BC008833-1|AAH08833.1| 425|Homo sapiens coiled-coil domain cont... 29 7.2
AK000298-1|BAA91065.1| 425|Homo sapiens protein ( Homo sapiens ... 29 7.2
X83957-1|CAA58788.1| 6669|Homo sapiens nebulin protein. 28 9.5
U35637-1|AAB02622.1| 3007|Homo sapiens nebulin protein. 28 9.5
L34600-1|AAA67038.1| 727|Homo sapiens initiation factor 2 protein. 28 9.5
EF178036-1|ABM67191.1| 125|Homo sapiens immunoglobulin heavy ch... 28 9.5
BC008573-1|AAH08573.1| 48|Homo sapiens HIG2 protein protein. 28 9.5
AF495546-1|AAM70196.1| 727|Homo sapiens translation initiation ... 28 9.5
AF494407-1|AAM14617.1| 727|Homo sapiens mitochondrial translati... 28 9.5
AC009497-1|AAY14651.1| 2802|Homo sapiens unknown protein. 28 9.5
>CR533465-1|CAG38496.1| 105|Homo sapiens RPL36 protein.
Length = 105
Score = 132 bits (319), Expect = 4e-31
Identities = 69/108 (63%), Positives = 81/108 (75%)
Frame = +3
Query: 15 MAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGH 194
MA R+ +A+GL KGHK TK K R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 195 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMR 338
A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVL MR
Sbjct: 51 APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
>BC091508-1|AAH91508.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 132 bits (319), Expect = 4e-31
Identities = 69/108 (63%), Positives = 81/108 (75%)
Frame = +3
Query: 15 MAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGH 194
MA R+ +A+GL KGHK TK K R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 195 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMR 338
A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVL MR
Sbjct: 51 APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
>BC004971-1|AAH04971.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 132 bits (319), Expect = 4e-31
Identities = 69/108 (63%), Positives = 81/108 (75%)
Frame = +3
Query: 15 MAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGH 194
MA R+ +A+GL KGHK TK K R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 195 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMR 338
A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVL MR
Sbjct: 51 APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
>BC003052-1|AAH03052.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 132 bits (319), Expect = 4e-31
Identities = 69/108 (63%), Positives = 81/108 (75%)
Frame = +3
Query: 15 MAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGH 194
MA R+ +A+GL KGHK TK K R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 195 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMR 338
A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVL MR
Sbjct: 51 APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
>AB061833-1|BAB79471.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 132 bits (319), Expect = 4e-31
Identities = 69/108 (63%), Positives = 81/108 (75%)
Frame = +3
Query: 15 MAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGH 194
MA R+ +A+GL KGHK TK K R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 195 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMR 338
A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVL MR
Sbjct: 51 APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
>AB046410-1|BAB21256.1| 32|Homo sapiens ribosomal protein L36
protein.
Length = 32
Score = 63.7 bits (148), Expect = 2e-10
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +3
Query: 225 LKVSKDKRALKFLKRRLGTHIRAKRKREELSN 320
LKVSKDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>BC125162-1|AAI25163.1| 544|Homo sapiens NBPF4 protein protein.
Length = 544
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +2
Query: 260 LEASPRHTHPREEEA*RAQQRTNTD--EEGGRTPSPPRHH 373
L H H EEEA D EE G+ P PPRHH
Sbjct: 242 LVVESEHPHDEEEEALNIPPENQNDHEEEEGKAPVPPRHH 281
>BC043522-1|AAH43522.1| 410|Homo sapiens NBPF5 protein protein.
Length = 410
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +2
Query: 260 LEASPRHTHPREEEA*RAQQRTNTD--EEGGRTPSPPRHH 373
L H H EEEA D EE G+ P PPRHH
Sbjct: 301 LVVESEHPHDEEEEALNIPPENQNDHEEEEGKAPVPPRHH 340
>AL392088-1|CAI23469.1| 649|Homo sapiens novel protein similar to
FLJ32883 containing DUF1220 domains protein.
Length = 649
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +2
Query: 260 LEASPRHTHPREEEA*RAQQRTNTD--EEGGRTPSPPRHH 373
L H H EEEA D EE G+ P PPRHH
Sbjct: 253 LVVESEHPHDEEEEALNIPPENQNDHEEEEGKAPVPPRHH 292
>AL390038-2|CAH70399.1| 649|Homo sapiens novel protein similar to
FLJ32883 containing DUF1220 domains protein.
Length = 649
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +2
Query: 260 LEASPRHTHPREEEA*RAQQRTNTD--EEGGRTPSPPRHH 373
L H H EEEA D EE G+ P PPRHH
Sbjct: 253 LVVESEHPHDEEEEALNIPPENQNDHEEEEGKAPVPPRHH 292
>AL359258-3|CAI14514.1| 638|Homo sapiens novel protein protein.
Length = 638
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +2
Query: 260 LEASPRHTHPREEEA*RAQQRTNTD--EEGGRTPSPPRHH 373
L H H EEEA D EE G+ P PPRHH
Sbjct: 242 LVVESEHPHDEEEEALNIPPENQNDHEEEEGKAPVPPRHH 281
>BC125161-1|AAI25162.1| 573|Homo sapiens NBPF4 protein protein.
Length = 573
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +2
Query: 260 LEASPRHTHPREEEA*RAQQRTNTD--EEGGRTPSPPRH 370
L H H EEEA D EE G+ P PPR+
Sbjct: 242 LVVESEHPHDEEEEALNIPPENQNDHEEEEGKAPVPPRN 280
>BC008833-1|AAH08833.1| 425|Homo sapiens coiled-coil domain
containing 49 protein.
Length = 425
Score = 28.7 bits (61), Expect = 7.2
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +3
Query: 78 AGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALK 257
+G + D A KIR L I+ K + REV+ + K+ ELL++S +K+ K
Sbjct: 122 SGANSLLDMASKIREDPLFIIRKKEE----EKKREVLNNPVKMKKIKELLQMSLEKKEKK 177
Query: 258 FLKRRLGTHIRAKRK 302
K + H + K +
Sbjct: 178 KKKEKKKKHKKHKHR 192
>AK000298-1|BAA91065.1| 425|Homo sapiens protein ( Homo sapiens
cDNA FLJ20291 fis, clone HEP04788. ).
Length = 425
Score = 28.7 bits (61), Expect = 7.2
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +3
Query: 78 AGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALK 257
+G + D A KIR L I+ K + REV+ + K+ ELL++S +K+ K
Sbjct: 122 SGANSLLDMASKIREDPLFIIRKKEE----EKKREVLNNPVKMKKIKELLQMSLEKKEKK 177
Query: 258 FLKRRLGTHIRAKRK 302
K + H + K +
Sbjct: 178 KKKEKKKKHKKHKHR 192
>X83957-1|CAA58788.1| 6669|Homo sapiens nebulin protein.
Length = 6669
Score = 28.3 bits (60), Expect = 9.5
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +3
Query: 105 AIKIRPARLKGIQT---KHSKFVRDLVREVVGHAQYEK 209
A K RP G QT KH+K V+D+V E QYEK
Sbjct: 5200 ATKERPHHHAGNQTTALKHAKDVKDMVSEKKYKIQYEK 5237
>U35637-1|AAB02622.1| 3007|Homo sapiens nebulin protein.
Length = 3007
Score = 28.3 bits (60), Expect = 9.5
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +3
Query: 105 AIKIRPARLKGIQT---KHSKFVRDLVREVVGHAQYEK 209
A K RP G QT KH+K V+D+V E QYEK
Sbjct: 1631 ATKERPHHHAGNQTTALKHAKDVKDMVSEKKYKIQYEK 1668
>L34600-1|AAA67038.1| 727|Homo sapiens initiation factor 2 protein.
Length = 727
Score = 28.3 bits (60), Expect = 9.5
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +3
Query: 147 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 326
K K RE GH ++KR++ L+FL+R+ ++ K KRE SNVL
Sbjct: 468 KEHKEAHQKAREKYGHLLWKKRSI-----------LRFLERKEQIPLKPKEKRERDSNVL 516
Query: 327 T 329
+
Sbjct: 517 S 517
>EF178036-1|ABM67191.1| 125|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 125
Score = 28.3 bits (60), Expect = 9.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 378 CEWWRGGLGVRPPSSSVLVRC 316
C WW G V+ P +SV V C
Sbjct: 4 CSWWSLGAEVKKPGASVKVSC 24
>BC008573-1|AAH08573.1| 48|Homo sapiens HIG2 protein protein.
Length = 48
Score = 28.3 bits (60), Expect = 9.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 207 KRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN 320
+R+ + VS+D+ A+ L H++ K+KR+ L N
Sbjct: 8 RRSFAFVAVSRDRTAVPSLGHSARLHLKKKKKRKSLFN 45
>AF495546-1|AAM70196.1| 727|Homo sapiens translation initiation
factor 2 protein.
Length = 727
Score = 28.3 bits (60), Expect = 9.5
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +3
Query: 147 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 326
K K RE GH ++KR++ L+FL+R+ ++ K KRE SNVL
Sbjct: 468 KEHKEAHQKAREKYGHLLWKKRSI-----------LRFLERKEQIPLKPKEKRERDSNVL 516
Query: 327 T 329
+
Sbjct: 517 S 517
>AF494407-1|AAM14617.1| 727|Homo sapiens mitochondrial
translation-initiation factor 2 protein.
Length = 727
Score = 28.3 bits (60), Expect = 9.5
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +3
Query: 147 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 326
K K RE GH ++KR++ L+FL+R+ ++ K KRE SNVL
Sbjct: 468 KEHKEAHQKAREKYGHLLWKKRSI-----------LRFLERKEQIPLKPKEKRERDSNVL 516
Query: 327 T 329
+
Sbjct: 517 S 517
>AC009497-1|AAY14651.1| 2802|Homo sapiens unknown protein.
Length = 2802
Score = 28.3 bits (60), Expect = 9.5
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +3
Query: 105 AIKIRPARLKGIQT---KHSKFVRDLVREVVGHAQYEK 209
A K RP G QT KH+K V+D+V E QYEK
Sbjct: 1333 ATKERPHHHAGNQTTALKHAKDVKDMVSEKKYKIQYEK 1370
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,134,337
Number of Sequences: 237096
Number of extensions: 1020115
Number of successful extensions: 6562
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6557
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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