BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0002_L09 (608 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_01_0322 - 2335577-2335931,2336030-2336991 31 0.54 07_01_0600 - 4462337-4462774 30 1.2 09_06_0209 - 21594374-21594494,21594579-21595522 29 2.9 09_02_0214 + 5846531-5846872,5847660-5847708,5847975-5848090,584... 28 5.0 10_06_0006 - 9496990-9497592,9497695-9497802,9497884-9497997,949... 28 6.7 09_06_0208 - 21590647-21590767,21590863-21591794 27 8.8 09_06_0207 - 21585910-21586027,21586642-21587193,21587270-21587577 27 8.8 05_03_0283 + 11597128-11597467,11598033-11598046 27 8.8 05_03_0093 + 8340210-8340548,8344290-8344676,8344759-8345118 27 8.8 02_04_0510 + 23558111-23559613 27 8.8 >06_01_0322 - 2335577-2335931,2336030-2336991 Length = 438 Score = 31.5 bits (68), Expect = 0.54 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +2 Query: 449 RSAHLRVNLATHIAWRAAVLKVQTPRALPPPDARCSATKPVNRC 580 R+A++ +AT + A VL+ T R+L C AT P++RC Sbjct: 56 RAAYVSDPVATLNRFNADVLRATTRRSLARYTGPCMATNPIDRC 99 >07_01_0600 - 4462337-4462774 Length = 145 Score = 30.3 bits (65), Expect = 1.2 Identities = 20/68 (29%), Positives = 31/68 (45%) Frame = +2 Query: 395 FSAMVTMSHTMTSDYLTERSAHLRVNLATHIAWRAAVLKVQTPRALPPPDARCSATKPVN 574 FS+M S + + Y HLR+ + I V++ P +P P RCSA+ + Sbjct: 34 FSSMPPRSRAVDAAYCYSAPVHLRLPVRHTII----VVRPPHPSTVPTPARRCSASSSSS 89 Query: 575 RCSEESPH 598 C +PH Sbjct: 90 HCI--TPH 95 >09_06_0209 - 21594374-21594494,21594579-21595522 Length = 354 Score = 29.1 bits (62), Expect = 2.9 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -3 Query: 549 RASGGGSARGVWTFRTAARQAICVAK 472 R G + RG W R AA QA+ VA+ Sbjct: 235 RLDAGAAVRGPWVLRDAAAQAVYVAR 260 >09_02_0214 + 5846531-5846872,5847660-5847708,5847975-5848090, 5848169-5848282,5849050-5849100,5849746-5849834, 5849911-5849971,5850103-5850180,5850334-5850441, 5850832-5850957 Length = 377 Score = 28.3 bits (60), Expect = 5.0 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = +2 Query: 455 AHLRVNLATHIAWRAAVLKVQTPRALPPPDARCSATKPVNRCS 583 A LR+ + + IA +++ + +ALPPPD CS + N C+ Sbjct: 220 AGLRMMVGSEIATVSSISR-HVDKALPPPDNICSLFQLENGCA 261 >10_06_0006 - 9496990-9497592,9497695-9497802,9497884-9497997, 9498170-9498219,9498346-9498434,9498542-9498738, 9498877-9499038,9499337-9499455,9499579-9499666, 9499744-9499849,9499968-9500056,9500167-9500319, 9500434-9500526,9500625-9500691,9500811-9500923, 9501544-9501639,9501782-9501961 Length = 808 Score = 27.9 bits (59), Expect = 6.7 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Frame = +1 Query: 70 PGQCRYVLIHDYVDR---NFTVLLQLQNGQPKALVLEDK-SGTIIELKDNGQ-VTLNGAA 234 P Q Y + ++++ N +L + G P + + G++ + G VTL+ A Sbjct: 679 PSQQLYHVPRSFLNKGEPNTLILFEEAGGDPSEVAVRTVVEGSVCASAEVGDTVTLSCGA 738 Query: 235 HGFPVIEKDVFAFKQTNGRIG 297 HG + DV +F GR G Sbjct: 739 HGRTISSVDVASFGVARGRCG 759 >09_06_0208 - 21590647-21590767,21590863-21591794 Length = 350 Score = 27.5 bits (58), Expect = 8.8 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 Query: 537 GGSARGVWTFRTAARQAICVAK 472 G + RG W R AA QA+ VA+ Sbjct: 236 GAAVRGPWVLRDAAAQAVYVAR 257 >09_06_0207 - 21585910-21586027,21586642-21587193,21587270-21587577 Length = 325 Score = 27.5 bits (58), Expect = 8.8 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 Query: 537 GGSARGVWTFRTAARQAICVAK 472 G + RG W R AA QA+ VA+ Sbjct: 211 GAAVRGPWVLRDAAAQAVYVAR 232 >05_03_0283 + 11597128-11597467,11598033-11598046 Length = 117 Score = 27.5 bits (58), Expect = 8.8 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -3 Query: 561 VAEQRASGGGSARGVWTFRTAARQAICVA 475 VA +GGGS G W +R AA A+ +A Sbjct: 70 VAVAMVAGGGSGDGGWRWRLAAVVAVALA 98 >05_03_0093 + 8340210-8340548,8344290-8344676,8344759-8345118 Length = 361 Score = 27.5 bits (58), Expect = 8.8 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = +3 Query: 528 HSHHQMHAALPPSL*TGV 581 H HH H ALPP L GV Sbjct: 28 HHHHHHHHALPPHLPAGV 45 >02_04_0510 + 23558111-23559613 Length = 500 Score = 27.5 bits (58), Expect = 8.8 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = -2 Query: 412 CYHRREDHVVCLGRNHSLRSSKPQV*KYRRPLIRI 308 CY+ R+D + + + +S KP + Y RPL+R+ Sbjct: 371 CYYGRDDDALNVLKEMEAQSCKPDIQSY-RPLLRL 404 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,187,678 Number of Sequences: 37544 Number of extensions: 357529 Number of successful extensions: 1112 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1085 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1112 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1454766756 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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