Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_L09
(608 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 45 1e-09
SB_26224| Best HMM Match : VWD (HMM E-Value=0) 52 5e-07
SB_14316| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_32701| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_42045| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_42849| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.045
SB_27645| Best HMM Match : VWD (HMM E-Value=0.016) 31 0.55
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_47158| Best HMM Match : pKID (HMM E-Value=0.22) 29 3.9
SB_14011| Best HMM Match : DUF765 (HMM E-Value=1.6) 29 3.9
SB_34342| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 28 5.1
SB_2933| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_49264| Best HMM Match : Ank (HMM E-Value=3.7e-22) 27 9.0
SB_21203| Best HMM Match : MFS_1 (HMM E-Value=0.0055) 27 9.0
SB_18955| Best HMM Match : rve (HMM E-Value=5.9e-17) 27 9.0
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 44.8 bits (101), Expect(2) = 1e-09
Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Frame = +1
Query: 13 AVVINGQHIFTFDGKHLTFPG----QCRYVLIHDYVDRNFTVLLQ-------LQNGQPKA 159
A++ H+ TFD + FPG +C YVL D D FT++ Q ++G K
Sbjct: 1644 AMIFGKPHVSTFDSLYYRFPGYNKPECTYVLARDVRDNKFTIMSQEDAMILITEDGNVK- 1702
Query: 160 LVLEDKSGTIIELKDNGQVTLNGAAHGFPVIEKDVFAFKQTNGRIGLGSKYGLMAFCTSK 339
+ + +++++ G L+G PV K++ ++ + L G+ C +
Sbjct: 1703 IHSSGRVESMVKIDAEGNKILDGYNSELPVQTKNMTVTRE-GPFVVLRHDIGIEILCDME 1761
Query: 340 LEVCYFEVNGFYLGKLRG 393
C F + ++ G+L G
Sbjct: 1762 HNACTFNFDKWFHGRLAG 1779
Score = 35.1 bits (77), Expect(2) = 1e-09
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 391 GLLGDGNNEPYDDFRLPNGKICTSESEFGNAYSL 492
GLLG NNE +D+ PNGK S EF N++ +
Sbjct: 1811 GLLGTNNNEHHDEMTKPNGKHAGSLIEFVNSWEV 1844
>SB_26224| Best HMM Match : VWD (HMM E-Value=0)
Length = 736
Score = 51.6 bits (118), Expect = 5e-07
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Frame = +1
Query: 31 QHIFTFDGKHLTFPGQCRYVLIHDYVDRNFTVLLQLQNGQ---------PKALVLEDKSG 183
+H TFDG+H+ F G+C Y L D + + L +QN + +AL+L
Sbjct: 222 RHYRTFDGRHIDFIGKCSYTLAQDCIPGSDQFSLHVQNDKTCGSAGMDCERALLLYIGEK 281
Query: 184 TIIELKDNGQVTLNGAAHGFPVIEKDVFAFKQTNGRI--GLGSKYGLMAFCTSKLEVCYF 357
T ++ +G + +NGA P + +V K + I G + G+ S ++V
Sbjct: 282 T-YKISSHGAIRVNGAKVSAPYKDTNVEVSKVHSYTIIRSQGDELGIKFDGASSIQVA-- 338
Query: 358 EVNGFYLGKLRGLLGDGNNEPYDDFRLP-NGKICTSESEFGNAYSL 492
V+ Y GL G+ N P DD + K TS +EF ++++
Sbjct: 339 -VSHKYRNNTCGLCGNNNGIPDDDLLMAVTNKPATSVAEFAESWAM 383
Score = 31.1 bits (67), Expect = 0.73
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 34 HIFTFDGKHLTFPGQCRYVL 93
H +FDGK TF G+C+Y+L
Sbjct: 576 HFVSFDGKAFTFGGKCQYLL 595
>SB_14316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1472
Score = 50.0 bits (114), Expect = 1e-06
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 7/148 (4%)
Frame = +1
Query: 70 PGQCRYVLIHDYVDRNFTVLLQL--QNGQPKALVLEDKSGTIIELKDNGQVTLNGAAHGF 243
P +YVL D + F VL + QN ++++ II++ + VT+NG A
Sbjct: 1326 PKCVQYVLAQDRNNEVFRVLAKRDQQNRLHLQVIVKITKQVIIKVSPDLTVTVNGKACED 1385
Query: 244 PVIEKDVFA-FKQTNGRIGLGSKYGL----MAFCTSKLEVCYFEVNGFYLGKLRGLLGDG 408
V E A + RI + Y L + + ++++V N F +LRGL GD
Sbjct: 1386 KVCEVSGAARIVRREQRIKVQINYKLSSLHVVYMPNRIQV---HANPFLQNRLRGLCGDM 1442
Query: 409 NNEPYDDFRLPNGKICTSESEFGNAYSL 492
N E YD+F+ P G+ + +F A+ L
Sbjct: 1443 NGEQYDEFQSPTGEFLNNADQFQKAWRL 1470
>SB_32701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1
Query: 364 NGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYSL 492
N F +LRGL GD N E YD+F+ P G+ + +F A+ L
Sbjct: 18 NPFLQNRLRGLCGDMNGEQYDEFQSPTGEFLNNADQFQKAWRL 60
>SB_42045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 373 YLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYSL 492
Y G GL G+ N P DDF + NG+ S+ EFG ++SL
Sbjct: 176 YRGNTCGLCGNFNGVPSDDFMMKNGRYARSDREFGKSWSL 215
>SB_42849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 391 GLLGDGNNEPYDDFRLPNGKICTSESEFGNAYSL 492
GLLG NNE +D+ PNGK S EF N++ +
Sbjct: 63 GLLGTNNNEHHDEMTKPNGKHAGSLIEFVNSWEV 96
>SB_27645| Best HMM Match : VWD (HMM E-Value=0.016)
Length = 237
Score = 31.5 bits (68), Expect = 0.55
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 340 LEVCYFEVNGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNA 483
L V + FY G GL GD +N P +DF P G+ T +F +
Sbjct: 187 LNVLFTPTAAFY-GNTGGLCGDMDNNPANDFTGPTGERFTDAVQFAES 233
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +1
Query: 19 VINGQHIFTFDGKHLTFPGQCRYVL-----IHDYVDRNFTVLLQLQNGQPKALVLEDKSG 183
++ H TFD + + GQC YVL + + FT+ +++ + + L++
Sbjct: 852 MVGNSHFTTFDSRSYSMHGQCDYVLSEHCHFSNDTTKQFTIHIKISSDGSRQLIVSLAGA 911
Query: 184 TIIEL 198
T + L
Sbjct: 912 TPVTL 916
>SB_47158| Best HMM Match : pKID (HMM E-Value=0.22)
Length = 309
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -3
Query: 213 LSIVFKLNDGSALVLQNQCLGLS 145
+ I K N+G ++VL+N CLG++
Sbjct: 32 IEISLKTNEGDSMVLENWCLGMN 54
>SB_14011| Best HMM Match : DUF765 (HMM E-Value=1.6)
Length = 217
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -3
Query: 213 LSIVFKLNDGSALVLQNQCLGLS 145
+ I K N+G ++VL+N CLG++
Sbjct: 32 IEISLKTNEGDSMVLENWCLGMN 54
>SB_34342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = +1
Query: 1 AKLRAVVINGQHIFTFDGKHLTFPGQCRYVLIHDYVDRNFTVLLQLQNGQPKALVLEDKS 180
A L + I+ HIF DG H FP + V H + T ++L L+LE +
Sbjct: 247 ASLINIAIHFSHIFAGDGFHFVFPSLLQ-VYAHHQGNDMVTRAIELFASVAPILLLETRL 305
Query: 181 GTIIELKDNGQVTL 222
EL+ + L
Sbjct: 306 EDATELEPDDPTAL 319
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 4 KLRAVVINGQHIFTFDGKHLTFPGQCRYVLIHD 102
K H TFDG+ +F G C YV+ D
Sbjct: 23 KATCTAFGDPHYKTFDGRLYSFQGGCNYVMSTD 55
>SB_2933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 467 VNLATHI-AWRAAVLKVQTPRALPPPDARCSATKPVNRCSEESPHFG 604
VN A I +R A++ P+ PPD C T N C HFG
Sbjct: 329 VNYARRINTYREAIIIPLVPK---PPDVSCPVTLSQNACFASHWHFG 372
>SB_49264| Best HMM Match : Ank (HMM E-Value=3.7e-22)
Length = 775
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 237 VGSSIQCHLSIVFKLNDGSALVLQNQCLGLSVL 139
+GSSI CH+ +F+L + + NQ + VL
Sbjct: 435 MGSSINCHVRALFRLTWKACTEVDNQATKMPVL 467
>SB_21203| Best HMM Match : MFS_1 (HMM E-Value=0.0055)
Length = 554
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 64 TFPGQCRYVLIHDYVDRNFTVLLQL 138
+FPG Y L+H ++D VLL L
Sbjct: 191 SFPGLLTYALLHGFIDSGSGVLLAL 215
>SB_18955| Best HMM Match : rve (HMM E-Value=5.9e-17)
Length = 421
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 358 EVNGFYLGKLRGLLGDGNNEPYDDFRLPNGKICT 459
EVN F L K G DG + P LP G + T
Sbjct: 384 EVNAFELAKFLGNRSDGMSNPTYSLPLPGGLVDT 417
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,173,745
Number of Sequences: 59808
Number of extensions: 382742
Number of successful extensions: 834
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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