Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_L08
         (503 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53180-2|AAK68284.1|  477|Caenorhabditis elegans Hypothetical pr...    33   0.16 
AC024796-1|ABB88219.1|  210|Caenorhabditis elegans Hypothetical ...    30   0.83 
AC098856-2|AAL27251.1|   96|Caenorhabditis elegans Hypothetical ...    29   1.9  
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p...    27   5.8  
U28928-10|AAN63432.2|  388|Caenorhabditis elegans Hypothetical p...    27   7.7  

>U53180-2|AAK68284.1|  477|Caenorhabditis elegans Hypothetical
           protein D1014.6 protein.
          Length = 477

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
 Frame = +1

Query: 133 VYIRSGDTPLEEI-NPYLAEAFH---AIPAGRSVGKKVDASPETPEQADQPQPEIPELVD 300
           VY R  D   +EI +P+    F       A R   K +  S  T EQA+ P P +P + +
Sbjct: 148 VYCRYYDCHRKEIPDPFKTSVFPESTVFCARRPGAKYISISKTTEEQAELPIPIVPRIEN 207

Query: 301 PIHY 312
           P HY
Sbjct: 208 PPHY 211


>AC024796-1|ABB88219.1|  210|Caenorhabditis elegans Hypothetical
           protein Y48G1C.12 protein.
          Length = 210

 Score = 30.3 bits (65), Expect = 0.83
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +1

Query: 127 VPVYIRSGDTPLEEINPYLAEAFHAIPAGRSVGKKVDASPETPEQADQPQP 279
           +P  I S DTPL +I+     A  +  +G  + + +  S E   Q+D PQP
Sbjct: 13  IPTDIDSKDTPLLDISSQAIWALSSCKSGFGIDELLSDSVEKYWQSDGPQP 63


>AC098856-2|AAL27251.1|   96|Caenorhabditis elegans Hypothetical
           protein Y37F4.4 protein.
          Length = 96

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 13/51 (25%), Positives = 25/51 (49%)
 Frame = +1

Query: 163 EEINPYLAEAFHAIPAGRSVGKKVDASPETPEQADQPQPEIPELVDPIHYP 315
           +E++P   E    +PA  +   +++  PE P     P P +P++  P+  P
Sbjct: 22  KEVHPNADEQQPTVPAPAATPAQIEQQPEVP----APAPTVPDVQQPVLVP 68


>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical protein
            T11G6.5 protein.
          Length = 1406

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
 Frame = +1

Query: 205  PAGRSVGKK------VDASPETPEQADQPQPEIPELVDPIHY 312
            P G S+G++      V++  E PEQ   P PEI  + D   Y
Sbjct: 981  PEGISIGRRESDPAPVNSRVEEPEQIRSPSPEITRMADVEEY 1022


>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
            protein T11G6.5 protein.
          Length = 1406

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
 Frame = +1

Query: 205  PAGRSVGKK------VDASPETPEQADQPQPEIPELVDPIHY 312
            P G S+G++      V++  E PEQ   P PEI  + D   Y
Sbjct: 981  PEGISIGRRESDPAPVNSRVEEPEQIRSPSPEITRMADVEEY 1022


>U28928-10|AAN63432.2|  388|Caenorhabditis elegans Hypothetical
           protein C44B7.12 protein.
          Length = 388

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 144 PYVDRYVTRSLR*KLPFGTCLNDDTANNT*QNYRFVHFVFF 22
           PY + Y+T     K+P   CL+ +  + T  NYR  HF ++
Sbjct: 277 PYTE-YLTNKY--KIPLEICLSSNVYSKTTTNYRNSHFNYW 314


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,871,180
Number of Sequences: 27780
Number of extensions: 182534
Number of successful extensions: 523
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)