BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0002_L07 (538 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 182 4e-47 SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 83 3e-17 SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 82 6e-17 SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 56 4e-09 SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces p... 27 1.8 SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc... 27 2.3 SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyce... 27 2.3 SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom... 27 2.3 SPBC13E7.06 |msd1|mug172|spindle pole body protein Msd1|Schizosa... 26 3.1 SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharo... 26 3.1 SPAC343.08c |mrp17||mitochondrial ribosomal protein subunit Mrp1... 26 3.1 SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 26 3.1 SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 4.1 SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 25 5.4 SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 5.4 SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 25 5.4 SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 7.2 SPAC13F5.01c |msh1|SPAC23C11.18c|MutS protein homolog 1|Schizosa... 25 7.2 SPBC409.19c |||metaxin|Schizosaccharomyces pombe|chr 2|||Manual 25 9.5 SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 25 9.5 SPAC227.02c |||rRNA processing protein Rrp15 |Schizosaccharomyce... 25 9.5 SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 25 9.5 SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 25 9.5 SPCC777.08c |||HbrB family protein|Schizosaccharomyces pombe|chr... 25 9.5 >SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces pombe|chr 2|||Manual Length = 448 Score = 182 bits (442), Expect = 4e-47 Identities = 81/113 (71%), Positives = 99/113 (87%), Gaps = 1/113 (0%) Frame = +2 Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRR 181 S+Q KNS+YFVEWIP+NV AVC +PPK LKMS+TFIGN+T+IQE+F+R+ +QFSAMFRR Sbjct: 332 SVQTKNSAYFVEWIPDNVLKAVCSVPPKDLKMSATFIGNSTSIQEIFRRLGDQFSAMFRR 391 Query: 182 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDA-TAEDDTEFDQEDMEE 337 KAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQ+A E D +++ E+ +E Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGIDEGDEDYEIEEEKE 444 >SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosaccharomyces pombe|chr 2|||Manual Length = 449 Score = 82.6 bits (195), Expect = 3e-17 Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 8/110 (7%) Frame = +2 Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSST--------FIGNTTAIQELFKRISE 157 +I+ K + FV+W P K +CD PP+ ++ S + NTT+I E + R+ Sbjct: 334 TIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDH 393 Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDD 307 +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ + E D Sbjct: 394 KFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDSMEVD 443 >SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr 2|||Manual Length = 455 Score = 81.8 bits (193), Expect = 6e-17 Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 9/117 (7%) Frame = +2 Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSST--------FIGNTTAIQELFKRISE 157 SI+++ + FV+W P K +C PP+ + S + NTT+I E + R+ Sbjct: 338 SIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDH 397 Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQY-QDATAEDDTEFDQE 325 +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ QD+ + E D+E Sbjct: 398 KFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDSMDNEMYEADEE 454 >SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr 2|||Manual Length = 446 Score = 55.6 bits (128), Expect = 4e-09 Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 6/101 (5%) Frame = +2 Query: 5 IQNKNSSYFVEWIPNNVKTAVCDIPP---KGLKMSSTFIGNTTAIQELFKRISEQFSAMF 175 I+ + + F+ W P +++ A+ P ++S + N T+I LFKR +Q+ + Sbjct: 340 IRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGLMLANHTSIASLFKRTLDQYDRLR 399 Query: 176 RRKAFLHWYTGEGMDEMEFNEAESN---VNDLVSEYQQYQD 289 +R AFL Y E + E + NE +S+ V DL++EY+ +D Sbjct: 400 KRNAFLEQYKKEAIFEDDLNEFDSSRDVVADLINEYEACED 440 >SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces pombe|chr 3|||Manual Length = 1040 Score = 27.1 bits (57), Expect = 1.8 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = +2 Query: 359 D*IGSIPPIYEILLLKNMVNKYFIV 433 D I ++ PI+++L+LKN + K F+V Sbjct: 337 DSIPNLGPIHDLLVLKNDIEKSFLV 361 >SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1958 Score = 26.6 bits (56), Expect = 2.3 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 110 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQ 286 + N + L+K + E+FS +F RK L WY G+ E + N+N SE + Q Sbjct: 1703 LNNPHLLFTLYKLL-ERFSLIFLRKCALLWYCRYGVS----FETQPNLNFQNSELSRLQ 1756 >SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyces pombe|chr 2|||Manual Length = 512 Score = 26.6 bits (56), Expect = 2.3 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Frame = +2 Query: 254 NDLVSEYQQ--YQDATAEDDTEFDQEDMEELAQDE 352 NDL E QQ A ++D E D+E E L++DE Sbjct: 445 NDLADETQQTLLTSALDDEDEEGDEEMEEALSEDE 479 >SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 592 Score = 26.6 bits (56), Expect = 2.3 Identities = 11/37 (29%), Positives = 21/37 (56%) Frame = +3 Query: 207 ARAWTRWNSTRRRAMSMIWFRNTSSTRTRPLKMTRNL 317 A ++ W+S R+RA+ I F N S + +++ +L Sbjct: 424 ASSFNVWSSVRKRAIETIEFFNPDSYNVKKIRLLNDL 460 >SPBC13E7.06 |msd1|mug172|spindle pole body protein Msd1|Schizosaccharomyces pombe|chr 2|||Manual Length = 331 Score = 26.2 bits (55), Expect = 3.1 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = -2 Query: 255 LTLLSASLNSISSMPSPVYQCKKALRLNIAENCSDILLNS 136 LT LS +LNS+ M SP+Y+ + + E + ILL++ Sbjct: 234 LTCLSGTLNSLVEMLSPLYERPNSNPFEVCE-LNAILLDA 272 >SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharomyces pombe|chr 1|||Manual Length = 1163 Score = 26.2 bits (55), Expect = 3.1 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = +3 Query: 213 AWTRWNSTRRRAMSMIWF--RNTSSTRTRPLKMTRNLTR 323 +WT NS + +++F NT TR R L++ N+ + Sbjct: 131 SWTHGNSCKTSIYILLFFALSNTEKTRVRSLQILANILK 169 >SPAC343.08c |mrp17||mitochondrial ribosomal protein subunit Mrp17|Schizosaccharomyces pombe|chr 1|||Manual Length = 109 Score = 26.2 bits (55), Expect = 3.1 Identities = 12/44 (27%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = -2 Query: 183 LRLNIAENCSDILLNSSWMAV-VLPMNVEDILRPLGGMSHTAVF 55 L +NIA+NC +L++ + V V M ++++ +P+ ++ + F Sbjct: 22 LAMNIAKNCGRAILDNKGVVVDVESMGLKELAKPIKKLNQSYSF 65 >SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosaccharomyces pombe|chr 1|||Manual Length = 990 Score = 26.2 bits (55), Expect = 3.1 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Frame = +2 Query: 206 GEGMDEMEFNEAESN--VNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDE 352 GE +E E + +N D + + ++A A ++ E D+ED EE +DE Sbjct: 77 GEDGNENEVDNVNNNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDEEDE 127 >SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 800 Score = 25.8 bits (54), Expect = 4.1 Identities = 30/92 (32%), Positives = 38/92 (41%) Frame = +3 Query: 108 SSVTPQPSRSCLREYQSSSPLCSDARLSCTGTPARAWTRWNSTRRRAMSMIWFRNTSSTR 287 S+ TP P S SSSPL S + SCT T NST + +TSST Sbjct: 312 STSTPPPPASTSSTGTSSSPLPSTS-TSCT-TSTSIPPTGNST-TPVTPTVPPTSTSSTS 368 Query: 288 TRPLKMTRNLTRKIWRSSLKTSTMIKSVLYLP 383 T P + + T L TST + +P Sbjct: 369 TPPPPASTSSTGTSSSPLLSTSTSCTTSTSIP 400 >SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccharomyces pombe|chr 2|||Manual Length = 809 Score = 25.4 bits (53), Expect = 5.4 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 233 NEAESNVND-LVSEYQQYQDATAEDDTEFDQEDMEELAQDE 352 NE ES+ + +VS Y + D +DD D+E + D+ Sbjct: 587 NEVESSSGENIVSMYTGHSDLNDDDDDYQDEESYSYASDDD 627 >SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual Length = 4717 Score = 25.4 bits (53), Expect = 5.4 Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 7/53 (13%) Frame = +2 Query: 215 MDEMEFNEAESNVNDLVSE----YQQYQDATAEDDT---EFDQEDMEELAQDE 352 +++M+ A+ N + +E Q ++D E++T + Q+D +LA+D+ Sbjct: 4105 LEDMDMEAADENKEEADAEKDEPMQDFEDPLEENNTLDEDIQQDDFSDLAEDD 4157 Score = 25.0 bits (52), Expect = 7.2 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = +2 Query: 221 EMEFNE--AESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQD 349 E + NE A +N +DLVS+ + + ED ++ED EE++ D Sbjct: 4016 EQKSNEQSAANNESDLVSK--EDDNKALEDKDRQEKEDEEEMSDD 4058 >SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizosaccharomyces pombe|chr 2|||Manual Length = 872 Score = 25.4 bits (53), Expect = 5.4 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +2 Query: 116 NTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDE 223 N++ IQ L K I+ + +R ++ Y+G G+DE Sbjct: 193 NSSEIQALEKSINTFTTYQYRAPEMINLYSGLGIDE 228 >SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 860 Score = 25.0 bits (52), Expect = 7.2 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +2 Query: 218 DEMEFN-EAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQ 346 +E F+ EA +NDL +E QQ + E + + EELA+ Sbjct: 490 NEKRFDKEASGRINDLRAEQQQIMLEARQKAIERRRNEEEELAR 533 >SPAC13F5.01c |msh1|SPAC23C11.18c|MutS protein homolog 1|Schizosaccharomyces pombe|chr 1|||Manual Length = 941 Score = 25.0 bits (52), Expect = 7.2 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = +2 Query: 233 NEAESNVNDLVSEYQ-QYQDATAEDDTEFDQEDMEELAQDEH 355 +E + +N+ V E Q E++TE ++ EE+ QDE+ Sbjct: 482 DELKQLINNAVDENALMKQKINEEEETEVIAQEAEEILQDEN 523 >SPBC409.19c |||metaxin|Schizosaccharomyces pombe|chr 2|||Manual Length = 450 Score = 24.6 bits (51), Expect = 9.5 Identities = 10/32 (31%), Positives = 21/32 (65%) Frame = +2 Query: 254 NDLVSEYQQYQDATAEDDTEFDQEDMEELAQD 349 ++++ E Y D +DD EFD +D+++L ++ Sbjct: 420 DEIMDEEFGYDD---DDDEEFDLDDLDDLEEE 448 >SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe|chr 2|||Manual Length = 959 Score = 24.6 bits (51), Expect = 9.5 Identities = 13/45 (28%), Positives = 24/45 (53%) Frame = +2 Query: 218 DEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDE 352 D ++ E+ + + + + +DA E TE D++D EE+ DE Sbjct: 659 DVLKAKESVKDSEGMFAGEEVEEDAFGE--TEMDEDDFEEIDTDE 701 >SPAC227.02c |||rRNA processing protein Rrp15 |Schizosaccharomyces pombe|chr 1|||Manual Length = 205 Score = 24.6 bits (51), Expect = 9.5 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +2 Query: 239 AESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD 361 +E + DL SE + YQ ++ED E ++E E D+ D Sbjct: 35 SEEELEDLNSEDEFYQSNSSED--EIEEEVQESTIADDIAD 73 >SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosaccharomyces pombe|chr 1|||Manual Length = 639 Score = 24.6 bits (51), Expect = 9.5 Identities = 8/41 (19%), Positives = 23/41 (56%) Frame = +2 Query: 41 IPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQF 163 +P V ++ ++PP+ ++ ++ G +++F+ E+F Sbjct: 591 VPRQVFASMLNLPPEVIRRKGSWTGKKDPREDMFRSRFEKF 631 >SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 349 Score = 24.6 bits (51), Expect = 9.5 Identities = 19/68 (27%), Positives = 30/68 (44%) Frame = +3 Query: 72 TSRLKASRCPRHSSVTPQPSRSCLREYQSSSPLCSDARLSCTGTPARAWTRWNSTRRRAM 251 +S L +S SS TP + S SSS S + S + + +R+ +R S R + Sbjct: 125 SSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRTTSHRTTSH 184 Query: 252 SMIWFRNT 275 +R T Sbjct: 185 KSSSYRPT 192 >SPCC777.08c |||HbrB family protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 422 Score = 24.6 bits (51), Expect = 9.5 Identities = 8/22 (36%), Positives = 14/22 (63%) Frame = +2 Query: 2 SIQNKNSSYFVEWIPNNVKTAV 67 S + +S+ + WIP N KT++ Sbjct: 6 SFSSTSSASSINWIPKNTKTSI 27 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,150,385 Number of Sequences: 5004 Number of extensions: 44347 Number of successful extensions: 207 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 188 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 204 length of database: 2,362,478 effective HSP length: 68 effective length of database: 2,022,206 effective search space used: 222442660 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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