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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_L07
         (538 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces...   182   4e-47
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar...    83   3e-17
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch...    82   6e-17
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|...    56   4e-09
SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces p...    27   1.8  
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc...    27   2.3  
SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyce...    27   2.3  
SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom...    27   2.3  
SPBC13E7.06 |msd1|mug172|spindle pole body protein Msd1|Schizosa...    26   3.1  
SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharo...    26   3.1  
SPAC343.08c |mrp17||mitochondrial ribosomal protein subunit Mrp1...    26   3.1  
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa...    26   3.1  
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    26   4.1  
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha...    25   5.4  
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual        25   5.4  
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos...    25   5.4  
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||...    25   7.2  
SPAC13F5.01c |msh1|SPAC23C11.18c|MutS protein homolog 1|Schizosa...    25   7.2  
SPBC409.19c |||metaxin|Schizosaccharomyces pombe|chr 2|||Manual        25   9.5  
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe...    25   9.5  
SPAC227.02c |||rRNA processing protein Rrp15 |Schizosaccharomyce...    25   9.5  
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa...    25   9.5  
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe...    25   9.5  
SPCC777.08c |||HbrB family protein|Schizosaccharomyces pombe|chr...    25   9.5  

>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 448

 Score =  182 bits (442), Expect = 4e-47
 Identities = 81/113 (71%), Positives = 99/113 (87%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRR 181
           S+Q KNS+YFVEWIP+NV  AVC +PPK LKMS+TFIGN+T+IQE+F+R+ +QFSAMFRR
Sbjct: 332 SVQTKNSAYFVEWIPDNVLKAVCSVPPKDLKMSATFIGNSTSIQEIFRRLGDQFSAMFRR 391

Query: 182 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDA-TAEDDTEFDQEDMEE 337
           KAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQ+A   E D +++ E+ +E
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGIDEGDEDYEIEEEKE 444


>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
           2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 449

 Score = 82.6 bits (195), Expect = 3e-17
 Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
 Frame = +2

Query: 2   SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSST--------FIGNTTAIQELFKRISE 157
           +I+ K +  FV+W P   K  +CD PP+ ++ S           + NTT+I E + R+  
Sbjct: 334 TIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDH 393

Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDD 307
           +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  +Y++    + E D
Sbjct: 394 KFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDSMEVD 443


>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 455

 Score = 81.8 bits (193), Expect = 6e-17
 Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
 Frame = +2

Query: 2   SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSST--------FIGNTTAIQELFKRISE 157
           SI+++ +  FV+W P   K  +C  PP+ +  S           + NTT+I E + R+  
Sbjct: 338 SIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDH 397

Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQY-QDATAEDDTEFDQE 325
           +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  +Y++  QD+   +  E D+E
Sbjct: 398 KFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDSMDNEMYEADEE 454


>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 446

 Score = 55.6 bits (128), Expect = 4e-09
 Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
 Frame = +2

Query: 5   IQNKNSSYFVEWIPNNVKTAVCDIPP---KGLKMSSTFIGNTTAIQELFKRISEQFSAMF 175
           I+ +  + F+ W P +++ A+    P      ++S   + N T+I  LFKR  +Q+  + 
Sbjct: 340 IRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGLMLANHTSIASLFKRTLDQYDRLR 399

Query: 176 RRKAFLHWYTGEGMDEMEFNEAESN---VNDLVSEYQQYQD 289
           +R AFL  Y  E + E + NE +S+   V DL++EY+  +D
Sbjct: 400 KRNAFLEQYKKEAIFEDDLNEFDSSRDVVADLINEYEACED 440


>SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1040

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +2

Query: 359 D*IGSIPPIYEILLLKNMVNKYFIV 433
           D I ++ PI+++L+LKN + K F+V
Sbjct: 337 DSIPNLGPIHDLLVLKNDIEKSFLV 361


>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
            Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1958

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 110  IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQ 286
            + N   +  L+K + E+FS +F RK  L WY   G+      E + N+N   SE  + Q
Sbjct: 1703 LNNPHLLFTLYKLL-ERFSLIFLRKCALLWYCRYGVS----FETQPNLNFQNSELSRLQ 1756


>SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 512

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +2

Query: 254 NDLVSEYQQ--YQDATAEDDTEFDQEDMEELAQDE 352
           NDL  E QQ     A  ++D E D+E  E L++DE
Sbjct: 445 NDLADETQQTLLTSALDDEDEEGDEEMEEALSEDE 479


>SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 592

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 207 ARAWTRWNSTRRRAMSMIWFRNTSSTRTRPLKMTRNL 317
           A ++  W+S R+RA+  I F N  S   + +++  +L
Sbjct: 424 ASSFNVWSSVRKRAIETIEFFNPDSYNVKKIRLLNDL 460


>SPBC13E7.06 |msd1|mug172|spindle pole body protein
           Msd1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 331

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -2

Query: 255 LTLLSASLNSISSMPSPVYQCKKALRLNIAENCSDILLNS 136
           LT LS +LNS+  M SP+Y+   +    + E  + ILL++
Sbjct: 234 LTCLSGTLNSLVEMLSPLYERPNSNPFEVCE-LNAILLDA 272


>SPAPB8E5.07c |||ribosome biogenesis protein
           Rrp12|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1163

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +3

Query: 213 AWTRWNSTRRRAMSMIWF--RNTSSTRTRPLKMTRNLTR 323
           +WT  NS +     +++F   NT  TR R L++  N+ +
Sbjct: 131 SWTHGNSCKTSIYILLFFALSNTEKTRVRSLQILANILK 169


>SPAC343.08c |mrp17||mitochondrial ribosomal protein subunit
           Mrp17|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 109

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 12/44 (27%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = -2

Query: 183 LRLNIAENCSDILLNSSWMAV-VLPMNVEDILRPLGGMSHTAVF 55
           L +NIA+NC   +L++  + V V  M ++++ +P+  ++ +  F
Sbjct: 22  LAMNIAKNCGRAILDNKGVVVDVESMGLKELAKPIKKLNQSYSF 65


>SPAC23C4.19 |spt5||transcription elongation factor
           Spt5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 990

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +2

Query: 206 GEGMDEMEFNEAESN--VNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDE 352
           GE  +E E +   +N    D  +  +  ++A A ++ E D+ED EE  +DE
Sbjct: 77  GEDGNENEVDNVNNNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDEEDE 127


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 30/92 (32%), Positives = 38/92 (41%)
 Frame = +3

Query: 108 SSVTPQPSRSCLREYQSSSPLCSDARLSCTGTPARAWTRWNSTRRRAMSMIWFRNTSSTR 287
           S+ TP P  S      SSSPL S +  SCT T        NST       +   +TSST 
Sbjct: 312 STSTPPPPASTSSTGTSSSPLPSTS-TSCT-TSTSIPPTGNST-TPVTPTVPPTSTSSTS 368

Query: 288 TRPLKMTRNLTRKIWRSSLKTSTMIKSVLYLP 383
           T P   + + T       L TST   +   +P
Sbjct: 369 TPPPPASTSSTGTSSSPLLSTSTSCTTSTSIP 400


>SPBC609.03 |||WD repeat protein, human IQWD1
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 809

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 233 NEAESNVND-LVSEYQQYQDATAEDDTEFDQEDMEELAQDE 352
           NE ES+  + +VS Y  + D   +DD   D+E     + D+
Sbjct: 587 NEVESSSGENIVSMYTGHSDLNDDDDDYQDEESYSYASDDD 627


>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 4717

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
 Frame = +2

Query: 215  MDEMEFNEAESNVNDLVSE----YQQYQDATAEDDT---EFDQEDMEELAQDE 352
            +++M+   A+ N  +  +E     Q ++D   E++T   +  Q+D  +LA+D+
Sbjct: 4105 LEDMDMEAADENKEEADAEKDEPMQDFEDPLEENNTLDEDIQQDDFSDLAEDD 4157



 Score = 25.0 bits (52), Expect = 7.2
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +2

Query: 221  EMEFNE--AESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQD 349
            E + NE  A +N +DLVS+  +  +   ED    ++ED EE++ D
Sbjct: 4016 EQKSNEQSAANNESDLVSK--EDDNKALEDKDRQEKEDEEEMSDD 4058


>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
           Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 872

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 116 NTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDE 223
           N++ IQ L K I+   +  +R    ++ Y+G G+DE
Sbjct: 193 NSSEIQALEKSINTFTTYQYRAPEMINLYSGLGIDE 228


>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 860

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 218 DEMEFN-EAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQ 346
           +E  F+ EA   +NDL +E QQ      +   E  + + EELA+
Sbjct: 490 NEKRFDKEASGRINDLRAEQQQIMLEARQKAIERRRNEEEELAR 533


>SPAC13F5.01c |msh1|SPAC23C11.18c|MutS protein homolog
           1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 941

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +2

Query: 233 NEAESNVNDLVSEYQ-QYQDATAEDDTEFDQEDMEELAQDEH 355
           +E +  +N+ V E     Q    E++TE   ++ EE+ QDE+
Sbjct: 482 DELKQLINNAVDENALMKQKINEEEETEVIAQEAEEILQDEN 523


>SPBC409.19c |||metaxin|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 450

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +2

Query: 254 NDLVSEYQQYQDATAEDDTEFDQEDMEELAQD 349
           ++++ E   Y D   +DD EFD +D+++L ++
Sbjct: 420 DEIMDEEFGYDD---DDDEEFDLDDLDDLEEE 448


>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 959

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +2

Query: 218 DEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDE 352
           D ++  E+  +   + +  +  +DA  E  TE D++D EE+  DE
Sbjct: 659 DVLKAKESVKDSEGMFAGEEVEEDAFGE--TEMDEDDFEEIDTDE 701


>SPAC227.02c |||rRNA processing protein Rrp15 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 205

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 239 AESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD 361
           +E  + DL SE + YQ  ++ED  E ++E  E    D+  D
Sbjct: 35  SEEELEDLNSEDEFYQSNSSED--EIEEEVQESTIADDIAD 73


>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 639

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 8/41 (19%), Positives = 23/41 (56%)
 Frame = +2

Query: 41  IPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQF 163
           +P  V  ++ ++PP+ ++   ++ G     +++F+   E+F
Sbjct: 591 VPRQVFASMLNLPPEVIRRKGSWTGKKDPREDMFRSRFEKF 631


>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 349

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = +3

Query: 72  TSRLKASRCPRHSSVTPQPSRSCLREYQSSSPLCSDARLSCTGTPARAWTRWNSTRRRAM 251
           +S L +S     SS TP  + S      SSS   S +  S + + +R+ +R  S R  + 
Sbjct: 125 SSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRTTSHRTTSH 184

Query: 252 SMIWFRNT 275
               +R T
Sbjct: 185 KSSSYRPT 192


>SPCC777.08c |||HbrB family protein|Schizosaccharomyces pombe|chr
          3|||Manual
          Length = 422

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 2  SIQNKNSSYFVEWIPNNVKTAV 67
          S  + +S+  + WIP N KT++
Sbjct: 6  SFSSTSSASSINWIPKNTKTSI 27


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,150,385
Number of Sequences: 5004
Number of extensions: 44347
Number of successful extensions: 207
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 222442660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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