Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_L07
(538 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 217 5e-57
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 217 5e-57
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 217 5e-57
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 189 1e-48
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 188 2e-48
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 128 2e-38
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 141 3e-34
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 4e-15
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 77 1e-14
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 3e-14
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 3e-14
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 75 3e-14
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 4e-14
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 75 4e-14
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 75 4e-14
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 75 4e-14
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 1e-13
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 73 1e-13
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 71 6e-13
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 69 2e-12
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 63 2e-10
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 59 2e-09
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 9e-07
SB_37070| Best HMM Match : Vicilin_N (HMM E-Value=4.8) 33 0.15
SB_48462| Best HMM Match : zf-C2H2 (HMM E-Value=1.1e-18) 32 0.34
SB_47086| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_45838| Best HMM Match : Sigma70_r1_1 (HMM E-Value=2.6) 31 0.45
SB_6617| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.45
SB_46547| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_8666| Best HMM Match : Flagellar_rod (HMM E-Value=2.5) 28 4.2
SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_56074| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10) 27 7.3
SB_43492| Best HMM Match : Extensin_2 (HMM E-Value=0.34) 27 7.3
SB_42316| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_23611| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_59790| Best HMM Match : VWA (HMM E-Value=0) 27 9.7
SB_41099| Best HMM Match : VWA (HMM E-Value=0) 27 9.7
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 27 9.7
SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 9.7
SB_21264| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 217 bits (530), Expect = 5e-57
Identities = 97/111 (87%), Positives = 108/111 (97%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRR 181
++QNKNSSYFVEWIPNNVKTAVCDIPP+GLKMS+TFIGN+TAIQELFKRISEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 391
Query: 182 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDME 334
KAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQDATAE++ EFD+E+ E
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEEEE 442
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 217 bits (530), Expect = 5e-57
Identities = 97/111 (87%), Positives = 108/111 (97%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRR 181
++QNKNSSYFVEWIPNNVKTAVCDIPP+GLKMS+TFIGN+TAIQELFKRISEQF+AMFRR
Sbjct: 277 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 336
Query: 182 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDME 334
KAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQDATAE++ EFD+E+ E
Sbjct: 337 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEEEE 387
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 217 bits (530), Expect = 5e-57
Identities = 97/111 (87%), Positives = 108/111 (97%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRR 181
++QNKNSSYFVEWIPNNVKTAVCDIPP+GLKMS+TFIGN+TAIQELFKRISEQF+AMFRR
Sbjct: 332 NVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 391
Query: 182 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDME 334
KAFLHWYTGEGMDEMEF EAESN+NDLVSEYQQYQDATAE++ EFD+E+ E
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEEEE 442
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 189 bits (460), Expect = 1e-48
Identities = 82/111 (73%), Positives = 98/111 (88%)
Frame = +2
Query: 8 QNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKA 187
QNKNS +FVEWIPNNVKT VCDI PKGLKM++TF+GN TAIQELFKR+ EQF+AMFRRKA
Sbjct: 161 QNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQFTAMFRRKA 220
Query: 188 FLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEEL 340
FLHWYTGEGMDEMEF EAESN++DL++EYQQYQ+A A+ + E E++ E+
Sbjct: 221 FLHWYTGEGMDEMEFTEAESNMHDLIAEYQQYQEAEADIEGEVSDEELPEV 271
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 188 bits (459), Expect = 2e-48
Identities = 82/110 (74%), Positives = 97/110 (88%)
Frame = +2
Query: 8 QNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKA 187
QNKNS +FVEWIPNNVKT VCDI PKGLKM++TF+GN TAIQELFKR+ EQF+AMFRRKA
Sbjct: 99 QNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQFTAMFRRKA 158
Query: 188 FLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEE 337
FLHWYTGEGMDEMEF EAESN++DL++EYQQYQ+A A+ + E E++ E
Sbjct: 159 FLHWYTGEGMDEMEFTEAESNMHDLIAEYQQYQEAEADIEGEVSDEELPE 208
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 128 bits (310), Expect(2) = 2e-38
Identities = 55/81 (67%), Positives = 69/81 (85%)
Frame = +2
Query: 8 QNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKA 187
Q+ +SS FVEWIPNN+KTAVCD+PP GLK ++TF+ N+TAIQE F+R +EQF+AMFRR+A
Sbjct: 153 QDSHSSSFVEWIPNNMKTAVCDVPPVGLKNAATFLYNSTAIQEAFRRFTEQFAAMFRRRA 212
Query: 188 FLHWYTGEGMDEMEFNEAESN 250
FLHWYT EGMD +EF E + N
Sbjct: 213 FLHWYTTEGMDPLEFTEIKRN 233
Score = 48.4 bits (110), Expect(2) = 2e-38
Identities = 21/38 (55%), Positives = 30/38 (78%), Gaps = 2/38 (5%)
Frame = +2
Query: 239 AESNVNDLVSEYQQYQDATAEDD--TEFDQEDMEELAQ 346
A+SN+NDL+SEYQQY+DA ++DD T D+E+ EE +
Sbjct: 259 ADSNLNDLISEYQQYEDAKSDDDVITASDEEEAEEFVE 296
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 141 bits (342), Expect = 3e-34
Identities = 65/118 (55%), Positives = 86/118 (72%)
Frame = +2
Query: 8 QNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKA 187
Q++ SS FV+WIPNN K AVCD+PP +KMS++ I + TAIQELFKRI + MFRR+A
Sbjct: 239 QDRYSSLFVDWIPNNGKVAVCDVPPHDMKMSASCISSNTAIQELFKRIRLHYKLMFRRRA 298
Query: 188 FLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD 361
FLHWYT EGMD +F EA++++ DL+S YQQ +D AED FD ED++ + +E D
Sbjct: 299 FLHWYTEEGMDSQQFEEADNDILDLISTYQQCEDMKAEDC--FDDEDIKLIEFEEFED 354
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 78.2 bits (184), Expect = 4e-15
Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + + NTTAI E + R+
Sbjct: 750 TIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 809
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQ 322
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ + E+D E ++
Sbjct: 810 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVAVESVEEDEEEEE 864
Score = 72.9 bits (171), Expect = 1e-13
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + + NTTAI E + R+
Sbjct: 319 TIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 378
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQ 280
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 379 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 419
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 76.6 bits (180), Expect = 1e-14
Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 8/117 (6%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + + NTTAI E + R+
Sbjct: 919 TIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 978
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQED 328
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ + E++ E + E+
Sbjct: 979 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEEEGEEEGEE 1035
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 75.4 bits (177), Expect = 3e-14
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + + NTTAI E + R+
Sbjct: 1114 TIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 1173
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQED 328
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ + E + E + E+
Sbjct: 1174 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEEGEE 1230
Score = 72.9 bits (171), Expect = 1e-13
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + + NTTAI E + R+
Sbjct: 705 TIKTKKTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 764
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQ 280
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 765 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 805
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 75.4 bits (177), Expect = 3e-14
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 9/118 (7%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + + NTTAI E + R+
Sbjct: 334 TIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 393
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQY-QDATAEDDTEFDQED 328
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ D+ E + E + E+
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEEGEEEEEGEE 451
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 75.4 bits (177), Expect = 3e-14
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + + NTTAI E + R+
Sbjct: 334 TIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 393
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQED 328
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ + E + E + E+
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEEGEE 450
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 74.9 bits (176), Expect = 4e-14
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + + NTTAI E + R+
Sbjct: 271 TIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 330
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEE 337
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ + E + E +E+ EE
Sbjct: 331 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGE--EEEGEE 388
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 74.9 bits (176), Expect = 4e-14
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + + NTTAI E + R+
Sbjct: 767 TIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 826
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEE 337
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ + E + E +E+ EE
Sbjct: 827 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGE--EEEGEE 884
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + + NTTA+ E + R+
Sbjct: 334 TIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDH 393
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQ 280
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 74.9 bits (176), Expect = 4e-14
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + + NTTAI E + R+
Sbjct: 259 TIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 318
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEE 337
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ + E + E +E+ EE
Sbjct: 319 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGE--EEEGEE 376
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 74.9 bits (176), Expect = 4e-14
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + + NTTAI E + R+
Sbjct: 132 TIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 191
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEE 337
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ + E + E +E+ EE
Sbjct: 192 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGE--EEEGEE 249
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 73.3 bits (172), Expect = 1e-13
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + + NTTAI E + R+
Sbjct: 299 TIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 358
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQY-QDATAEDDTEFDQED 328
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ D+ + + E E+
Sbjct: 359 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVGDGEDEDGGEE 416
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 72.9 bits (171), Expect = 1e-13
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPK--------GLKMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + PP ++ + + NTTAI E + R+
Sbjct: 318 TIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 377
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQ 280
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 378 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 418
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 70.9 bits (166), Expect = 6e-13
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGL--------KMSSTFIGNTTAIQELFKRISE 157
+I+ K + FV+W P K + P + + S + NTTAI + + R++
Sbjct: 132 TIKTKRTIQFVDWCPTGFKVGINYQQPTAVPGGDLAKVQRSVCMLSNTTAIADAWARLNH 191
Query: 158 QFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQ 280
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 192 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/73 (39%), Positives = 49/73 (67%)
Frame = +2
Query: 110 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQD 289
+ NTTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 530 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV-G 588
Query: 290 ATAEDDTEFDQED 328
A + DD+ D+++
Sbjct: 589 ADSPDDSVVDEDE 601
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 68.9 bits (161), Expect = 2e-12
Identities = 28/80 (35%), Positives = 52/80 (65%)
Frame = +2
Query: 89 LKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVS 268
++ S + NTTAI + + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 69 VQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 128
Query: 269 EYQQYQDATAEDDTEFDQED 328
+Y++ + ++D E + E+
Sbjct: 129 DYEEVGVDSVDNDGETEAEE 148
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 SIQNKNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRR 181
+I+ K + F +W P K + PP + I E + R+ +F M+ +
Sbjct: 259 TIRPKRTFQFGDWCPTGFKVGINSQPPTVVPGGDL----AKPIAEAWARLDHKFDLMYAK 314
Query: 182 KAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQY-QDATAEDDTEFDQED 328
+AF+HWY GEGM+E EF+EA ++ L +Y++ D+ + + E E+
Sbjct: 315 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVGDGEDEDGGEE 364
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +2
Query: 14 KNSSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFL 193
K S F+ W KT +C +PP G S + N + I+ F + ++F +++RKA +
Sbjct: 383 KPSLKFIHWNQEGWKTGLCSVPPVGQPYSLLTLANNSCIKNTFVELKDRFMKLYKRKAHV 442
Query: 194 HWYTG-EGMDEMEFNEAESNVNDLVSEY 274
H YT +G++ +F++ +++ L+ EY
Sbjct: 443 HHYTHVDGLEVGQFDDGLESLSWLIQEY 470
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 50.4 bits (115), Expect = 9e-07
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = +2
Query: 173 FRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQED 328
+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ + E + E D E+
Sbjct: 13 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEDDEE 64
>SB_37070| Best HMM Match : Vicilin_N (HMM E-Value=4.8)
Length = 319
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/65 (24%), Positives = 35/65 (53%)
Frame = +2
Query: 215 MDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD*IGSIPPIYEI 394
+ ++ F++ ++ + YQ+ Q+ E++ E +E+MEE +QD+ + P E
Sbjct: 167 LSQLMFSKYDAEKTQWIYNYQREQEREMEEEEEDSEEEMEEDSQDKPGNPFKGTPTEEEK 226
Query: 395 LLLKN 409
+L+N
Sbjct: 227 EMLRN 231
>SB_48462| Best HMM Match : zf-C2H2 (HMM E-Value=1.1e-18)
Length = 536
Score = 31.9 bits (69), Expect = 0.34
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 209 EGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQED 328
E + + E E++ N ++ E Q +QD +EDD+E + E+
Sbjct: 15 EDLSDEESIESDGNCSNFSDELQNFQDDDSEDDSENEDEE 54
>SB_47086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 31.9 bits (69), Expect = 0.34
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +3
Query: 177 DARLSCTGTPARAWTRWNSTRRRAMSMIWFRNTSSTRTRPLKMTRNLT-----RKIWRSS 341
D L T AR TR N+TR+ S + RN+S T P+++T T + R+
Sbjct: 249 DCHLFNLSTTARPITRSNTTRQEHNSGVDCRNSSCT---PIEVTETSTLEKSANTLSRAG 305
Query: 342 LKTSTMIKSVLYLPSMKSCYLR 407
++ ++ + ++L M C+LR
Sbjct: 306 FLSAAILTAAVFLIVMCCCFLR 327
>SB_45838| Best HMM Match : Sigma70_r1_1 (HMM E-Value=2.6)
Length = 166
Score = 31.5 bits (68), Expect = 0.45
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +2
Query: 107 FIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVND---LVSEYQ 277
F+G + ++ I + + RR L E + ++ +ND LV+E
Sbjct: 73 FVGFGKLYEAQYRMIKNRITHAIRRVGPLTLEKLEETFKADWELIRLLLNDMIKLVNEDS 132
Query: 278 QYQDAT-AEDDTEFDQEDMEELAQDEHH 358
+ Q A AE +TE ++E+ +++A DEHH
Sbjct: 133 EKQAARDAESETENEEENYQDIAFDEHH 160
>SB_6617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 31.5 bits (68), Expect = 0.45
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +3
Query: 48 IT*RPPCVTSRLKASRCPRHSSVTPQPSRSCLREYQSSSPLCSDARLSCTGTPAR 212
+T PPC+TS A P +S+T R CL S+ P ++ T P R
Sbjct: 171 LTDPPPCLTSITSADPRPCLTSITSTDPRPCLTSITSTDPQPCLTGINTTEPPPR 225
>SB_46547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1058
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -1
Query: 484 TKRIYKRRHPAMRGMKHNYEILIYHILK*QDFIDGRYRTDLIM 356
TK R +RG+K N E I ++L+ +DF+DG TD I+
Sbjct: 383 TKLHRSLREFRVRGVKTNTEF-IRNVLQHKDFLDGHVTTDFIL 424
>SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 209 EGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDE 352
E +EM E + + + + ++ E D E D+ED EE+ Q+E
Sbjct: 127 EDKEEMGKGEMDKEDKEEMDQEMDKEEMDQEMDKEMDKEDKEEMDQEE 174
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 209 EGMDEMEFN-EAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDE 352
E MD+ E + E + + ++ E +D D E D+ED EE+ + E
Sbjct: 88 EEMDQEEMDKEDKEDKEEMDQEEMDKEDKEEMDKEEMDKEDKEEMGKGE 136
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 209 EGMDEM--EFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDE 352
E MD+ E E + ++ E ++ ED E D+ED EE+ Q+E
Sbjct: 35 EEMDKQDKENKEDKEEMDKEDKEEMDQEEMDKEDKEEMDKEDKEEMDQEE 84
>SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 21 HRTSWNGSRIT*RPPCVTSRLKASRCPRHSSVTP----QPSRSCLREYQSSSP 167
H+ ++ S IT + P + LKA+ P HS T QPS S +YQ P
Sbjct: 327 HKNPYHQSSITQQAP-KAAELKAAHPPSHSPQTQPPDRQPSASLPAQYQGQQP 378
>SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2309
Score = 28.7 bits (61), Expect = 3.2
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 116 NTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQ-YQDA 292
NTT++ E+F E+ SA F FL TG + + E V V +Q+
Sbjct: 2166 NTTSLAEMFGSKKEESSASF---LFLGNTTGSDEESPAKDIGEMEVLHKVGWHQEKLPYD 2222
Query: 293 TAEDDTEFDQEDMEELAQD 349
++ DD E ++E+ ++L Q+
Sbjct: 2223 SSSDDEEEEKEEEKDLKQE 2241
>SB_8666| Best HMM Match : Flagellar_rod (HMM E-Value=2.5)
Length = 895
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 218 DEMEFNEAESNVNDLVSEY---QQYQDATAEDDTEFDQEDMEELAQDEH 355
DE + NEA+S N ++ ++ + +D + D + +EELAQ+ H
Sbjct: 74 DEDDTNEADSRSNPDELQFMTTEEIAEVLRKDRPDIDDDFLEELAQEMH 122
>SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +3
Query: 18 THRTSWNGSRIT*RPPCVTSRLKASRCPRHSSVTPQPSRSCLREYQSSSPLCSDARLSCT 197
TH TS+ T C TS +S TP PS +C Y S++ S + T
Sbjct: 21 THTTSYTS---TPSYTCTTSYTSTPSYTSTTSYTPTPSYTCTTSYTSTTSYTSTTSYTPT 77
Query: 198 G--TPARAWT 221
TP ++T
Sbjct: 78 TSYTPTTSYT 87
>SB_56074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 27.9 bits (59), Expect = 5.6
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +3
Query: 120 PQPSRSCLREYQSSSPLCSDARLSCTGTPARAWTRWNSTRRR---AMSMIWFRNTSSTRT 290
P P C R +++ CS A ++ +RA N+ R A + + R T +T T
Sbjct: 142 PWPPIQCSRATMATNTKCSRATMATNTKYSRATMATNTKCSRATMATNTKYSRATMATNT 201
Query: 291 RPLKMTRNLTRKIWRSSLKTST 356
+ + T K R+++ T+T
Sbjct: 202 KYSRATMATNTKCSRATMATNT 223
>SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10)
Length = 282
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 236 EAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD 361
EAE +D E +D +DD E D+E+ + +DE D
Sbjct: 189 EAEEASSDEDEEEDSDEDDDEDDDDEDDEEEEDSDEEDESED 230
>SB_43492| Best HMM Match : Extensin_2 (HMM E-Value=0.34)
Length = 272
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 368 RFNHGARLERAPPYLPGQIPCHLQRSRPGTAGIPKP 261
R++ G R + PP+ + P RS GTA P P
Sbjct: 33 RYSRGHRKSQIPPWTRARSPVDRARSPRGTAPEPDP 68
>SB_42316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.5 bits (58), Expect = 7.3
Identities = 19/88 (21%), Positives = 36/88 (40%)
Frame = +2
Query: 98 SSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQ 277
++T++ A E+ K + F K F + +G + + N+ ND V
Sbjct: 618 AATYMTGQLAFWEIRKEAKARLGDKFNMKDFHYHLLSQGEGDDKNND--DGGNDDVDSDD 675
Query: 278 QYQDATAEDDTEFDQEDMEELAQDEHHD 361
+ D +DD D +++ D+H D
Sbjct: 676 GHDDNDNDDDGNDDDYGDDDVDDDDHVD 703
>SB_23611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +2
Query: 245 SNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDE 352
S+ +D + ++ +D T EDD + ++ED +E +DE
Sbjct: 2 SDSDDALLSDEEGEDITREDDDDEEEEDDDEDFEDE 37
>SB_59790| Best HMM Match : VWA (HMM E-Value=0)
Length = 4151
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 358 MVLVLSELLHIFLVKFRVIFSGRVLV 281
+ LV S+ H+F +FR I GR++V
Sbjct: 31 LTLVASDRKHVFTTRFRSIAMGRLMV 56
>SB_41099| Best HMM Match : VWA (HMM E-Value=0)
Length = 3373
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 358 MVLVLSELLHIFLVKFRVIFSGRVLV 281
+ LV S+ H+F +FR I GR++V
Sbjct: 3335 LTLVASDRKHVFTTRFRSIAMGRLMV 3360
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +2
Query: 98 SSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVN 256
S T N+ ++ I + +MF A+LHW+ G + F N N
Sbjct: 461 SLTLCTNSNRARDSLGNILTRAKSMFDAGAYLHWFEKHGCVKPSFRHYLENPN 513
>SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 757
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +2
Query: 236 EAESNVNDLVSEY---QQYQDATAEDDTEFDQEDMEELAQDEHH 358
E E VNDLV E ++ +D EDD +E+ E+ D H
Sbjct: 147 EDEEKVNDLVIEEVKDEKEEDDDDEDDVLLGKEEEREVTDDYMH 190
>SB_21264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 209 EGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDE 352
E M+EM+ E + + + + ++ +D + DQEDMEE ++E
Sbjct: 31 EDMEEMDKEEMDQQDKEEMDQ----EEMDKKDKEDMDQEDMEEQDKEE 74
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,060,964
Number of Sequences: 59808
Number of extensions: 349387
Number of successful extensions: 1383
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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